FFCP PHASE1:Hg19::chr11:46405274..46405297,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:46405274..46405297,- | |||
|coexpression_cluster_id=C2134 | |coexpression_cluster_id=C2134 | ||
|description=CAGE_peak_at_chr11:46405274..46405297,- | |description=CAGE_peak_at_chr11:46405274..46405297,- | ||
|id=chr11:46405274..46405297,- | |id=chr11:46405274..46405297,- | ||
|ontology_enrichment_celltype=CL:0000066!8.86e-11!254;CL:0002321!1.48e-09!248;CL:0000220!3.56e-09!246 | |ontology_enrichment_celltype=CL:0000066!8.86e-11!254;CL:0002321!1.48e-09!248;CL:0000220!3.56e-09!246 | ||
|ontology_enrichment_celltype_v019=CL:0000128;4.49e-10;7!CL:0000126;4.49e-10;7!CL:0000127;4.49e-10;7!CL:0002319;3.29e-08;25!CL:0002605;3.33e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,3.92e-10,7;CL:0000126,3.92e-10,7;CL:0000127,3.92e-10,7;CL:0002453,3.92e-10,7;CL:0002319,2.28e-08,25;CL:0002605,3.99e-07,3;CL:0000066,4.34e-07,253;CL:0000064,6.96e-07,3;CL:0000067,6.96e-07,3;CL:0005012,6.96e-07,3;CL:0002304,6.96e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!6.36e-08!143 | |ontology_enrichment_disease=DOID:0050687!6.36e-08!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.32e-07!347 | |ontology_enrichment_uberon=UBERON:0000481!1.32e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0002203;8.45e-11;6!UBERON:0001768;8.45e-11;6!UBERON:0002200;8.45e-11;6!UBERON:0007625;4.13e-10;11!UBERON:0000970;4.37e-09;20!UBERON:0001456;7.97e-09;21!UBERON:0002104;1.56e-08;21!UBERON:0000019;5.11e-08;19!UBERON:0000047;5.11e-08;19!UBERON:0004088;5.11e-08;19!UBERON:0010230;5.11e-08;19!UBERON:0000488;5.17e-08;4!UBERON:0000020;1.40e-07;23!UBERON:0001032;3.66e-07;24!UBERON:0004456;3.66e-07;24!UBERON:0001801;4.08e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002203,1.44e-10,6;UBERON:0001768,1.44e-10,6;UBERON:0002200,1.44e-10,6;UBERON:0007625,3.92e-10,11;UBERON:0000970,2.36e-08,21;UBERON:0002104,2.36e-08,21;UBERON:0001456,3.20e-08,22;UBERON:0000488,5.27e-08,4;UBERON:0000019,2.00e-07,20;UBERON:0000047,2.00e-07,20;UBERON:0010312,2.00e-07,20;UBERON:0004088,2.00e-07,20;UBERON:0010230,2.00e-07,20;UBERON:0003072,2.00e-07,20;UBERON:0004128,2.00e-07,20;UBERON:0003071,2.00e-07,20;UBERON:0001801,4.91e-07,14;UBERON:0000020,5.20e-07,24;UBERON:0001032,5.20e-07,24;UBERON:0004456,5.20e-07,24;UBERON:0001778,6.96e-07,3;UBERON:0001775,6.96e-07,3 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0.655324116390517,0.527533956456907,0.495065411840187,0.994192127183747,0,1.20538905604795,0.730310090387373,0.487932798790507,0.369363174230364,1.63200552995402,3.44800193625897,3.14859585844162,2.46373965131192,2.00868223351684,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0.670700859703636,0.895037932904712,0.361439152384566,0,0.144846518960824,0,0,2.3633704291017,2.4390233720882,1.75669571386252,0.523916301990851,0,0.370784442784429,0,0,0,0,0,0,0,0,0.694281003215189,0.56530794192401,1.25849830862972,0.550236083880135,0,1.55050055501597,0.35576626268671,0,0.805658634218294,0,1.95249646038536,0,0.81014194788176,0.267899184852239,0,0.225222960966644,0,0,0.549605231791222,0,0,0,0,0.12663051166458,0,0.286836620748814,0.709336764396714,0,0,0,0.311211035399766,0.134710672069688,0,0.151357427644931,0.576175924479999,0.234321431833797,0.312160076830321,0,0,0,0,0,0.408308342509787,0.737005903870608,0,2.37600571456411,1.7308685049499,0,0,0.841680569770331,0.125118519871964,0,0,0.30648779579902,0.901428353439581,0.567160915800105,0,0.213557388818567,0.211931901159562,0.600182192168805,0.515262646192195,0,0,0.168776332241266,0,0,0.276149695926898,0,0,0.201504196455281,0.169560592310488,0,0,0,0.609868530647977,0.530119073285941,0.69716365721711,0.829288440122964,2.01856680700503,2.18986415445498,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.8231480226628,1.47008711385542,0,0,0,0,0.614942192715568,1.02940686179115,0,0,0,0,0.977424915930974,0,0,1.85488647960123,0.117408694235822,2.30986316417718,0.925971025153221,1.52203321787679,1.58040879591855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0.26593811658487,2.08014873822732,2.05765899409714,4.25547396069835,0,0.285955987316295,4.88359444852299,1.64648067356154,0,0.710783897485092,1.58390374586686,0.602878754119172,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0.254094624222463,0,0.773288812777695,0.502548796003