FFCP PHASE1:Hg19::chr11:92613813..92613863,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:92613813..92613863,+ | |||
|coexpression_cluster_id=C77 | |||
|description=CAGE_peak_at_chr11:92613813..92613863,+ | |description=CAGE_peak_at_chr11:92613813..92613863,+ | ||
|id=chr11:92613813..92613863,+ | |id=chr11:92613813..92613863,+ | ||
|ontology_enrichment_celltype=CL:0002166!6.62e-11!3;CL:0000064!1.77e-10!3;CL:0005012!1.77e-10!3;CL:0000067!1.77e-10!3;CL:0002304!1.77e-10!3;CL:0002605!2.92e-10!3;CL:0002586!5.92e-10!3;CL:0002621!8.27e-10!3;CL:0000066!9.40e-08!254;CL:0000149!1.48e-07!4 | |ontology_enrichment_celltype=CL:0002166!6.62e-11!3;CL:0000064!1.77e-10!3;CL:0005012!1.77e-10!3;CL:0000067!1.77e-10!3;CL:0002304!1.77e-10!3;CL:0002605!2.92e-10!3;CL:0002586!5.92e-10!3;CL:0002621!8.27e-10!3;CL:0000066!9.40e-08!254;CL:0000149!1.48e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002166;1.10e-29;3!CL:0000064;1.22e-28;3!CL:0000067;1.22e-28;3!CL:0005012;1.22e-28;3!CL:0002304;1.22e-28;3!CL:1001319;3.08e-11;1!CL:1000600;3.08e-11;1!CL:0000342;6.76e-11;1!CL:0002565;6.76e-11;1!CL:0000062;1.79e-10;9!CL:0000306;2.99e-10;4!CL:0002222;2.99e-10;4!CL:0002224;2.99e-10;4!CL:0002077;8.70e-09;34!CL:0000075;1.52e-08;27!CL:0002159;8.69e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.11e-29,3;CL:0000064,2.17e-28,3;CL:0000067,2.17e-28,3;CL:0005012,2.17e-28,3;CL:0002304,2.17e-28,3;CL:0000062,1.96e-14,11;CL:0000375,1.96e-14,11;CL:0000335,1.96e-14,11;CL:1001319,3.08e-11,1;CL:1000600,3.08e-11,1;CL:0000342,6.14e-11,1;CL:0002565,6.14e-11,1;CL:0000306,2.60e-10,4;CL:0002222,2.60e-10,4;CL:0002224,2.60e-10,4;CL:0002077,1.22e-09,34;CL:0000075,1.60e-08,27;CL:0000221,3.37e-07,72;CL:0002159,8.69e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000335;2.10e-14;11 | |||
|ontology_enrichment_disease=DOID:7!9.16e-07!39 | |ontology_enrichment_disease=DOID:7!9.16e-07!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!3.09e-22!11;UBERON:0000488!1.70e-13!4;UBERON:0000019!4.39e-12!19;UBERON:0000047!4.39e-12!19;UBERON:0004088!4.39e-12!19;UBERON:0003072!4.39e-12!19;UBERON:0003071!4.39e-12!19;UBERON:0004128!4.39e-12!19;UBERON:0000970!2.18e-11!20;UBERON:0005085!7.43e-11!29;UBERON:0002104!9.30e-11!21;UBERON:0001456!9.30e-11!21;UBERON:0001778!1.77e-10!3;UBERON:0001775!1.77e-10!3;UBERON:0001781!5.92e-10!3;UBERON:0001782!5.92e-10!3;UBERON:0005424!5.92e-10!3;UBERON:0001949!8.27e-10!3;UBERON:0000020!1.15e-09!23;UBERON:0001032!3.46e-09!24;UBERON:0004456!3.46e-09!24;UBERON:0002203!5.53e-09!6;UBERON:0001768!5.53e-09!6;UBERON:0001708!2.93e-08!4;UBERON:0001704!2.93e-08!4;UBERON:0001444!4.83e-08!48;UBERON:0001801!7.66e-08!14;UBERON:0000033!2.50e-07!123;UBERON:0002200!3.82e-07!11;UBERON:0006876!3.82e-07!11;UBERON:0000153!9.39e-07!129;UBERON:0007811!9.39e-07!129 | |ontology_enrichment_uberon=UBERON:0007625!3.09e-22!11;UBERON:0000488!1.70e-13!4;UBERON:0000019!4.39e-12!19;UBERON:0000047!4.39e-12!19;UBERON:0004088!4.39e-12!19;UBERON:0003072!4.39e-12!19;UBERON:0003071!4.39e-12!19;UBERON:0004128!4.39e-12!19;UBERON:0000970!2.18e-11!20;UBERON:0005085!7.43e-11!29;UBERON:0002104!9.30e-11!21;UBERON:0001456!9.30e-11!21;UBERON:0001778!1.77e-10!3;UBERON:0001775!1.77e-10!3;UBERON:0001781!5.92e-10!3;UBERON:0001782!5.92e-10!3;UBERON:0005424!5.92e-10!3;UBERON:0001949!8.27e-10!3;UBERON:0000020!1.15e-09!23;UBERON:0001032!3.46e-09!24;UBERON:0004456!3.46e-09!24;UBERON:0002203!5.53e-09!6;UBERON:0001768!5.53e-09!6;UBERON:0001708!2.93e-08!4;UBERON:0001704!2.93e-08!4;UBERON:0001444!4.83e-08!48;UBERON:0001801!7.66e-08!14;UBERON:0000033!2.50e-07!123;UBERON:0002200!3.82e-07!11;UBERON:0006876!3.82e-07!11;UBERON:0000153!9.39e-07!129;UBERON:0007811!9.39e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