FFCP PHASE1:Hg19::chr12:115890146..115890147,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:115890146..115890147,+ | |||
|description=CAGE_peak_at_chr12:115890146..115890147,+ | |description=CAGE_peak_at_chr12:115890146..115890147,+ | ||
|id=chr12:115890146..115890147,+ | |id=chr12:115890146..115890147,+ | ||
|ontology_enrichment_celltype=CL:0000197!1.38e-13!6;CL:0000098!1.38e-13!6;CL:0002167!1.38e-13!6;CL:0000839!3.54e-11!70;CL:0002274!3.73e-11!5;CL:0000457!3.73e-11!5;CL:0002191!3.73e-11!5;CL:0000097!3.73e-11!5;CL:0000831!3.73e-11!5;CL:0002028!3.73e-11!5;CL:0000766!5.01e-10!76;CL:0000557!1.10e-09!71;CL:0002057!1.96e-09!42;CL:0000860!1.29e-08!45;CL:0000763!5.34e-08!112;CL:0000049!5.34e-08!112;CL:0000075!1.08e-07!27;CL:0002588!2.29e-07!2;CL:0000710!7.97e-07!20 | |ontology_enrichment_celltype=CL:0000197!1.38e-13!6;CL:0000098!1.38e-13!6;CL:0002167!1.38e-13!6;CL:0000839!3.54e-11!70;CL:0002274!3.73e-11!5;CL:0000457!3.73e-11!5;CL:0002191!3.73e-11!5;CL:0000097!3.73e-11!5;CL:0000831!3.73e-11!5;CL:0002028!3.73e-11!5;CL:0000766!5.01e-10!76;CL:0000557!1.10e-09!71;CL:0002057!1.96e-09!42;CL:0000860!1.29e-08!45;CL:0000763!5.34e-08!112;CL:0000049!5.34e-08!112;CL:0000075!1.08e-07!27;CL:0002588!2.29e-07!2;CL:0000710!7.97e-07!20 | ||
|ontology_enrichment_celltype_v019=CL:0000097;4.24e-16;5!CL:0000197;5.99e-13;6!CL:0000098;5.99e-13;6!CL:0002167;5.99e-13;6!CL:0000163;3.55e-09;9!CL:0000453;1.48e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.04e-16,5;CL:0002028,4.04e-16,5;CL:0000197,6.78e-13,6;CL:0000098,6.78e-13,6;CL:0002167,6.78e-13,6;CL:0000163,3.46e-09,9;CL:0000453,1.23e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.83e-08!80;UBERON:0001474!2.66e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;2.17e-09;4!UBERON:0010133;2.17e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.00e-10,56;UBERON:0005068,1.00e-10,56;UBERON:0006241,1.00e-10,56;UBERON:0007135,1.00e-10,56;UBERON:0003296,2.17e-09,4;UBERON:0010133,2.17e-09,4;UBERON:0000073,5.16e-09,53;UBERON:0002616,5.16e-09,53;UBERON:0001017,5.96e-07,81;UBERON:0003075,5.96e-07,82;UBERON:0007284,5.96e-07,82;UBERON:0002780,8.51e-07,41;UBERON:0001890,8.51e-07,41;UBERON:0003080,8.51e-07,41;UBERON:0006240,8.51e-07,41 | |||
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| ||
|short_description=p@chr12:115890146..115890147,+ | |short_description=p@chr12:115890146..115890147,+ | ||
}} | }} |
Latest revision as of 05:21, 24 July 2015
Short description: | p@chr12:115890146..115890147, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:115890146..115890147, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.04e-16 | 5 |
basophil mast progenitor cell | 4.04e-16 | 5 |
receptor cell | 6.78e-13 | 6 |
sensory epithelial cell | 6.78e-13 | 6 |
olfactory epithelial cell | 6.78e-13 | 6 |
endocrine cell | 3.46e-09 | 9 |
Langerhans cell | 1.23e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.00e-10 | 56 |
neural rod | 1.00e-10 | 56 |
future spinal cord | 1.00e-10 | 56 |
neural keel | 1.00e-10 | 56 |
gland of diencephalon | 2.17e-09 | 4 |
neuroendocrine gland | 2.17e-09 | 4 |
regional part of nervous system | 5.16e-09 | 53 |
regional part of brain | 5.16e-09 | 53 |
central nervous system | 5.96e-07 | 81 |
neural plate | 5.96e-07 | 82 |
presumptive neural plate | 5.96e-07 | 82 |
regional part of forebrain | 8.51e-07 | 41 |
forebrain | 8.51e-07 | 41 |
anterior neural tube | 8.51e-07 | 41 |
future forebrain | 8.51e-07 | 41 |