FFCP PHASE1:Hg19::chr12:120801369..120801380,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:120801369..120801380,- | |||
|coexpression_cluster_id=C40 | |coexpression_cluster_id=C40 | ||
|description=CAGE_peak_at_chr12:120801369..120801380,- | |description=CAGE_peak_at_chr12:120801369..120801380,- | ||
|id=chr12:120801369..120801380,- | |id=chr12:120801369..120801380,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000243;7.76e-07;15!CL:0000125;7.76e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,8.11e-07,15;CL:0000125,8.11e-07,15;CL:0000030,8.11e-07,15;CL:0000339,8.11e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.81e-34;3!UBERON:0006238;4.52e-10;10!UBERON:0006601;2.40e-07;82!CL:0000339;7.76e-07;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;2.60e-09;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,2.77e-09,11 | |||
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|short_description=p@chr12:120801369..120801380,- | |short_description=p@chr12:120801369..120801380,- | ||
}} | }} |
Latest revision as of 05:45, 24 July 2015
Short description: | p@chr12:120801369..120801380, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:120801369..120801380, - |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 8.11e-07 | 15 |
glial cell | 8.11e-07 | 15 |
glioblast | 8.11e-07 | 15 |
glioblast (sensu Vertebrata) | 8.11e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
pineal body | 6.61e-50 | 2 |
regional part of epithalamus | 6.61e-50 | 2 |
secretory circumventricular organ | 6.61e-50 | 2 |
circumventricular organ | 6.61e-50 | 2 |
epithalamus | 6.61e-50 | 2 |
gland of diencephalon | 1.43e-25 | 4 |
neuroendocrine gland | 1.43e-25 | 4 |
regional part of diencephalon | 1.43e-25 | 4 |
retina | 1.03e-17 | 6 |
photoreceptor array | 1.03e-17 | 6 |
posterior segment of eyeball | 1.03e-17 | 6 |
diencephalon | 4.37e-15 | 7 |
future diencephalon | 4.37e-15 | 7 |
eye | 2.03e-11 | 21 |
visual system | 2.03e-11 | 21 |
sense organ | 4.48e-10 | 24 |
sensory system | 4.48e-10 | 24 |
entire sense organ system | 4.48e-10 | 24 |
nervous system | 8.97e-10 | 89 |
medulla oblongata | 1.67e-09 | 3 |
myelencephalon | 1.67e-09 | 3 |
future myelencephalon | 1.67e-09 | 3 |
brain | 4.45e-09 | 68 |
future brain | 4.45e-09 | 68 |
neural plate | 1.04e-07 | 82 |
presumptive neural plate | 1.04e-07 | 82 |
central nervous system | 1.11e-07 | 81 |
neurectoderm | 2.32e-07 | 86 |
ectoderm-derived structure | 5.88e-07 | 171 |
ectoderm | 5.88e-07 | 171 |
presumptive ectoderm | 5.88e-07 | 171 |
pre-chordal neural plate | 7.64e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 2.77e-09 | 11 |