FFCP PHASE1:Hg19::chr11:70245655..70245668,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:70245655..70245668,- | |||
|description=CAGE_peak_at_chr11:70245655..70245668,- | |description=CAGE_peak_at_chr11:70245655..70245668,- | ||
|id=chr11:70245655..70245668,- | |id=chr11:70245655..70245668,- | ||
|ontology_enrichment_celltype=CL:0000066!3.86e-12!254;CL:0000076!2.91e-08!62 | |ontology_enrichment_celltype=CL:0000066!3.86e-12!254;CL:0000076!2.91e-08!62 | ||
|ontology_enrichment_celltype_v019=CL:0002535;1.54e-15;2!CL:0000076;1.64e-07;63 | |ontology_enrichment_celltype_v019=CL:0002535;1.54e-15;2!CL:0000076;1.64e-07;63 | ||
|ontology_enrichment_celltype_v019_2=CL:0000076,2.04e-16,63;CL:0002535,1.78e-15,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.16e-29;1!UBERON:0008814;2.37e-15;2!UBERON:0010056;2.37e-15;2!UBERON:0003056;1.09e-10;3 | |ontology_enrichment_development_v019=UBERON:0005425;3.16e-29;1!UBERON:0008814;2.37e-15;2!UBERON:0010056;2.37e-15;2!UBERON:0003056;1.09e-10;3 | ||
|ontology_enrichment_disease=DOID:305!6.66e-23!106;DOID:0050687!1.16e-22!143;DOID:14566!6.44e-18!239;DOID:1749!3.12e-17!14;DOID:162!4.33e-17!235;DOID:7!1.41e-08!39;DOID:201!3.47e-07!6;DOID:0060100!3.47e-07!6 | |ontology_enrichment_disease=DOID:305!6.66e-23!106;DOID:0050687!1.16e-22!143;DOID:14566!6.44e-18!239;DOID:1749!3.12e-17!14;DOID:162!4.33e-17!235;DOID:7!1.41e-08!39;DOID:201!3.47e-07!6;DOID:0060100!3.47e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.34e-72;14!DOID:4556;1.09e-10;3!DOID:4362;5.38e-07;5!DOID:3908;6.39e-07;5 | |ontology_enrichment_disease_v019=DOID:1749;2.34e-72;14!DOID:4556;1.09e-10;3!DOID:4362;5.38e-07;5!DOID:3908;6.39e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,2.65e-72,14;DOID:4556,1.20e-10,3;DOID:305,7.42e-10,106;DOID:0050687,2.42e-07,143;DOID:4362,5.70e-07,5;DOID:3908,6.77e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0003343!8.28e-08!4;UBERON:0004785!8.28e-08!4 | |ontology_enrichment_uberon=UBERON:0003343!8.28e-08!4;UBERON:0004785!8.28e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000997;7.48e-30;1!UBERON:0005056;7.48e-30;1!UBERON:0004176;7.48e-30;1!UBERON:0000941;3.16e-29;1!UBERON:0001785;3.16e-29;1!UBERON:0002464;3.16e-29;1!UBERON:0004904;3.16e-29;1!UBERON:0001021;3.16e-29;1!UBERON:0006955;1.54e-15;2!UBERON:0004801;1.54e-15;2!UBERON:0003714;2.37e-15;2!UBERON:0005162;2.37e-15;2!UBERON:0000122;2.37e-15;2!UBERON:0001723;1.09e-10;3!UBERON:0001033;1.09e-10;3!UBERON:0003343;2.43e-08;4!UBERON:0004785;2.43e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0000997;7.48e-30;1!UBERON:0005056;7.48e-30;1!UBERON:0004176;7.48e-30;1!UBERON:0000941;3.16e-29;1!UBERON:0001785;3.16e-29;1!UBERON:0002464;3.16e-29;1!UBERON:0004904;3.16e-29;1!UBERON:0001021;3.16e-29;1!UBERON:0006955;1.54e-15;2!UBERON:0004801;1.54e-15;2!UBERON:0003714;2.37e-15;2!UBERON:0005162;2.37e-15;2!UBERON:0000122;2.37e-15;2!UBERON:0001723;1.09e-10;3!UBERON:0001033;1.09e-10;3!UBERON:0003343;2.43e-08;4!UBERON:0004785;2.43e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,7.48e-30,1;UBERON:0005056,7.48e-30,1;UBERON:0000941,2.37e-29,1;UBERON:0001785,2.37e-29,1;UBERON:0002464,2.37e-29,1;UBERON:0004904,2.37e-29,1;UBERON:0001021,2.37e-29,1;UBERON:0003902,2.37e-29,1;UBERON:0005425,2.37e-29,1;UBERON:0006955,1.78e-15,2;UBERON:0004801,1.78e-15,2;UBERON:0003714,2.05e-15,2;UBERON:0005162,2.05e-15,2;UBERON:0000122,2.05e-15,2;UBERON:0001723,1.09e-10,3;UBERON:0001033,1.09e-10,3;UBERON:0010056,1.09e-10,3;UBERON:0001781,2.26e-08,4;UBERON:0003343,2.43e-08,4;UBERON:0004785,2.43e-08,4 | |||
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| ||
|short_description=p@chr11:70245655..70245668,- | |short_description=p@chr11:70245655..70245668,- | ||
}} | }} |
Latest revision as of 02:03, 24 July 2015
Short description: | p@chr11:70245655..70245668, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:70245655..70245668, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 2.04e-16 | 63 |
epithelial cell of cervix | 1.78e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 7.48e-30 | 1 |
external female genitalia | 7.48e-30 | 1 |
cranial nerve II | 2.37e-29 | 1 |
cranial nerve | 2.37e-29 | 1 |
nerve trunk | 2.37e-29 | 1 |
nerve connecting eye with brain | 2.37e-29 | 1 |
nerve | 2.37e-29 | 1 |
retinal neural layer | 2.37e-29 | 1 |
presumptive neural retina | 2.37e-29 | 1 |
uterine epithelium | 1.78e-15 | 2 |
cervix epithelium | 1.78e-15 | 2 |
neural tissue | 2.05e-15 | 2 |
multi cell component structure | 2.05e-15 | 2 |
neuron projection bundle | 2.05e-15 | 2 |
tongue | 1.09e-10 | 3 |
gustatory system | 1.09e-10 | 3 |
future tongue | 1.09e-10 | 3 |
layer of retina | 2.26e-08 | 4 |
mucosa of oral region | 2.43e-08 | 4 |
respiratory system mucosa | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.65e-72 | 14 |
lung large cell carcinoma | 1.20e-10 | 3 |
carcinoma | 7.42e-10 | 106 |
cell type cancer | 2.42e-07 | 143 |
cervical cancer | 5.70e-07 | 5 |
non-small cell lung carcinoma | 6.77e-07 | 5 |