FFCP PHASE1:Hg19::chr12:120125119..120125130,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:120125119..120125130,- | |||
|description=CAGE_peak_at_chr12:120125119..120125130,- | |description=CAGE_peak_at_chr12:120125119..120125130,- | ||
|id=chr12:120125119..120125130,- | |id=chr12:120125119..120125130,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002567;2.59e-12;3!CL:1000449;8.46e-10;15!CL:1000497;9.25e-09;17!CL:0002518;9.25e-09;17!CL:0002188;6.55e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,2.59e-12,3;CL:1000449,8.46e-10,15;CL:1000497,9.25e-09,17;CL:0002518,9.25e-09,17;CL:0002188,7.01e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.30e-08!239;DOID:162!3.13e-08!235;DOID:0050687!4.35e-07!143 | |ontology_enrichment_disease=DOID:14566!1.30e-08!239;DOID:162!3.13e-08!235;DOID:0050687!4.35e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:3307;9.07e-18;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,6.48e-18,2 | |||
|ontology_enrichment_uberon=UBERON:0002780!2.20e-10!41;UBERON:0001890!2.20e-10!41;UBERON:0006240!2.20e-10!41;UBERON:0002791!2.47e-10!33;UBERON:0002020!5.72e-10!34;UBERON:0003528!5.72e-10!34;UBERON:0003080!5.79e-10!42;UBERON:0001893!7.60e-10!34;UBERON:0001049!1.16e-09!57;UBERON:0005068!1.16e-09!57;UBERON:0006241!1.16e-09!57;UBERON:0007135!1.16e-09!57;UBERON:0002619!1.35e-09!22;UBERON:0001017!1.52e-09!82;UBERON:0001950!2.20e-09!20;UBERON:0000955!5.94e-09!69;UBERON:0006238!5.94e-09!69;UBERON:0001869!6.21e-09!32;UBERON:0000073!1.10e-08!94;UBERON:0001016!1.10e-08!94;UBERON:0005743!1.30e-08!86;UBERON:0000956!6.32e-08!25;UBERON:0000203!6.32e-08!25;UBERON:0002616!2.28e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;5.48e-18;2!UBERON:0006555;8.46e-10;15!UBERON:0004819;8.46e-10;15!UBERON:0001285;8.46e-10;15!UBERON:0007684;8.46e-10;15!UBERON:0001872;6.55e-08;5!UBERON:0001950;2.60e-07;20!UBERON:0000200;7.17e-07;6!UBERON:0002619;9.39e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,5.48e-18,2;UBERON:0004211,8.46e-10,15;UBERON:0009773,8.46e-10,15;UBERON:0001231,8.46e-10,15;UBERON:0001285,8.46e-10,15;UBERON:0007684,8.46e-10,15;UBERON:0004208,8.46e-10,15;UBERON:0006555,3.01e-09,16;UBERON:0004819,3.01e-09,16;UBERON:0001872,7.49e-08,5;UBERON:0001950,2.77e-07,20;UBERON:0000200,7.17e-07,6;UBERON:0002619,9.95e-07,22 | |||
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| ||
|short_description=p@chr12:120125119..120125130,- | |short_description=p@chr12:120125119..120125130,- | ||
}} | }} |
Latest revision as of 05:39, 24 July 2015
Short description: | p@chr12:120125119..120125130, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:120125119..120125130, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 2.59e-12 | 3 |
epithelial cell of nephron | 8.46e-10 | 15 |
kidney cell | 9.25e-09 | 17 |
kidney epithelial cell | 9.25e-09 | 17 |
glomerular endothelial cell | 7.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 5.48e-18 | 2 |
nephron epithelium | 8.46e-10 | 15 |
renal tubule | 8.46e-10 | 15 |
nephron tubule | 8.46e-10 | 15 |
nephron | 8.46e-10 | 15 |
uriniferous tubule | 8.46e-10 | 15 |
nephrogenic mesenchyme | 8.46e-10 | 15 |
excretory tube | 3.01e-09 | 16 |
kidney epithelium | 3.01e-09 | 16 |
parietal lobe | 7.49e-08 | 5 |
neocortex | 2.77e-07 | 20 |
gyrus | 7.17e-07 | 6 |
regional part of cerebral cortex | 9.95e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
teratoma | 6.48e-18 | 2 |