FFCP PHASE1:Hg19::chr11:78138481..78138514,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:78138481..78138514,- to FFCP PHASE1:Hg19::chr11:78138481..78138514,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:78138481..78138514,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr11:78138481..78138514,- | |||
|id=chr11:78138481..78138514,- | |||
|ontology_enrichment_celltype=CL:0002057!2.22e-49!42;CL:0000860!9.80e-46!45;CL:0002009!9.95e-39!65;CL:0002194!8.26e-37!63;CL:0000576!8.26e-37!63;CL:0000040!8.26e-37!63;CL:0000559!8.26e-37!63;CL:0000766!2.35e-35!76;CL:0000557!5.24e-35!71;CL:0000839!1.29e-32!70;CL:0000738!8.29e-29!140;CL:0002087!3.25e-28!119;CL:0000080!2.26e-27!6;CL:0000988!2.35e-27!182;CL:0000763!3.44e-26!112;CL:0000049!3.44e-26!112;CL:0000037!8.48e-24!172;CL:0000566!8.48e-24!172;CL:0002031!5.97e-23!124;CL:0002032!3.51e-20!165;CL:0000837!3.51e-20!165;CL:0000842!7.57e-14!3;CL:0000224!1.63e-10!4;CL:0000134!2.33e-08!358;CL:0002320!4.67e-08!365;CL:0000219!1.14e-07!390;CL:0000775!3.13e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.47e-35;33!CL:0002057;2.47e-35;33!CL:0000473;1.23e-29;39!CL:0000234;1.23e-29;39!CL:0000766;9.74e-16;69!CL:0000576;3.41e-15;48!CL:0000763;2.35e-09;100!CL:0002087;3.47e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.29e-32,48;CL:0000234,3.29e-32,48;CL:0000860,1.32e-30,42;CL:0002057,1.32e-30,42;CL:0002194,1.52e-25,59;CL:0000576,1.52e-25,59;CL:0000040,1.52e-25,59;CL:0000559,1.52e-25,59;CL:0000766,8.30e-25,72;CL:0002009,1.10e-24,61;CL:0000839,9.34e-23,66;CL:0000557,2.10e-22,67;CL:0000763,3.51e-16,108;CL:0000049,3.51e-16,108;CL:0000988,3.07e-15,177;CL:0002087,1.27e-12,115;CL:0000738,1.37e-12,136;CL:0002031,4.76e-12,120;CL:0002032,2.00e-10,161;CL:0000837,2.00e-10,161;CL:0000037,6.22e-10,168 | |||
|ontology_enrichment_development_v019=CL:0002057;2.09e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.77e-39!102;UBERON:0003061!1.77e-39!102;UBERON:0002193!2.36e-35!112;UBERON:0002371!1.85e-30!80;UBERON:0001474!5.97e-28!86;UBERON:0004765!5.66e-23!101;UBERON:0001434!5.66e-23!101;UBERON:0002405!2.96e-21!115;UBERON:0003081!5.47e-15!216;UBERON:0002204!1.13e-11!167;UBERON:0000178!1.35e-10!15;UBERON:0000179!1.35e-10!15;UBERON:0000463!1.35e-10!15;UBERON:0002384!1.21e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.65e-12;10!UBERON:0000178;1.58e-08;15!UBERON:0000179;1.58e-08;15!UBERON:0000463;1.58e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.26e-25,98;UBERON:0003061,9.26e-25,98;UBERON:0002193,2.33e-22,108;UBERON:0002371,1.20e-19,76;UBERON:0001474,3.85e-18,82;UBERON:0004765,1.94e-16,90;UBERON:0002405,7.11e-16,93;UBERON:0001434,1.09e-14,100;UBERON:0002331,1.75e-12,10;UBERON:0000358,1.75e-12,10;UBERON:0000307,1.75e-12,10;UBERON:0000091,1.75e-12,10;UBERON:0000087,1.75e-12,10;UBERON:0007010,1.75e-12,10;UBERON:0007806,1.75e-12,10;UBERON:0008780,1.75e-12,10;UBERON:0005728,1.75e-12,10;UBERON:0003081,3.09e-11,203;UBERON:0000178,1.64e-08,15;UBERON:0000179,1.64e-08,15;UBERON:0000463,1.64e-08,15;UBERON:0002204,2.65e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0.697287110717054,0,0.309706370895104,0.575384784644301,0,0.709446689665756,1.37898272294647,1.29096936716765,0,0,0.272906150057846,0.224723484445085,7.95818120164347,2.88836124368484,0.639337125799041,0.329851300186716,0,0,16.2517173632007,3.97169657283798,4.35975574296902,0,0.521482918420201,0,12.7133895553007,6.2607198117886,6.64571013625857,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.615424027305347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.26173241548684,2.34771483998355,2.29728288912002,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0.697287110717054,0,0.309706370895104,0.575384784644301,0,0.709446689665756,1.37898272294647,1.29096936716765,0,0,0.272906150057846,0.224723484445085,7.95818120164347,2.88836124368484,0.639337125799041,0.329851300186716,0,0,16.2517173632007,3.97169657283798,4.35975574296902,0,0.521482918420201,0,12.7133895553007,6.2607198117886,6.64571013625857,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.615424027305347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.26173241548684,2.34771483998355,2.29728288912002,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:78138481..78138514,- | |||
}} | }} |
Latest revision as of 02:51, 24 July 2015
Short description: | p@chr11:78138481..78138514, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:78138481..78138514, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.29e-32 | 48 |
phagocyte | 3.29e-32 | 48 |
classical monocyte | 1.32e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.32e-30 | 42 |
monopoietic cell | 1.52e-25 | 59 |
monocyte | 1.52e-25 | 59 |
monoblast | 1.52e-25 | 59 |
promonocyte | 1.52e-25 | 59 |
myeloid leukocyte | 8.30e-25 | 72 |
macrophage dendritic cell progenitor | 1.10e-24 | 61 |
myeloid lineage restricted progenitor cell | 9.34e-23 | 66 |
granulocyte monocyte progenitor cell | 2.10e-22 | 67 |
myeloid cell | 3.51e-16 | 108 |
common myeloid progenitor | 3.51e-16 | 108 |
hematopoietic cell | 3.07e-15 | 177 |
nongranular leukocyte | 1.27e-12 | 115 |
leukocyte | 1.37e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 4.76e-12 | 120 |
hematopoietic oligopotent progenitor cell | 2.00e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.00e-10 | 161 |
hematopoietic stem cell | 6.22e-10 | 168 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.26e-25 | 98 |
blood island | 9.26e-25 | 98 |
hemolymphoid system | 2.33e-22 | 108 |
bone marrow | 1.20e-19 | 76 |
bone element | 3.85e-18 | 82 |
skeletal element | 1.94e-16 | 90 |
immune system | 7.11e-16 | 93 |
skeletal system | 1.09e-14 | 100 |
umbilical cord | 1.75e-12 | 10 |
blastocyst | 1.75e-12 | 10 |
blastula | 1.75e-12 | 10 |
bilaminar disc | 1.75e-12 | 10 |
inner cell mass | 1.75e-12 | 10 |
cleaving embryo | 1.75e-12 | 10 |
connecting stalk | 1.75e-12 | 10 |
inner cell mass derived epiblast | 1.75e-12 | 10 |
extraembryonic mesoderm | 1.75e-12 | 10 |
lateral plate mesoderm | 3.09e-11 | 203 |
blood | 1.64e-08 | 15 |
haemolymphatic fluid | 1.64e-08 | 15 |
organism substance | 1.64e-08 | 15 |
musculoskeletal system | 2.65e-08 | 167 |