0000488;9.80e-38;4!UBERON:0007625;3.71e-30;11!UBERON:0001778;1.22e-28;3!UBERON:0001775;1.22e-28;3!UBERON:0002203;2.74e-25;6!UBERON:0001768;2.74e-25;6!UBERON:0002200;2.74e-25;6!UBERON:0001801;1.23e-23;14!UBERON:0001708;1.94e-22;4!UBERON:0008895;1.94e-22;4!UBERON:0011159;4.43e-18;5!UBERON:0004765;1.34e-17;26!UBERON:0000019;2.49e-17;19!UBERON:0000047;2.49e-17;19!UBERON:0004088;2.49e-17;19!UBERON:0010230;2.49e-17;19!UBERON:0000970;1.91e-16;20!UBERON:0002104;1.20e-15;21!UBERON:0001456;1.20e-15;21!UBERON:0000020;2.97e-14;23!UBERON:0006876;6.27e-14;11!UBERON:0010371;6.73e-14;31!UBERON:0001032;1.21e-13;24!UBERON:0004456;1.21e-13;24!UBERON:0001434;8.30e-13;36!UBERON:0004645;3.08e-11;1!UBERON:0001256;3.08e-11;1!UBERON:0001259;3.08e-11;1!UBERON:0002506;6.76e-11;1!UBERON:0001769;6.76e-11;1!UBERON:0010077;2.99e-10;4!UBERON:0005389;2.99e-10;4!UBERON:0000484;2.99e-10;4!UBERON:0000965;2.99e-10;4!UBERON:0001803;2.99e-10;4!UBERON:0001474;7.13e-09;18!UBERON:0011137;1.63e-08;11!UBERON:0010323;1.63e-08;11!UBERON:0001444;9.11e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,1.58e-37,4;UBERON:0007625,4.12e-30,11;UBERON:0001778,2.17e-28,3;UBERON:0001775,2.17e-28,3;UBERON:0002203,3.75e-25,6;UBERON:0001768,3.75e-25,6;UBERON:0002200,3.75e-25,6;UBERON:0001801,1.34e-23,14;UBERON:0001708,1.95e-22,4;UBERON:0008895,1.95e-22,4;UBERON:0011159,4.43e-18,5;UBERON:0000019,2.02e-16,20;UBERON:0000047,2.02e-16,20;UBERON:0010312,2.02e-16,20;UBERON:0004088,2.02e-16,20;UBERON:0010230,2.02e-16,20;UBERON:0003072,2.02e-16,20;UBERON:0004128,2.02e-16,20;UBERON:0003071,2.02e-16,20;UBERON:0000970,1.27e-15,21;UBERON:0002104,1.27e-15,21;UBERON:0000033,1.94e-15,56;UBERON:0010188,3.62e-15,6;UBERON:0002539,3.62e-15,6;UBERON:0008816,3.62e-15,6;UBERON:0001456,6.76e-15,22;UBERON:0005085,4.88e-14,31;UBERON:0006876,7.43e-14,11;UBERON:0000153,8.33e-14,62;UBERON:0007811,8.33e-14,62;UBERON:0000020,1.27e-13,24;UBERON:0001032,1.27e-13,24;UBERON:0004456,1.27e-13,24;UBERON:0004645,3.08e-11,1;UBERON:0001256,3.08e-11,1;UBERON:0001259,3.08e-11,1;UBERON:0000076,4.83e-11,8;UBERON:0002506,6.14e-11,1;UBERON:0001769,6.14e-11,1;UBERON:0010077,2.60e-10,4;UBERON:0005389,2.60e-10,4;UBERON:0000484,2.60e-10,4;UBERON:0002546,2.60e-10,4;UBERON:0000965,2.60e-10,4;UBERON:0001803,2.60e-10,4;UBERON:0003073,2.60e-10,4;UBERON:0005426,2.60e-10,4;UBERON:0008814,9.12e-09,18;UBERON:0001444,1.09e-08,49;UBERON:0010323,1.63e-08,11;UBERON:0010314,6.94e-07,132;UBERON:0011137,8.69e-07,14 | |||
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| ||
|short_description=p@chr11:92613813..92613863,+ | |short_description=p@chr11:92613813..92613863,+ | ||
}} | }} |
Latest revision as of 03:30, 24 July 2015
Short description: | p@chr11:92613813..92613863, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:92613813..92613863, + |
Coexpression cluster: | C77_Saos2_osteosarcoma_Neutrophils_Natural_Chondrocyte_Basophils_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.11e-29 | 3 |
ciliated cell | 2.17e-28 | 3 |
ciliated epithelial cell | 2.17e-28 | 3 |
multi-ciliated epithelial cell | 2.17e-28 | 3 |
non-pigmented ciliary epithelial cell | 2.17e-28 | 3 |
osteoblast | 1.96e-14 | 11 |
osteoprogenitor cell | 1.96e-14 | 11 |
mesenchyme condensation cell | 1.96e-14 | 11 |
bladder cell | 3.08e-11 | 1 |
lower urinary tract cell | 3.08e-11 | 1 |
pigment cell (sensu Vertebrata) | 6.14e-11 | 1 |
iris pigment epithelial cell | 6.14e-11 | 1 |
crystallin accumulating cell | 2.60e-10 | 4 |
vertebrate lens cell | 2.60e-10 | 4 |
lens epithelial cell | 2.60e-10 | 4 |
ecto-epithelial cell | 1.22e-09 | 34 |
columnar/cuboidal epithelial cell | 1.60e-08 | 27 |
ectodermal cell | 3.37e-07 | 72 |
general ecto-epithelial cell | 8.69e-07 | 14 |