FFCP PHASE1:Hg19::chr12:131201475..131201485,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:131201475..131201485,- | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_at_chr12:131201475..131201485,- | |description=CAGE_peak_at_chr12:131201475..131201485,- | ||
|id=chr12:131201475..131201485,- | |id=chr12:131201475..131201485,- | ||
|ontology_enrichment_celltype=CL:0000946!6.22e-15!1;CL:0000786!6.22e-15!1;CL:0000980!6.22e-15!1;CL:0000945!3.18e-09!24;CL:0000826!3.18e-09!24;CL:0000785!4.09e-08!2;CL:0000955!4.09e-08!2;CL:0000818!4.09e-08!2;CL:0000954!4.09e-08!2;CL:0000816!4.09e-08!2 | |ontology_enrichment_celltype=CL:0000946!6.22e-15!1;CL:0000786!6.22e-15!1;CL:0000980!6.22e-15!1;CL:0000945!3.18e-09!24;CL:0000826!3.18e-09!24;CL:0000785!4.09e-08!2;CL:0000955!4.09e-08!2;CL:0000818!4.09e-08!2;CL:0000954!4.09e-08!2;CL:0000816!4.09e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000946;4.66e-66;1!CL:0000786;4.66e-66;1!CL:0000945;4.20e-12;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,4.66e-66,1;CL:0000786,4.66e-66,1;CL:0000980,4.66e-66,1;CL:0000785,7.05e-34,2;CL:0000955,7.05e-34,2;CL:0000818,7.05e-34,2;CL:0000954,7.05e-34,2;CL:0000816,7.05e-34,2;CL:0000817,4.09e-23,3;CL:0000945,4.20e-12,24;CL:0000826,4.20e-12,24 | |||
|ontology_enrichment_development_v019=CL:0000954;7.05e-34;2!UBERON:0004872;8.16e-11;7 | |||
|ontology_enrichment_disease=DOID:630!5.42e-15!1;DOID:0050177!5.42e-15!1;DOID:0050427!5.42e-15!1;DOID:2355!2.11e-14!1;DOID:74!7.52e-08!2 | |ontology_enrichment_disease=DOID:630!5.42e-15!1;DOID:0050177!5.42e-15!1;DOID:0050427!5.42e-15!1;DOID:2355!2.11e-14!1;DOID:74!7.52e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:630;2.39e-66;1!DOID:0050177;2.39e-66;1!DOID:0050427;2.39e-66;1!DOID:0060058;5.73e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.39e-66,1;DOID:0050177,2.39e-66,1;DOID:0050427,2.39e-66,1;DOID:0060058,5.73e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.46e-21!57;UBERON:0005068!1.46e-21!57;UBERON:0006241!1.46e-21!57;UBERON:0007135!1.46e-21!57;UBERON:0002616!8.27e-21!59;UBERON:0005383!1.24e-18!3;UBERON:0005382!1.24e-18!3;UBERON:0000988!1.77e-18!3;UBERON:0004733!8.24e-18!12;UBERON:0002028!8.24e-18!12;UBERON:0007277!8.24e-18!12;UBERON:0000955!2.01e-17!69;UBERON:0006238!2.01e-17!69;UBERON:0004732!1.82e-16!13;UBERON:0002298!2.00e-15!8;UBERON:0001874!1.07e-14!1;UBERON:0001017!1.47e-14!82;UBERON:0003076!2.58e-14!15;UBERON:0003057!2.58e-14!15;UBERON:0002581!2.75e-14!1;UBERON:0002022!3.15e-14!1;UBERON:0000369!3.16e-14!4;UBERON:0002435!3.16e-14!4;UBERON:0000204!3.16e-14!4;UBERON:0010082!3.16e-14!4;UBERON:0003075!5.09e-14!86;UBERON:0007284!5.09e-14!86;UBERON:0002308!7.04e-14!9;UBERON:0000125!7.04e-14!9;UBERON:0005743!7.56e-14!86;UBERON:0002680!9.57e-14!9;UBERON:0001895!9.57e-14!9;UBERON:0010092!9.57e-14!9;UBERON:0002346!2.35e-13!90;UBERON:0002020!2.85e-13!34;UBERON:0003528!2.85e-13!34;UBERON:0000073!1.85e-12!94;UBERON:0001016!1.85