FFCP PHASE1:Hg19::chr11:35252601..35252624,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:35252601..35252624,+ | |||
|description=CAGE_peak_at_chr11:35252601..35252624,+ | |description=CAGE_peak_at_chr11:35252601..35252624,+ | ||
|id=chr11:35252601..35252624,+ | |id=chr11:35252601..35252624,+ | ||
|ontology_enrichment_celltype=CL:0000557!4.84e-16!71;CL:0000766!9.50e-16!76;CL:0000839!3.36e-15!70;CL:0002009!1.49e-14!65;CL:0002194!2.24e-14!63;CL:0000576!2.24e-14!63;CL:0000040!2.24e-14!63;CL:0000559!2.24e-14!63;CL:0002057!3.55e-14!42;CL:0000860!4.27e-13!45;CL:0000055!3.50e-09!180;CL:0000048!6.11e-09!430;CL:0000723!8.30e-09!436;CL:0000219!1.68e-08!390;CL:0000134!5.29e-08!358;CL:0002371!5.55e-08!591;CL:0002320!7.55e-08!365;CL:0000034!1.25e-07!444;CL:0000057!2.35e-07!75;CL:0002620!2.37e-07!23;CL:0000763!4.19e-07!112;CL:0000049!4.19e-07!112 | |ontology_enrichment_celltype=CL:0000557!4.84e-16!71;CL:0000766!9.50e-16!76;CL:0000839!3.36e-15!70;CL:0002009!1.49e-14!65;CL:0002194!2.24e-14!63;CL:0000576!2.24e-14!63;CL:0000040!2.24e-14!63;CL:0000559!2.24e-14!63;CL:0002057!3.55e-14!42;CL:0000860!4.27e-13!45;CL:0000055!3.50e-09!180;CL:0000048!6.11e-09!430;CL:0000723!8.30e-09!436;CL:0000219!1.68e-08!390;CL:0000134!5.29e-08!358;CL:0002371!5.55e-08!591;CL:0002320!7.55e-08!365;CL:0000034!1.25e-07!444;CL:0000057!2.35e-07!75;CL:0002620!2.37e-07!23;CL:0000763!4.19e-07!112;CL:0000049!4.19e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.87e-19;33!CL:0002057;1.87e-19;33!CL:0000473;1.03e-15;39!CL:0000234;1.03e-15;39!CL:0000576;1.01e-08;48!CL:0002620;2.25e-08;23!CL:0000766;3.70e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,4.16e-17,66;CL:0000557,1.22e-16,67;CL:0000473,3.20e-16,48;CL:0000234,3.20e-16,48;CL:0000860,7.83e-16,42;CL:0002057,7.83e-16,42;CL:0000766,1.39e-15,72;CL:0002194,2.24e-15,59;CL:0000576,2.24e-15,59;CL:0000040,2.24e-15,59;CL:0000559,2.24e-15,59;CL:0002009,1.85e-14,61;CL:0000048,8.02e-11,427;CL:0000219,9.08e-11,386;CL:0000723,1.23e-10,433;CL:0000034,8.71e-10,441;CL:0000134,3.04e-09,354;CL:0002320,7.72e-09,361;CL:0002620,1.49e-08,23;CL:0000057,8.09e-08,76 | |||
|ontology_enrichment_development_v019=CL:0002057;7.24e-12;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.99e-13!80;UBERON:0002204!5.16e-12!167;UBERON:0001474!1.32e-10!86;UBERON:0004765!1.52e-10!101;UBERON:0001434!1.52e-10!101;UBERON:0002390!5.54e-10!102;UBERON:0003061!5.54e-10!102;UBERON:0002193!1.37e-08!112;UBERON:0003102!1.75e-07!95;UBERON:0002384!3.19e-07!375;UBERON:0002199!4.41e-07!45;UBERON:0002416!4.41e-07!45 | |ontology_enrichment_uberon=UBERON:0002371!4.99e-13!80;UBERON:0002204!5.16e-12!167;UBERON:0001474!1.32e-10!86;UBERON:0004765!1.52e-10!101;UBERON:0001434!1.52e-10!101;UBERON:0002390!5.54e-10!102;UBERON:0003061!5.54e-10!102;UBERON:0002193!1.37e-08!112;UBERON:0003102!1.75e-07!95;UBERON:0002384!3.19e-07!375;UBERON:0002199!4.41e-07!45;UBERON:0002416!4.41e-07!45 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.03e-13,76;UBERON:0001474,1.02e-11,82;UBERON:0002204,1.13e-11,167;UBERON:0004765,1.63e-11,90;UBERON:0001434,1.37e-10,100;UBERON:0002405,1.74e-09,93;UBERON:0002390,5.79e-09,98;UBERON:0003061,5.79e-09,98;UBERON:0002199,1.09e-08,46;UBERON:0002416,1.09e-08,46;UBERON:0002384,3.95e-08,371;UBERON:0002193,1.50e-07,108;UBERON:0002097,5.04e-07,41 | |||