046,2.55175500661265,0,0,0,1.2269149171914,1.50051156317903,1.08506009479894,0.207970861530807,0,0,0.117141414992713,0,0,0,0.664225598535437,0.184369168541703,0.434418072340414,0.195801157462741,1.37257369524342,0,0,0,0.909382714338778,4.99306318531491,2.41912234663744,0,0,0,0,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0.246381468041427,0,0.232420756919918,2.53804844142407,0.200506470303285,0.644566922551274,0.68888668898764,0.728364672026868,0.917870904715969,0.451199612907412,0.616122696835318,0.784349769176855,0,0.316654886678627,1.13733384070897,0.510281115829547,0.431831832204279,0,1.62567862526312,1.50506932156456,0,0,1.11937377361089,0,0,3.07740150139667,2.29610251989794,0.650756789328606,0.103041011647722,0.732555718546747,0.41254749960294,0,0,0,1.54673149267395,0,0,0.137836572484531,0.537101224341368,0.435050081742686,0.596586391912706,1.51354460599453,0.661139661443912,0,0.127612712494584,0.2023155617111,0,0,0,2.15623506123262,0.532306030317022,0,0,0,0,0.632758849437452,0.571890581771475,0.767693373934002,0.855877976067841,0,0,0.899362287916574,1.37268514868027,0.589062011728432,0.404364963146632,0,0.842516912477962,1.46290121726877,1.94970791705028,0,0.136499911407986,0.707027159768564,0,0,0,0,0,3.27947376023316,0.202910376962704,0,0.563391205064483,0.573645408816206,1.27723753317057,0,0.354761064070598,0.844430541190656,0,1.13841952129715,1.39973888097993,0,0,0,0,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0.735120647943095,0.185803175125719,0.865615277858669,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0,0.890894042497916,0,0,0,0.556543525114529,0,0.211125408127993,0,0,0.503865495708552,1.43176155503017,0,0.311039587661807,0,1.43216939740487,0,0,0,0,0,0,0,0,0,0,2.73104275885199,0.254253650292766,0,0.344743373241465,0,1.38899995946634,0,0.120596438625408,0,0,0,0,0.10893846351899,0.139423744278603,0.692552326534174,0,0.23056390438806,0,1.19512109114209,0.31900115973192,0.274792780205587,0,0,0.31396051279005,0,0,0.19606253431774,0.167821586975843,0.189753732724185,0,0,0,0.706765357169704,0,0,0.353830258013357,0.611030144933625,0,0,0.104421949505455,0,0,0,0,2.15231080825299,0,0,1.20990716048664,0.30607276163049,0.31593289814244,0.60129367765797,0.414752765588989,0,0,0,0,0,4.16024019039416,0.867798691675654,0.0979923974143777,0.435296032902013,0.17472666824203,0.859930162358083,0,0,0,0,1.76512253383001,1.12990370390266,0,0,0.0633107959558787,1.36885967914362,3.04603516955828,0.213452994739353,0.599428828746391,0.288180834308212,0.572682980829578,0.343189995723929,0.14405479798815,0.248505071130865,0.707082103850386,0,0,1.4279750469085,2.8895058990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| ||
|short_description=p@chr11:46405274..46405297,- | |short_description=p@chr11:46405274..46405297,- | ||
}} | }} |
Latest revision as of 22:28, 23 July 2015
Short description: | p@chr11:46405274..46405297, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:46405274..46405297, - |
Coexpression cluster: | C2134_normal_liposarcoma_bronchial_small_Placental_endometrial_Endothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 3.92e-10 | 7 |
macroglial cell | 3.92e-10 | 7 |
astrocyte | 3.92e-10 | 7 |
oligodendrocyte precursor cell | 3.92e-10 | 7 |
neural cell | 2.28e-08 | 25 |
astrocyte of the cerebral cortex | 3.99e-07 | 3 |
epithelial cell | 4.34e-07 | 253 |
ciliated cell | 6.96e-07 | 3 |
ciliated epithelial cell | 6.96e-07 | 3 |
multi-ciliated epithelial cell | 6.96e-07 | 3 |
non-pigmented ciliary epithelial cell | 6.96e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vasculature of eye | 1.44e-10 | 6 |
uvea | 1.44e-10 | 6 |
vasculature of head | 1.44e-10 | 6 |
pigment epithelium of eye | 3.92e-10 | 11 |
eye | 2.36e-08 | 21 |
visual system | 2.36e-08 | 21 |
face | 3.20e-08 | 22 |
atypical epithelium | 5.27e-08 | 4 |
camera-type eye | 2.00e-07 | 20 |
simple eye | 2.00e-07 | 20 |
immature eye | 2.00e-07 | 20 |
ocular region | 2.00e-07 | 20 |
eyeball of camera-type eye | 2.00e-07 | 20 |
optic cup | 2.00e-07 | 20 |
optic vesicle | 2.00e-07 | 20 |
eye primordium | 2.00e-07 | 20 |
anterior segment of eyeball | 4.91e-07 | 14 |
sense organ | 5.20e-07 | 24 |
sensory system | 5.20e-07 | 24 |
entire sense organ system | 5.20e-07 | 24 |
ciliary epithelium | 6.96e-07 | 3 |
ciliary body | 6.96e-07 | 3 |