FFCP PHASE1:Hg19::chr11:66118985..66118995,+: Difference between revisions
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|id=chr11:66118985..66118995,+
|short_description=p@chr11:66118985..66118995,+
|description=CAGE_peak_at_chr11:66118985..66118995,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:66118985..66118995,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_at_chr11:66118985..66118995,+ | |||
|id=chr11:66118985..66118995,+ | |||
|ontology_enrichment_celltype=CL:0000181!4.96e-22!12;CL:0000417!4.96e-22!12;CL:0000668!4.96e-22!12;CL:0000414!4.96e-22!12;CL:0000412!4.96e-22!12;CL:0000182!4.96e-22!12;CL:0000223!6.91e-09!59;CL:0002563!2.15e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.25e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.87e-12,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001155!1.44e-20!9;UBERON:0000160!1.79e-20!27;UBERON:0009854!1.48e-19!23;UBERON:0002107!1.91e-18!19;UBERON:0006925!1.91e-18!19;UBERON:0008836!1.91e-18!19;UBERON:0009856!3.54e-17!26;UBERON:0004921!3.67e-17!129;UBERON:0004185!3.67e-17!129;UBERON:0000059!8.24e-17!11;UBERON:0008835!7.94e-16!22;UBERON:0003894!7.94e-16!22;UBERON:0005409!1.28e-15!35;UBERON:0003929!1.11e-14!54;UBERON:0007499!7.81e-14!25;UBERON:0009497!7.81e-14!25;UBERON:0000015!7.81e-14!25;UBERON:0002423!7.81e-14!25;UBERON:0006235!7.81e-14!25;UBERON:0004161!7.81e-14!25;UBERON:0001007!1.04e-13!155;UBERON:0001555!1.04e-13!155;UBERON:0007026!1.04e-13!155;UBERON:0005057!2.85e-13!26;UBERON:0004119!2.77e-12!169;UBERON:0000925!2.77e-12!169;UBERON:0006595!2.77e-12!169;UBERON:0002365!5.30e-11!31;UBERON:0002330!5.30e-11!31;UBERON:0005911!8.20e-11!82;UBERON:0002368!1.19e-09!35;UBERON:0002530!8.49e-09!59;UBERON:0001154!1.53e-08!1;UBERON:0001153!1.53e-08!1;UBERON:0001242!2.15e-08!4;UBERON:0001262!2.15e-08!4;UBERON:0004786!2.15e-08!4;UBERON:0004808!2.15e-08!4;UBERON:0001277!2.15e-08!4;UBERON:0000949!2.51e-07!45;UBERON:0003350!7.05e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.88e-30;17!UBERON:0002108;1.91e-28;4!UBERON:0005409;8.12e-24;22!UBERON:0004921;4.83e-14;33!UBERON:0001007;4.31e-08;81!UBERON:0002107;8.58e-08;19!UBERON:0006925;8.58e-08;19!UBERON:0001155;9.04e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.74e-30,17;UBERON:0002108,2.10e-28,4;UBERON:0005409,4.44e-21,25;UBERON:0004921,6.32e-12,118;UBERON:0001007,1.54e-09,145;UBERON:0001555,1.54e-09,145;UBERON:0007026,1.54e-09,145;UBERON:0004119,1.49e-08,160;UBERON:0000925,1.49e-08,160;UBERON:0006595,1.49e-08,160;UBERON:0002107,8.19e-08,19;UBERON:0006925,8.19e-08,19;UBERON:0008836,8.19e-08,19;UBERON:0001155,8.31e-08,9;UBERON:0011216,4.28e-07,223;UBERON:0003929,5.06e-07,54;UBERON:0008835,8.10e-07,22;UBERON:0003894,8.10e-07,22 | |||
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|short_description=p@chr11:66118985..66118995,+ | |||
}} | }} |
Latest revision as of 01:03, 24 July 2015
Short description: | p@chr11:66118985..66118995, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:66118985..66118995, + |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.87e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.74e-30 | 17 |
small intestine | 2.10e-28 | 4 |
gastrointestinal system | 4.44e-21 | 25 |
subdivision of digestive tract | 6.32e-12 | 118 |
digestive system | 1.54e-09 | 145 |
digestive tract | 1.54e-09 | 145 |
primitive gut | 1.54e-09 | 145 |
endoderm-derived structure | 1.49e-08 | 160 |
endoderm | 1.49e-08 | 160 |
presumptive endoderm | 1.49e-08 | 160 |
liver | 8.19e-08 | 19 |
digestive gland | 8.19e-08 | 19 |
liver bud | 8.19e-08 | 19 |
colon | 8.31e-08 | 9 |
organ system subdivision | 4.28e-07 | 223 |
gut epithelium | 5.06e-07 | 54 |
hepatic diverticulum | 8.10e-07 | 22 |
liver primordium | 8.10e-07 | 22 |