FFCP PHASE1:Hg19::chr11:75939371..75939376,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:75939371..75939376,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_at_chr11:75939371..75939376,+ | |description=CAGE_peak_at_chr11:75939371..75939376,+ | ||
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|ontology_enrichment_celltype=CL:0000181!5.67e-17!12;CL:0000417!5.67e-17!12;CL:0000668!5.67e-17!12;CL:0000414!5.67e-17!12;CL:0000412!5.67e-17!12;CL:0000182!5.67e-17!12;CL:0000223!2.83e-07!59 | |ontology_enrichment_celltype=CL:0000181!5.67e-17!12;CL:0000417!5.67e-17!12;CL:0000668!5.67e-17!12;CL:0000414!5.67e-17!12;CL:0000412!5.67e-17!12;CL:0000182!5.67e-17!12;CL:0000223!2.83e-07!59 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.98e-23!19;UBERON:0006925!1.98e-23!19;UBERON:0008836!1.98e-23!19;UBERON:0008835!3.32e-20!22;UBERON:0003894!3.32e-20!22;UBERON:0009854!2.57e-19!23;UBERON:0007499!9.46e-18!25;UBERON:0009497!9.46e-18!25;UBERON:0000015!9.46e-18!25;UBERON:0002423!9.46e-18!25;UBERON:0006235!9.46e-18!25;UBERON:0004161!9.46e-18!25;UBERON:0005057!4.66e-17!26;UBERON:0009856!4.66e-17!26;UBERON:0000160!8.50e-16!27;UBERON:0004921!1.14e-14!129;UBERON:0004185!1.14e-14!129;UBERON:0002365!2.92e-14!31;UBERON:0002330!2.92e-14!31;UBERON:0003929!5.27e-14!54;UBERON:0002368!1.35e-12!35;UBERON:0005409!3.21e-12!35;UBERON:0001007!5.96e-12!155;UBERON:0001555!5.96e-12!155;UBERON:0007026!5.96e-12!155;UBERON:0004119!7.91e-11!169;UBERON:0000925!7.91e-11!169;UBERON:0006595!7.91e-11!169;UBERON:0005172!1.52e-10!55;UBERON:0005173!1.52e-10!55;UBERON:0002530!8.06e-10!59;UBERON:0000949!1.01e-09!45;UBERON:0002417!1.90e-09!61;UBERON:0000916!1.90e-09!61;UBERON:0005911!6.08e-09!82;UBERON:0002108!3.74e-08!14 | |ontology_enrichment_uberon=UBERON:0002107!1.98e-23!19;UBERON:0006925!1.98e-23!19;UBERON:0008836!1.98e-23!19;UBERON:0008835!3.32e-20!22;UBERON:0003894!3.32e-20!22;UBERON:0009854!2.57e-19!23;UBERON:0007499!9.46e-18!25;UBERON:0009497!9.46e-18!25;UBERON:0000015!9.46e-18!25;UBERON:0002423!9.46e-18!25;UBERON:0006235!9.46e-18!25;UBERON:0004161!9.46e-18!25;UBERON:0005057!4.66e-17!26;UBERON:0009856!4.66e-17!26;UBERON:0000160!8.50e-16!27;UBERON:0004921!1.14e-14!129;UBERON:0004185!1.14e-14!129;UBERON:0002365!2.92e-14!31;UBERON:0002330!2.92e-14!31;UBERON:0003929!5.27e-14!54;UBERON:0002368!1.35e-12!35;UBERON:0005409!3.21e-12!35;UBERON:0001007!5.96e-12!155;UBERON:0001555!5.96e-12!155;UBERON:0007026!5.96e-12!155;UBERON:0004119!7.91e-11!169;UBERON:0000925!7.91e-11!169;UBERON:0006595!7.91e-11!169;UBERON:0005172!1.52e-10!55;UBERON:0005173!1.52e-10!55;UBERON:0002530!8.06e-10!59;UBERON:0000949!1.01e-09!45;UBERON:0002417!1.90e-09!61;UBERON:0000916!1.90e-09!61;UBERON:0005911!6.08e-09!82;UBERON:0002108!3.74e-08!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.74e-32;4!UBERON:0000160;1.73e-20;17!UBERON:0005409;3.09e-16;22!UBERON:0004921;2.23e-11;33!UBERON:0002107;2.04e-09;19!UBERON:0006925;2.04e-09;19!UBERON:0002423;2.17e-07;25!UBERON:0001007;6.23e-07;81 | |ontology_enrichment_uberon_v019=UBERON:0002108;2.74e-32;4!UBERON:0000160;1.73e-20;17!UBERON:0005409;3.09e-16;22!UBERON:0004921;2.23e-11;33!UBERON:0002107;2.04e-09;19!UBERON:0006925;2.04e-09;19!UBERON:0002423;2.17e-07;25!UBERON:0001007;6.23e-07;81 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.74e-32,4;UBERON:0000160,1.79e-20,17;UBERON:0005409,1.86e-14,25;UBERON:0002107,1.99e-09,19;UBERON:0006925,1.99e-09,19;UBERON:0008836,1.99e-09,19;UBERON:0004921,6.01e-09,118;UBERON:0008835,2.82e-08,22;UBERON:0003894,2.82e-08,22;UBERON:0009854,5.87e-08,23;UBERON:0007499,2.14e-07,25;UBERON:0009497,2.14e-07,25;UBERON:0000015,2.14e-07,25;UBERON:0002423,2.14e-07,25;UBERON:0006235,2.14e-07,25;UBERON:0004161,2.14e-07,25;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0009856,3.78e-07,26;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160 | |||
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|short_description=p@chr11:75939371..75939376,+ | |short_description=p@chr11:75939371..75939376,+ | ||
}} | }} |
Latest revision as of 02:37, 24 July 2015
Short description: | p@chr11:75939371..75939376, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:75939371..75939376, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 2.74e-32 | 4 |
intestine | 1.79e-20 | 17 |
gastrointestinal system | 1.86e-14 | 25 |
liver | 1.99e-09 | 19 |
digestive gland | 1.99e-09 | 19 |
liver bud | 1.99e-09 | 19 |
subdivision of digestive tract | 6.01e-09 | 118 |
hepatic diverticulum | 2.82e-08 | 22 |
liver primordium | 2.82e-08 | 22 |
digestive tract diverticulum | 5.87e-08 | 23 |
epithelial sac | 2.14e-07 | 25 |
epithelium of foregut-midgut junction | 2.14e-07 | 25 |
anatomical boundary | 2.14e-07 | 25 |
hepatobiliary system | 2.14e-07 | 25 |
foregut-midgut junction | 2.14e-07 | 25 |
septum transversum | 2.14e-07 | 25 |
digestive system | 2.16e-07 | 145 |
digestive tract | 2.16e-07 | 145 |
primitive gut | 2.16e-07 | 145 |
sac | 3.78e-07 | 26 |
endoderm-derived structure | 9.48e-07 | 160 |
endoderm | 9.48e-07 | 160 |
presumptive endoderm | 9.48e-07 | 160 |