FFCP PHASE1:Hg19::chr12:10854395..10854428,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:10854395..10854428,- | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_at_chr12:10854395..10854428,- | |description=CAGE_peak_at_chr12:10854395..10854428,- | ||
|id=chr12:10854395..10854428,- | |id=chr12:10854395..10854428,- | ||
|ontology_enrichment_celltype=CL:0000764!1.38e-13!2;CL:0000765!1.38e-13!2;CL:0000050!1.38e-13!2;CL:0000038!1.38e-13!2;CL:0000558!1.38e-13!2;CL:0000547!1.38e-13!2;CL:0000549!1.38e-13!2;CL:0000550!1.38e-13!2;CL:0000552!1.38e-13!2;CL:0002174!2.37e-07!1;CL:0000501!2.37e-07!1 | |ontology_enrichment_celltype=CL:0000764!1.38e-13!2;CL:0000765!1.38e-13!2;CL:0000050!1.38e-13!2;CL:0000038!1.38e-13!2;CL:0000558!1.38e-13!2;CL:0000547!1.38e-13!2;CL:0000549!1.38e-13!2;CL:0000550!1.38e-13!2;CL:0000552!1.38e-13!2;CL:0002174!2.37e-07!1;CL:0000501!2.37e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000764;8.57e-32;2!CL:0000558;8.57e-32;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,8.57e-32,2;CL:0000765,8.57e-32,2;CL:0000050,8.57e-32,2;CL:0000038,8.57e-32,2;CL:0000558,8.57e-32,2;CL:0000547,8.57e-32,2;CL:0000549,8.57e-32,2;CL:0000550,8.57e-32,2;CL:0000552,8.57e-32,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060085!3.41e-07!1;DOID:3165!3.41e-07!1;DOID:0060121!3.41e-07!1;DOID:2438!3.41e-07!1;DOID:4418!3.41e-07!1 | |ontology_enrichment_disease=DOID:0060085!3.41e-07!1;DOID:3165!3.41e-07!1;DOID:0060121!3.41e-07!1;DOID:2438!3.41e-07!1;DOID:4418!3.41e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.12e-32!15;UBERON:0000179!4.12e-32!15;UBERON:0000463!4.12e-32!15;UBERON:0007023!4.32e-10!115 | |ontology_enrichment_uberon=UBERON:0000178!4.12e-32!15;UBERON:0000179!4.12e-32!15;UBERON:0000463!4.12e-32!15;UBERON:0007023!4.32e-10!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.53e-81;15!UBERON:0000179;2.53e-81;15!UBERON:0000463;2.53e-81;15!UBERON:0002390;1.27e-34;32!UBERON:0002193;2.87e-19;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.53e-81,15;UBERON:0000179,2.53e-81,15;UBERON:0000463,2.53e-81,15;UBERON:0007023,2.77e-15,114;UBERON:0002390,9.42e-12,98;UBERON:0003061,9.42e-12,98;UBERON:0004535,1.34e-10,109;UBERON:0002193,1.34e-10,108;UBERON:0001009,2.72e-10,112 | |||
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|short_description=p@chr12:10854395..10854428,- | |short_description=p@chr12:10854395..10854428,- | ||
}} | }} |
Latest revision as of 04:34, 24 July 2015
Short description: | p@chr12:10854395..10854428, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:10854395..10854428, - |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 8.57e-32 | 2 |
erythroblast | 8.57e-32 | 2 |
megakaryocyte-erythroid progenitor cell | 8.57e-32 | 2 |
erythroid progenitor cell | 8.57e-32 | 2 |
reticulocyte | 8.57e-32 | 2 |
proerythroblast | 8.57e-32 | 2 |
basophilic erythroblast | 8.57e-32 | 2 |
polychromatophilic erythroblast | 8.57e-32 | 2 |
orthochromatic erythroblast | 8.57e-32 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.53e-81 | 15 |
haemolymphatic fluid | 2.53e-81 | 15 |
organism substance | 2.53e-81 | 15 |
adult organism | 2.77e-15 | 114 |
hematopoietic system | 9.42e-12 | 98 |
blood island | 9.42e-12 | 98 |
cardiovascular system | 1.34e-10 | 109 |
hemolymphoid system | 1.34e-10 | 108 |
circulatory system | 2.72e-10 | 112 |