FFCP PHASE1:Hg19::chr12:113828144..113828149,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:113828144..113828149,+ | |||
|description=CAGE_peak_at_chr12:113828144..113828149,+ | |description=CAGE_peak_at_chr12:113828144..113828149,+ | ||
|id=chr12:113828144..113828149,+ | |id=chr12:113828144..113828149,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000153;1.92e-09;9!CL:0000447;1.92e-09;9!CL:0000327;3.49e-09;15!CL:0002579;1.65e-08;3!CL:0000499;2.79e-08;28!CL:0002334;7.64e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.57e-09,9;CL:0000447,2.57e-09,9;CL:0000327,3.81e-09,15;CL:0000499,2.65e-08,28;CL:0002579,4.17e-08,3;CL:0002334,7.14e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;6.18e-13;9!UBERON:0000042;6.18e-13;9!UBERON:0003296;1.67e-10;4!UBERON:0010133;1.67e-10;4!UBERON:0003688;2.44e-10;6!UBERON:0002358;2.44e-10;6!UBERON:0003684;2.44e-10;6!UBERON:0001178;2.44e-10;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,5.13e-11,4;UBERON:0010133,5.13e-11,4;UBERON:0003688,2.50e-10,6;UBERON:0002358,2.50e-10,6;UBERON:0003684,2.50e-10,6;UBERON:0001178,2.50e-10,6;UBERON:0004457,1.81e-09,12;UBERON:0000042,1.81e-09,12 | |||
|phase1_expression=0.363356758541113,0.642301571672949,1.9733616573436,0,1.34088328328186,0,0,0,0,0.245733936501509,0,0.655324116390517,0.263766978228454,0,0,0,0.602694528023977,0,0.975865597581014,0,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0,0.57470412614962,0.0787107813136792,0,0,0.154816123316076,0,0,0.369754010166788,0,0.142169232487422,0,0,0.401088894940283,0,0.447830948479849,0.32389366601898,0.257575567634187,0.145398238779565,0.755751887377619,0.485168122375632,0.929716147622738,0.822335776043652,0.309706370895104,0.28769239232215,0.256160706529101,0,0.344745680736619,0,0,1.31769637679823,0.818718450173537,0.224723484445085,1.53041946185451,0.320929027076094,0.639337125799041,0,1.39624560335142,0.426224750532694,0.870627715885752,0.56738522469114,0,1.25624332628372,2.08593167368081,0,0,0,0,0.211255286311942,0.212604299965044,0,0,0,0.64290234678832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0.493313713811028,0.552700035571697,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0.12786256184353,2.1686349143074,1.00267582127178,1.15877215168659,0,1.45990461090791,0.189069634328136,0.221729397462564,0.351339142772504,0.0654895377488563,0.364295288292542,0,0.97364218096405,0.870648686496336,1.06366368415092,0,0,0,0,0,0,0,0,1.10047216776027,0,0,1.06729878806013,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0.81014194788176,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0.872188104285069,0.993943903390637,0.633152558322899,0.397227542439656,0.286836620748814,1.06400514659507,0,0,0,0.311211035399766,0.269421344139376,0,0.151357427644931,0,0.234321431833797,0.936480230490962,0,0.448346041655403,0.469737994575059,0,0,0.204154171254893,0.368502951935304,0.413303124703062,0,0.494533858557114,0,0,0.168336113954066,0.375355559615893,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0.89694817844431,0.427114777637135,0.423863802319124,1.50045548042201,0.721367704669072,0.772921620136887,0.930584281657949,1.85653965465393,0.0974370051611986,0.757301322732344,0.828449087780694,0.323292113637624,0.355009592516614,0.403008392910561,0,0.386521706326594,0.272746120590835,0.286804595389004,0.243947412259191,0,0.580969714347592,0.207322110030741,0.756962552626885,0.36497735907583,0,2.57296375277154,0,1.39310378409594,0.721879481669586,0,0.337169380156203,0.241011029883482,0.661763836394364,0.217879444092406,0.474541238222193,0.539325232640658,0.196221465125346,0.38474715694639,0,0,1.2347220339942,1.47008711385542,1.26755034821831,0,0,0,0.368965315629341,0.857839051492628,0.329250856225877,0,0.502644862058154,0.370353780634118,0.325808305310325,0,0,1.04337364477569,0,0,0.925971025153221,0.951270761172991,0,0,0.492434012174795,0.468008530278475,0.594524649154913,0,0.671928512795438,0.141775097242386,0.447792613514241