FFCP PHASE1:Hg19::chr12:13025302..13025313,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:13025302..13025313,+ | |||
|coexpression_cluster_id=C125 | |coexpression_cluster_id=C125 | ||
|description=CAGE_peak_at_chr12:13025302..13025313,+ | |description=CAGE_peak_at_chr12:13025302..13025313,+ | ||
|id=chr12:13025302..13025313,+ | |id=chr12:13025302..13025313,+ | ||
|ontology_enrichment_celltype=CL:1000507!1.65e-07!12;CL:1000494!1.65e-07!12 | |ontology_enrichment_celltype=CL:1000507!1.65e-07!12;CL:1000494!1.65e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000319;7.48e-30;1!CL:0000511;2.37e-29;1!CL:0002625;2.37e-29;1!CL:0000342;2.37e-29;1!CL:0002565;2.37e-29;1!CL:0000216;2.37e-29;1!CL:0000159;1.15e-15;2!CL:0000239;9.90e-11;3!CL:1000615;9.90e-11;3!CL:0002306;9.90e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,7.48e-30,1;CL:0000511,1.78e-29,1;CL:0002625,1.78e-29,1;CL:0000216,1.78e-29,1;CL:0000342,4.20e-29,1;CL:0002565,4.20e-29,1;CL:0000159,1.15e-15,2;CL:0000239,8.17e-11,3;CL:1000615,8.17e-11,3;CL:0002306,8.17e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0009847;7.42e-11;3!UBERON:0003353;7.42e-11;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3030;7.48e-30;1!DOID:4556;9.90e-11;3!DOID:3908;6.04e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,7.48e-30,1;DOID:4556,9.90e-11,3;DOID:3908,6.04e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0003064!8.70e-13!37;UBERON:0002367!3.02e-08!11;UBERON:0010147!3.02e-08!11;UBERON:0009846!3.02e-08!11;UBERON:0003353!3.02e-08!11;UBERON:0004902!3.02e-08!11;UBERON:0003820!3.02e-08!11;UBERON:0009847!3.02e-08!11;UBERON:0004122!4.81e-08!15;UBERON:0009773!1.65e-07!12;UBERON:0001231!1.65e-07!12;UBERON:0004810!1.65e-07!12;UBERON:0003937!1.69e-07!12;UBERON:0005399!1.69e-07!12;UBERON:0001851!2.23e-07!16;UBERON:0005256!6.18e-07!143 | |ontology_enrichment_uberon=UBERON:0003064!8.70e-13!37;UBERON:0002367!3.02e-08!11;UBERON:0010147!3.02e-08!11;UBERON:0009846!3.02e-08!11;UBERON:0003353!3.02e-08!11;UBERON:0004902!3.02e-08!11;UBERON:0003820!3.02e-08!11;UBERON:0009847!3.02e-08!11;UBERON:0004122!4.81e-08!15;UBERON:0009773!1.65e-07!12;UBERON:0001231!1.65e-07!12;UBERON:0004810!1.65e-07!12;UBERON:0003937!1.69e-07!12;UBERON:0005399!1.69e-07!12;UBERON:0001851!2.23e-07!16;UBERON:0005256!6.18e-07!143 | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.37e-29;1!UBERON:0001343;2.37e-29;1!UBERON:0004910;2.37e-29;1!UBERON:0002506;2.37e-29;1!UBERON:0004813;2.37e-29;1!UBERON:0001769;2.37e-29;1!UBERON:0004909;2.05e-15;2!UBERON:0006853;9.90e-11;3!UBERON:0007685;9.90e-11;3!UBERON:0004134;9.90e-11;3!UBERON:0005904;2.26e-08;4!UBERON:0000488;2.26e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.78e-29,1;UBERON:0001343,1.78e-29,1;UBERON:0004910,1.78e-29,1;UBERON:0005154,1.78e-29,1;UBERON:0005295,1.78e-29,1;UBERON:0004813,1.78e-29,1;UBERON:0005297,1.78e-29,1;UBERON:0005294,1.78e-29,1;UBERON:0010141,1.78e-29,1;UBERON:0005891,1.78e-29,1;UBERON:0002506,4.20e-29,1;UBERON:0001769,4.20e-29,1;UBERON:0004909,1.78e-15,2;UBERON:0006853,8.17e-11,3;UBERON:0007685,8.17e-11,3;UBERON:0004134,8.17e-11,3;UBERON:0004122,1.42e-08,15;UBERON:0005904,2.11e-08,4;UBERON:0000488,2.61e-08,4 | |||
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| ||
|short_description=p@chr12:13025302..13025313,+ | |short_description=p@chr12:13025302..13025313,+ | ||
}} | }} |
Latest revision as of 06:42, 24 July 2015
Short description: | p@chr12:13025302..13025313, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:13025302..13025313, + |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 7.48e-30 | 1 |
androgen binding protein secreting cell | 1.78e-29 | 1 |
seminiferous tubule epithelial cell | 1.78e-29 | 1 |
Sertoli cell | 1.78e-29 | 1 |
pigment cell (sensu Vertebrata) | 4.20e-29 | 1 |
iris pigment epithelial cell | 4.20e-29 | 1 |
seromucus secreting cell | 1.15e-15 | 2 |
brush border epithelial cell | 8.17e-11 | 3 |
kidney cortex tubule cell | 8.17e-11 | 3 |
epithelial cell of proximal tubule | 8.17e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.78e-29 | 1 |
seminiferous tubule of testis | 1.78e-29 | 1 |
epithelium of male gonad | 1.78e-29 | 1 |
epithelial cord | 1.78e-29 | 1 |
sex cord | 1.78e-29 | 1 |
seminiferous tubule epithelium | 1.78e-29 | 1 |
testis sex cord | 1.78e-29 | 1 |
genital ridge | 1.78e-29 | 1 |
primitive sex cord of indifferent gonad | 1.78e-29 | 1 |
coelomic epithelium | 1.78e-29 | 1 |
iris epithelium | 4.20e-29 | 1 |
iris | 4.20e-29 | 1 |
epithelium of gonad | 1.78e-15 | 2 |
renal cortex tubule | 8.17e-11 | 3 |
region of nephron tubule | 8.17e-11 | 3 |
proximal tubule | 8.17e-11 | 3 |
genitourinary system | 1.42e-08 | 15 |
duct of male reproductive system | 2.11e-08 | 4 |
atypical epithelium | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 7.48e-30 | 1 |
lung large cell carcinoma | 9.90e-11 | 3 |
non-small cell lung carcinoma | 6.04e-07 | 5 |