FFCP PHASE1:Hg19::chr11:65660338..65660366,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:65660338..65660366,- | |||
|coexpression_cluster_id=C3190 | |||
|description=CAGE_peak_at_chr11:65660338..65660366,- | |description=CAGE_peak_at_chr11:65660338..65660366,- | ||
|id=chr11:65660338..65660366,- | |id=chr11:65660338..65660366,- | ||
|ontology_enrichment_celltype=CL:0000012!6.56e-36!682;CL:0000548!1.25e-35!679;CL:0000004!1.25e-35!679;CL:0000255!1.25e-35!679;CL:0000144!6.01e-27!625;CL:0002371!2.04e-24!591;CL:0000003!2.89e-23!722;CL:0000220!3.89e-20!246;CL:0002321!8.83e-20!248;CL:0000055!1.83e-19!180;CL:0000063!2.45e-18!578;CL:0000066!1.47e-14!254;CL:0000057!8.25e-13!75;CL:0000222!1.54e-12!119;CL:0000076!3.41e-09!62;CL:0000192!8.74e-07!42;CL:0000514!8.74e-07!42 | |ontology_enrichment_celltype=CL:0000012!6.56e-36!682;CL:0000548!1.25e-35!679;CL:0000004!1.25e-35!679;CL:0000255!1.25e-35!679;CL:0000144!6.01e-27!625;CL:0002371!2.04e-24!591;CL:0000003!2.89e-23!722;CL:0000220!3.89e-20!246;CL:0002321!8.83e-20!248;CL:0000055!1.83e-19!180;CL:0000063!2.45e-18!578;CL:0000066!1.47e-14!254;CL:0000057!8.25e-13!75;CL:0000222!1.54e-12!119;CL:0000076!3.41e-09!62;CL:0000192!8.74e-07!42;CL:0000514!8.74e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.10e-07;33!CL:0002057;1.10e-07;33!CL:1000497;1.80e-07;17!CL:0002518;1.80e-07;17!CL:0002620;4.76e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.86e-14,250;CL:0000057,9.47e-13,76;CL:0000066,5.11e-10,253;CL:0000222,9.08e-10,121;CL:0000076,8.85e-08,63;CL:1000497,3.45e-07,17;CL:0002518,3.45e-07,17;CL:0002620,9.84e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!2.45e-11!95;UBERON:0005256!3.60e-10!143;UBERON:0000926!4.32e-10!448;UBERON:0004120!4.32e-10!448;UBERON:0006603!4.32e-10!448;UBERON:0002100!2.21e-09!216;UBERON:0000486!3.91e-09!82;UBERON:0000467!8.40e-09!625;UBERON:0000480!9.83e-09!626;UBERON:0000914!2.06e-08!83;UBERON:0002329!2.06e-08!83;UBERON:0003077!2.06e-08!83;UBERON:0003059!2.06e-08!83;UBERON:0007282!2.06e-08!83;UBERON:0009618!2.06e-08!83;UBERON:0007285!2.06e-08!83;UBERON:0001637!2.70e-08!42;UBERON:0003509!2.70e-08!42;UBERON:0004572!2.70e-08!42;UBERON:0002199!2.88e-08!45;UBERON:0002416!2.88e-08!45;UBERON:0003914!4.41e-08!118;UBERON:0002049!1.32e-07!79;UBERON:0007798!1.32e-07!79;UBERON:0000468!1.47e-07!659;UBERON:0004290!2.21e-07!70;UBERON:0002097!2.34e-07!40;UBERON:0000055!2.72e-07!69;UBERON:0001981!4.05e-07!60;UBERON:0007500!4.05e-07!60;UBERON:0004537!4.05e-07!60;UBERON:0006965!4.05e-07!60;UBERON:0004573!7.88e-07!33;UBERON:0004571!7.88e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,7.32e-11,99;UBERON:0002100,4.84e-09,199;UBERON:0002199,1.96e-08,46;UBERON:0002416,1.96e-08,46;UBERON:0000486,5.45e-08,83;UBERON:0007503,6.15e-08,78;UBERON:0001637,9.71e-08,42;UBERON:0003509,9.71e-08,42;UBERON:0004572,9.71e-08,42;UBERON:0002097,1.50e-07,41;UBERON:0000926,6.29e-07,315;UBERON:0004120,6.29e-07,315;UBERON:0006603,6.29e-07,315;UBERON:0003914,8.15e-07,117;UBERON:0000490,9.59e-07,148 | |||
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| ||
|short_description=p@chr11:65660338..65660366,- | |short_description=p@chr11:65660338..65660366,- | ||
}} | }} |
Latest revision as of 00:51, 24 July 2015
Short description: | p@chr11:65660338..65660366, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:65660338..65660366, - |
Coexpression cluster: | C3190_papillary_leiomyoma_mesothelioma_meningioma_myxofibrosarcoma_squamous_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.86e-14 | 250 |
fibroblast | 9.47e-13 | 76 |
epithelial cell | 5.11e-10 | 253 |
mesodermal cell | 9.08e-10 | 121 |
squamous epithelial cell | 8.85e-08 | 63 |
kidney cell | 3.45e-07 | 17 |
kidney epithelial cell | 3.45e-07 | 17 |
skin fibroblast | 9.84e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
surface structure | 7.32e-11 | 99 |
trunk | 4.84e-09 | 199 |
integument | 1.96e-08 | 46 |
integumental system | 1.96e-08 | 46 |
multilaminar epithelium | 5.45e-08 | 83 |
epithelial vesicle | 6.15e-08 | 78 |
artery | 9.71e-08 | 42 |
arterial blood vessel | 9.71e-08 | 42 |
arterial system | 9.71e-08 | 42 |
skin of body | 1.50e-07 | 41 |
mesoderm | 6.29e-07 | 315 |
mesoderm-derived structure | 6.29e-07 | 315 |
presumptive mesoderm | 6.29e-07 | 315 |
epithelial tube | 8.15e-07 | 117 |
unilaminar epithelium | 9.59e-07 | 148 |