,0.581267877027924,0,0,0.704387472105808,0.207328115540772,0,0,0.190493682876507,1.52795370223311,0,0,0.822619941626588,0,0.571652865261156,0.224262168690721,0.43596006883328,0.2933531432838,0.775630294546667,3.57656445851882,0,0.26593811658487,2.08014873822732,0,0,0.266422179016099,1.42977993658148,0,0,0.65147236858747,0.355391948742546,0,0.904318131178758,0,1.29964888536674,3.64871341923571,2.51128545716063,6.32501818449095,0.718874566474748,1.14861935834114,1.42636905040718,0.144781306667579,0.205476322550383,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,1.91381625495949,0,0,0,1.10422342547226,1.00034104211935,0.271265023699736,1.87173775377726,1.42743191037729,0.630809660135739,0.468565659970853,0.300946099727719,0,0,0.664225598535437,0.184369168541703,1.21637060255316,0.195801157462741,0.343143423810856,0,0.431428401637234,0,0,0,0,0.496215615637554,1.2276957863045,1.96462066103151,2.05022638809122,1.02341449813341,2.0911009748669,1.48418066444991,0.616838775210622,0.532685175939381,0.328508624055237,0,0.116210378459959,0.241718899183244,0.802025881213139,0.0920809889358963,0.114814448164607,0.182091168006717,0.524497659837696,0.451199612907412,0.462092022626489,0,0,0.844413031143006,0,0.170093705276516,0.215915916102139,0,0.270946437543853,1.00337954770971,0.254876273045038,0,0,0.219259876645935,0,0,0.656029291399411,0.650756789328606,0.103041011647722,0.183138929636687,0.577566499444116,0.574265537996172,0.650060246036521,0,0.193341436584244,0.154048617114644,0.460511024178389,0.137836572484531,0.214840489736547,0.290033387828457,0.340906509664404,0.445160178233687,0.330569830721956,0.384380134730212,0.255225424989168,0.30347334256665,0,1.88887408098384,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0.38126038784765,0.255897791311334,0.855877976067841,0.318203247925937,0,0,0.274537029736055,0.235624804691373,0,0,0,0.975267478179181,0.974853958525138,1.05650146756755,0,0.141405431953713,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0.143411352204052,0.196498082026242,0,0,1.47775344708365,3.29294892959902,0,0,0.192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|phase1_expression=0.363356758541113,0.642301571672949,1.9733616573436,0,1.34088328328186,0,0,0,0,0.245733936501509,0,0.655324116390517,0.263766978228454,0,0,0,0.602694528023977,0,0.975865597581014,0,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0,0.57470412614962,0.0787107813136792,0,0,0.154816123316076,0,0,0.369754010166788,0,0.142169232487422,0,0,0.401088894940283,0,0.447830948479849,0.32389366601898,0.257575567634187,0.145398238779565,0.755751887377619,0.485168122375632,0.929716147622738,0.822335776043652,0.309706370895104,0.28769239232215,0.256160706529101,0,0.344745680736619,0,0,1.31769637679823,0.818718450173537,0.224723484445085,1.53041946185451,0.320929027076094,0.639337125799041,0,1.39624560335142,0.426224750532694,0.870627715885752,0.56738522469114,0,1.25624332628372,2.08593167368081,0,0,0,0,0.211255286311942,0.212604299965044,0,0,0,0.64290234678832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0.493313713811028,0.552700035571697,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0.12786256184353,2.1686349143074,1.00267582127178,1.15877215168659,0,1.45990461090791,0.189069634328136,0.221729397462564,0.351339142772504,0.0654895377488563,0.364295288292542,0,0.97364218096405,0.870648686496336,1.06366368415092,0,0,0,0,0,0,0,0,1.10047216776027,0,0,1.06729878806013,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0.81014194788176,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0.872188104285069,0.993943903390637,0.633152558322899,0.397227542439656,0.286836620748814,1.06400514659507,0,0,0,0.311211035399766,0.269421344139376,0,0.151357427644931,0,0.234321431833797,0.936480230490962,0,0.448346041655403,0.469737994575059,0,0,0.204154171254893,0.368502951935304,0.413303124703062,0,0.494533858557114,0,0,0.168336113954066,0.375355559615893,