FFCP PHASE1:Hg19::chr11:5255440..5255449,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:5255440..5255449,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_at_chr11:5255440..5255449,- | |description=CAGE_peak_at_chr11:5255440..5255449,- | ||
|id=chr11:5255440..5255449,- | |id=chr11:5255440..5255449,- | ||
|ontology_enrichment_celltype=CL:0000764!3.99e-41!2;CL:0000765!3.99e-41!2;CL:0000050!3.99e-41!2;CL:0000038!3.99e-41!2;CL:0000558!3.99e-41!2;CL:0000547!3.99e-41!2;CL:0000549!3.99e-41!2;CL:0000550!3.99e-41!2;CL:0000552!3.99e-41!2;CL:0000784!7.76e-08!3 | |ontology_enrichment_celltype=CL:0000764!3.99e-41!2;CL:0000765!3.99e-41!2;CL:0000050!3.99e-41!2;CL:0000038!3.99e-41!2;CL:0000558!3.99e-41!2;CL:0000547!3.99e-41!2;CL:0000549!3.99e-41!2;CL:0000550!3.99e-41!2;CL:0000552!3.99e-41!2;CL:0000784!7.76e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000764;7.41e-67;2!CL:0000558;7.41e-67;2!CL:0002563;1.57e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,7.41e-67,2;CL:0000765,7.41e-67,2;CL:0000050,7.41e-67,2;CL:0000038,7.41e-67,2;CL:0000558,7.41e-67,2;CL:0000547,7.41e-67,2;CL:0000549,7.41e-67,2;CL:0000550,7.41e-67,2;CL:0000552,7.41e-67,2;CL:0002563,1.57e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.83e-33!15;UBERON:0000179!4.83e-33!15;UBERON:0000463!4.83e-33!15;UBERON:0007023!2.99e-08!115;UBERON:0002390!8.02e-07!102;UBERON:0003061!8.02e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.91e-20;15!UBERON:0000179;1.91e-20;15!UBERON:0000463;1.91e-20;15!UBERON:0002390;1.43e-09;32!UBERON:0001242;1.57e-09;4!UBERON:0001262;1.57e-09;4!UBERON:0004786;1.57e-09;4!UBERON:0004808;1.57e-09;4!UBERON:0001277;1.57e-09;4!UBERON:0002193;6.33e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.91e-20,15;UBERON:0000179,1.91e-20,15;UBERON:0000463,1.91e-20,15;UBERON:0001242,1.57e-09,4;UBERON:0001262,1.57e-09,4;UBERON:0004786,1.57e-09,4;UBERON:0004808,1.57e-09,4;UBERON:0001277,1.57e-09,4;UBERON:0007023,1.09e-07,114 | |||
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|short_description=p@chr11:5255440..5255449,- | |short_description=p@chr11:5255440..5255449,- | ||
}} | }} |
Latest revision as of 22:49, 23 July 2015
Short description: | p@chr11:5255440..5255449, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:5255440..5255449, - |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 7.41e-67 | 2 |
erythroblast | 7.41e-67 | 2 |
megakaryocyte-erythroid progenitor cell | 7.41e-67 | 2 |
erythroid progenitor cell | 7.41e-67 | 2 |
reticulocyte | 7.41e-67 | 2 |
proerythroblast | 7.41e-67 | 2 |
basophilic erythroblast | 7.41e-67 | 2 |
polychromatophilic erythroblast | 7.41e-67 | 2 |
orthochromatic erythroblast | 7.41e-67 | 2 |
intestinal epithelial cell | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
blood | 1.91e-20 | 15 |
haemolymphatic fluid | 1.91e-20 | 15 |
organism substance | 1.91e-20 | 15 |
intestinal mucosa | 1.57e-09 | 4 |
wall of intestine | 1.57e-09 | 4 |
gastrointestinal system mucosa | 1.57e-09 | 4 |
gastrointestinal system epithelium | 1.57e-09 | 4 |
intestinal epithelium | 1.57e-09 | 4 |
adult organism | 1.09e-07 | 114 |