e-12!94;UBERON:0002780!4.99e-11!41;UBERON:0001890!4.99e-11!41;UBERON:0006240!4.99e-11!41;UBERON:0003080!9.16e-11!42;UBERON:0007023!2.49e-10!115;UBERON:0001869!5.87e-10!32;UBERON:0002791!1.16e-09!33;UBERON:0000033!2.07e-09!123;UBERON:0001893!2.19e-09!34;UBERON:0000153!6.34e-09!129;UBERON:0007811!6.34e-09!129;UBERON:0009663!1.59e-08!7;UBERON:0001954!4.38e-08!2;UBERON:0003022!4.38e-08!2;UBERON:0002421!4.38e-08!2;UBERON:0002600!4.38e-08!2;UBERON:0000007!5.02e-08!2;UBERON:0002148!5.74e-08!2;UBERON:0009662!5.74e-08!2;UBERON:0001873!6.58e-08!2;UBERON:0010122!6.58e-08!2;UBERON:0003056!2.30e-07!61;UBERON:0002420!8.10e-07!9;UBERON:0007245!8.10e-07!9;UBERON:0010009!8.10e-07!9;UBERON:0010011!8.10e-07!9;UBERON:0000454!8.10e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.62e-23;3!UBERON:0004177;1.40e-14;5!UBERON:0005057;1.40e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.62e-23,3;UBERON:0004854,2.62e-23,3;UBERON:0009034,2.62e-23,3;UBERON:0002095,2.62e-23,3;UBERON:0004782,2.62e-23,3;UBERON:0003281,2.62e-23,3;UBERON:0009664,2.62e-23,3;UBERON:0002296,2.62e-23,3;UBERON:0005602,2.62e-23,3;UBERON:0001179,2.62e-23,3;UBERON:0006293,2.62e-23,3;UBERON:0004177,8.16e-11,7;UBERON:0005057,8.16e-11,7;UBERON:0000945,1.24e-09,8;UBERON:0010039,1.24e-09,8;UBERON:0004457,7.48e-07,12;UBERON:0000042,7.48e-07,12;UBERON:0003887,7.48e-07,12 | |||
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|short_description=p@chr12:131201475..131201485,- | |short_description=p@chr12:131201475..131201485,- | ||
}} | }} |
Latest revision as of 06:46, 24 July 2015
Short description: | p@chr12:131201475..131201485, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:131201475..131201485, - |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 4.66e-66 | 1 |
plasma cell | 4.66e-66 | 1 |
plasmablast | 4.66e-66 | 1 |
mature B cell | 7.05e-34 | 2 |
pre-B-II cell | 7.05e-34 | 2 |
transitional stage B cell | 7.05e-34 | 2 |
small pre-B-II cell | 7.05e-34 | 2 |
immature B cell | 7.05e-34 | 2 |
precursor B cell | 4.09e-23 | 3 |
lymphocyte of B lineage | 4.20e-12 | 24 |
pro-B cell | 4.20e-12 | 24 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.62e-23 | 3 |
gastrointestinal system mesentery | 2.62e-23 | 3 |
stomach region | 2.62e-23 | 3 |
mesentery | 2.62e-23 | 3 |
gastrointestinal system serosa | 2.62e-23 | 3 |
mesentery of stomach | 2.62e-23 | 3 |
gut mesentery | 2.62e-23 | 3 |
dorsal mesentery | 2.62e-23 | 3 |
dorsal mesogastrium | 2.62e-23 | 3 |
peritoneal cavity | 2.62e-23 | 3 |
spleen primordium | 2.62e-23 | 3 |
hemopoietic organ | 8.16e-11 | 7 |
immune organ | 8.16e-11 | 7 |
stomach | 1.24e-09 | 8 |
food storage organ | 1.24e-09 | 8 |
cavity lining | 7.48e-07 | 12 |
serous membrane | 7.48e-07 | 12 |
intraembryonic coelom | 7.48e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.39e-66 | 1 |
monogenic disease | 2.39e-66 | 1 |
xeroderma pigmentosum | 2.39e-66 | 1 |
lymphoma | 5.73e-08 | 10 |