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0.89694817844431,0.427114777637135,0.423863802319124,1.50045548042201,0.721367704669072,0.772921620136887,0.930584281657949,1.85653965465393,0.0974370051611986,0.757301322732344,0.828449087780694,0.323292113637624,0.355009592516614,0.403008392910561,0,0.386521706326594,0.272746120590835,0.286804595389004,0.243947412259191,0,0.580969714347592,0.207322110030741,0.756962552626885,0.36497735907583,0,2.57296375277154,0,1.39310378409594,0.721879481669586,0,0.337169380156203,0.241011029883482,0.661763836394364,0.217879444092406,0.474541238222193,0.539325232640658,0.196221465125346,0.38474715694639,0,0,1.2347220339942,1.47008711385542,1.26755034821831,0,0,0,0.368965315629341,0.857839051492628,0.329250856225877,0,0.502644862058154,0.370353780634118,0.325808305310325,0,0,1.04337364477569,0,0,0.925971025153221,0.951270761172991,0,0,0.492434012174795,0.468008530278475,0.594524649154913,0,0.671928512795438,0.141775097242386,0.447792613514241,0.581267877027924,0,0,0.704387472105808,0.207328115540772,0,0,0.190493682876507,1.52795370223311,0,0,0.822619941626588,0,0.571652865261156,0.224262168690721,0.43596006883328,0.2933531432838,0.775630294546667,3.57656445851882,0,0.26593811658487,2.08014873822732,0,0,0.266422179016099,1.42977993658148,0,0,0.65147236858747,0.355391948742546,0,0.904318131178758,0,1.29964888536674,3.64871341923571,2.51128545716063,6.32501818449095,0.718874566474748,1.14861935834114,1.42636905040718,0.144781306667579,0.205476322550383,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,1.91381625495949,0,0,0,1.10422342547226,1.00034104211935,0.271265023699736,1.87173775377726,1.42743191037729,0.630809660135739,0.468565659970853,0.300946099727719,0,0,0.664225598535437,0.184369168541703,1.21637060255316,0.195801157462741,0.343143423810856,0,0.431428401637234,0,0,0,0,0.496215615637554,1.2276957863045,1.96462066103151,2.05022638809122,1.02341449813341,2.0911009748669,1.48418066444991,0.616838775210622,0.532685175939381,0.328508624055237,0,0.116210378459959,0.241718899183244,0.802025881213139,0.0920809889358963,0.114814448164607,0.182091168006717,0.524497659837696,0.451199612907412,0.462092022626489,0,0,0.844413031143006,0,0.170093705276516,0.215915916102139,0,0.270946437543853,1.00337954770971,0.254876273045038,0,0,0.219259876645935,0,0,0.656029291399411,0.650756789328606,0.103041011647722,0.183138929636687,0.577566499444116,0.574265537996172,0.650060246036521,0,0.193341436584244,0.154048617114644,0.460511024178389,0.137836572484531,0.214840489736547,0.290033387828457,0.340906509664404,0.445160178233687,0.330569830721956,0.384380134730212,0.255225424989168,0.30347334256665,0,1.88887408098384,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0.38126038784765,0.255897791311334,0.855877976067841,0.318203247925937,0,0,0.274537029736055,0.235624804691373,0,0,0,0.975267478179181,0.974853958525138,1.05650146756755,0,0.141405431953713,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0.143411352204052,0.196498082026242,0,0,1.47775344708365,3.29294892959902,0,0,0.192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| ||
|short_description=p@chr12:113828144..113828149,+ | |short_description=p@chr12:113828144..113828149,+ | ||
}} | }} |
Latest revision as of 05:13, 24 July 2015
Short description: | p@chr12:113828144..113828149, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:113828144..113828149, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.57e-09 | 9 |
carbohydrate secreting cell | 2.57e-09 | 9 |
extracellular matrix secreting cell | 3.81e-09 | 15 |
stromal cell | 2.65e-08 | 28 |
omentum preadipocyte | 4.17e-08 | 3 |
preadipocyte | 7.14e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 5.13e-11 | 4 |
neuroendocrine gland | 5.13e-11 | 4 |
omentum | 2.50e-10 | 6 |
peritoneum | 2.50e-10 | 6 |
abdominal cavity | 2.50e-10 | 6 |
visceral peritoneum | 2.50e-10 | 6 |
cavity lining | 1.81e-09 | 12 |
serous membrane | 1.81e-09 | 12 |