FFCP PHASE1:Hg19::chr12:120801369..120801380,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:120801369..120801380,- | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_at_chr12:120801369..120801380,- | |||
|id=chr12:120801369..120801380,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000243;7.76e-07;15!CL:0000125;7.76e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,8.11e-07,15;CL:0000125,8.11e-07,15;CL:0000030,8.11e-07,15;CL:0000339,8.11e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.81e-34;3!UBERON:0006238;4.52e-10;10!UBERON:0006601;2.40e-07;82!CL:0000339;7.76e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;2.60e-09;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,2.77e-09,11 | |||
|ontology_enrichment_uberon=UBERON:0001905!1.44e-29!2;UBERON:0002757!1.44e-29!2;UBERON:0010134!1.44e-29!2;UBERON:0002784!1.44e-29!2;UBERON:0005408!1.44e-29!2;UBERON:0001899!1.44e-29!2;UBERON:0002146!2.06e-15!1;UBERON:0005623!2.06e-15!1;UBERON:0003296!2.56e-15!4;UBERON:0010133!2.56e-15!4;UBERON:0002336!3.66e-15!1;UBERON:0001018!3.66e-15!1;UBERON:0002473!3.66e-15!1;UBERON:0005340!3.66e-15!1;UBERON:0002316!3.66e-15!1;UBERON:0003544!3.66e-15!1;UBERON:0001020!3.66e-15!1;UBERON:0005970!3.66e-15!1;UBERON:0002437!3.66e-15!1;UBERON:0002346!1.53e-14!90;UBERON:0000966!1.19e-12!5;UBERON:0005388!1.19e-12!5;UBERON:0001802!1.19e-12!5;UBERON:0003075!2.47e-12!86;UBERON:0007284!2.47e-12!86;UBERON:0000970!8.54e-12!20;UBERON:0002104!3.02e-11!21;UBERON:0000073!4.90e-11!94;UBERON:0001016!4.90e-11!94;UBERON:0003056!9.79e-11!61;UBERON:0000924!2.31e-10!173;UBERON:0006601!2.31e-10!173;UBERON:0000020!2.72e-10!23;UBERON:0001032!7.14e-10!24;UBERON:0004456!7.14e-10!24;UBERON:0005743!1.13e-09!86;UBERON:0000955!2.55e-09!69;UBERON:0006238!2.55e-09!69;UBERON:0001894!3.73e-09!7;UBERON:0006222!3.73e-09!7;UBERON:0004121!7.91e-09!169;UBERON:0000033!2.53e-08!123;UBERON:0001954!2.67e-08!2;UBERON:0003022!2.67e-08!2;UBERON:0002421!2.67e-08!2;UBERON:0002600!2.67e-08!2;UBERON:0005162!3.08e-08!2;UBERON:0000122!3.08e-08!2;UBERON:0000153!6.73e-08!129;UBERON:0007811!6.73e-08!129;UBERON:0001017!8.59e-08!82;UBERON:0000019!2.18e-07!19;UBERON:0000047!2.18e-07!19;UBERON:0004088!2.18e-07!19;UBERON:0003072!2.18e-07!19;UBERON:0003071!2.18e-07!19;UBERON:0004128!2.18e-07!19;UBERON:0001456!9.87e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;6.61e-50;2!UBERON:0002757;6.61e-50;2!UBERON:0010134;6.61e-50;2!UBERON:0005408;6.61e-50;2!UBERON:0001899;6.61e-50;2!UBERON:0003296;1.43e-25;4!UBERON:0010133;1.43e-25;4!UBERON:0002784;1.43e-25;4!UBERON:0000966;4.92e-21;5!UBERON:0005388;4.92e-21;5!UBERON:0001802;4.92e-21;5!UBERON:0001894;4.37e-15;7!UBERON:0000970;5.92e-12;20!UBERON:0002104;2.03e-11;21!UBERON:0000020;1.75e-10;23!UBERON:0001032;4.48e-10;24!UBERON:0004456;4.48e-10;24!UBERON:0001896;1.67e-09;3!UBERON:0005290;1.67e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,6.61e-50,2;UBERON:0002757,6.61e-50,2;UBERON:0010134,6.61e-50,2;UBERON:0005408,6.61e-50,2;UBERON:0001899,6.61e-50,2;UBERON:0003296,1.43e-25,4;UBERON:0010133,1.43e-25,4;UBERON:0002784,1.43e-25,4;UBERON:0000966,1.03e-17,6;UBERON:0005388,1.03e-17,6;UBERON:0001802,1.03e-17,6;UBERON:0001894,4.37e-15,7;UBERON:0006222,4.37e-15,7;UBERON:0000970,2.03e-11,21;UBERON:0002104,2.03e-11,21;UBERON:0000020,4.48e-10,24;UBERON:0001032,4.48e-10,24;UBERON:0004456,4.48e-10,24;UBERON:0001016,8.97e-10,89;UBERON:0001896,1.67e-09,3;UBERON:0005290,1.67e-09,3;UBERON:0010096,1.67e-09,3;UBERON:0000955,4.45e-09,68;UBERON:0006238,4.45e-09,68;UBERON:0003075,1.04e-07,82;UBERON:0007284,1.04e-07,82;UBERON:0001017,1.11e-07,81;UBERON:0002346,2.32e-07,86;UBERON:0004121,5.88e-07,171;UBERON:0000924,5.88e-07,171;UBERON:0006601,5.88e-07,171;UBERON:0003056,7.64e-07,61 | |||
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|short_description=p@chr12:120801369..120801380,- | |||
}} | }} |
Latest revision as of 05:45, 24 July 2015
Short description: | p@chr12:120801369..120801380, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:120801369..120801380, - |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 8.11e-07 | 15 |
glial cell | 8.11e-07 | 15 |
glioblast | 8.11e-07 | 15 |
glioblast (sensu Vertebrata) | 8.11e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
pineal body | 6.61e-50 | 2 |
regional part of epithalamus | 6.61e-50 | 2 |
secretory circumventricular organ | 6.61e-50 | 2 |
circumventricular organ | 6.61e-50 | 2 |
epithalamus | 6.61e-50 | 2 |
gland of diencephalon | 1.43e-25 | 4 |
neuroendocrine gland | 1.43e-25 | 4 |
regional part of diencephalon | 1.43e-25 | 4 |
retina | 1.03e-17 | 6 |
photoreceptor array | 1.03e-17 | 6 |
posterior segment of eyeball | 1.03e-17 | 6 |
diencephalon | 4.37e-15 | 7 |
future diencephalon | 4.37e-15 | 7 |
eye | 2.03e-11 | 21 |
visual system | 2.03e-11 | 21 |
sense organ | 4.48e-10 | 24 |
sensory system | 4.48e-10 | 24 |
entire sense organ system | 4.48e-10 | 24 |
nervous system | 8.97e-10 | 89 |
medulla oblongata | 1.67e-09 | 3 |
myelencephalon | 1.67e-09 | 3 |
future myelencephalon | 1.67e-09 | 3 |
brain | 4.45e-09 | 68 |
future brain | 4.45e-09 | 68 |
neural plate | 1.04e-07 | 82 |
presumptive neural plate | 1.04e-07 | 82 |
central nervous system | 1.11e-07 | 81 |
neurectoderm | 2.32e-07 | 86 |
ectoderm-derived structure | 5.88e-07 | 171 |
ectoderm | 5.88e-07 | 171 |
presumptive ectoderm | 5.88e-07 | 171 |
pre-chordal neural plate | 7.64e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 2.77e-09 | 11 |