|phase1_expression=0.363356758541113,1.49870366723688,1.12763523276777,0,0,0,0,3.79031924056099,1.30592814099919,0,0,0,0.527533956456907,0.37129905888014,1.32558950291166,2.6893005858071,1.20538905604795,0,1.46379839637152,0.369363174230364,0,0.313454721478088,1.14494394852423,1.23186982565596,0.753255837568817,0.0764134057479513,0.246301768349837,0,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0.369754010166788,0,0,0,0.553995408531877,0.200544447470142,0.434021741431704,0.447830948479849,1.6194683300949,0.77272670290256,4.21654892460738,1.51150377475524,0.970336244751265,1.16214518452842,1.6446715520873,2.16794459626573,1.43846196161075,1.0246428261164,1.6553756092201,3.10271112662957,2.5819387343353,1.35426486594342,4.1413314699373,4.09359225086769,3.14612878223118,11.9372718024652,3.20929027076094,7.67204550958849,1.64925650093358,2.39356389145958,2.55734850319616,6.09439401120026,1.70215567407342,1.86846674698672,1.7587406567972,2.08593167368081,1.3031330682307,4.84319602106695,2.20966581592539,1.89877432464531,0.422510572623884,0.850417199860174,1.04829322754188,1.46027220490444,1.05123824989054,0.64290234678832,0.285012743741249,0.79566670879636,0.365328307529268,0,1.09227722252426,0,0,0,0,0.661044872784862,0,0,0.587237189370939,1.14681968437569,0,0,0.263384084775077,0.196709770113833,1.57204305099666,1.02800749499755,0.167186495390678,0.651844533267181,0,0,0.334231370655521,0.589211814949674,0.221533894583621,1.35401931882508,0.640456598628376,0.520237390239513,0.822189523018381,0,2.31842468588042,1.18629250529648,0.535081656179426,2.09071047609954,0.339928028092699,0,0.34362744548263,1.01207876807801,0.318565414324097,0,0,0.752875595388864,0.639933055772092,0,0.473554504088034,0,0.80642697289893,1.87208137048455,0.579297615531196,0,0,0,5.06014813338393,1.50401373190767,5.79386075843295,0.795285947051099,0.973269740605272,0.283604451492204,0.221729397462564,0.351339142772504,0.261958150995425,0.728590576585084,0.370784442784429,1.62273696827342,2.78607579678828,1.99436940778298,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0.825354125820202,0.208994966536811,0,0,0,0,0.760272105718513,0.24406205754817,1.47065232138347,0,0,0,0,0,0,0,0,0,0,0.496971951695318,1.77282716330412,1.19168262731897,4.30254931123221,3.90135220418193,0,0,0.74000264525148,0.311211035399766,0.134710672069688,0.326923806226917,0,1.15235184896,0,1.24864030732128,0.570471821544449,2.54062756938062,0.352303495931295,0.323745888736263,0.280901613404497,0.204154171254893,0.491337269247072,0.723280468230358,7.12801714369232,1.48360157567134,0.910161361938026,0.718618141816238,0.168336113954066,0.125118519871964,0.554128230968366,0,0.612975591598039,0.45071417671979,0,4.48474089222155,1.92201649936711,0.847727604638247,7.20218630602566,2.26715564324566,2.06112432036503,2.04728541964749,5.56961896396179,1.75386609290158,2.77677151668526,2.02509777013059,5.01102776138317,5.68015348026583,2.72030665214629,1.52604533079439,1.54608682530637,2.18196896472668,0.860413786167011,0,0.132529768321485,0,0,0,0,0,1.28648187638577,1.38134921352481,0.464367928031979,1.44375896333917,0.354920400119532,0.505754070234305,0,0,0.653638332277218,0,0.539325232640658,0.196221465125346,0,0,0,0,0,0,0,0,0,0,1.02940686179115,2.63400684980701,0,0.603173834469785,0.740707561268237,0,0,2.88662684050547,0.34779121492523,0,0,0.462985512576611,0,0.790204397959275,0,0.984868024349589,1.63802985597466,0.743155811443641,0,1.6798212819886,1.70130116690864,0.895585227028483,1.45316969256981,1.53353071666084,0.492663237895943,3.69803422855549,7.46381215946779,5.18831832301061,4.16600030307054,1.0159663086747,3.05590740446622,4.68869788840188,1.71072446022705,1.95372236136315,1.20137223137567,2.5724378936752,0.336393253036082,0,0.4400297149257,0.517086863031111,0,0,1.32969058292435,1.04007436911366,0,0,0.266422179016099,0.714889968290738,0,0,0.325736184293735,0,0,0.904318131178758,0,1.19967589418468,2.43247561282381,0.502257091432126,8.43335757932127,1.19812427745791,0,0,1.73737568001095,1.2328579353023,0.179060963239896,0.560425719967636,0.591092280605782,0.215627574859517,0.898401253958239,8.89331184778622,0,1.54657762555539,0.502548796003046,0,0.749007023947182,2.99161459204025,0.828831026872071,0.36807447515742,0.500170521059677,0.271265023699736,1.45579603071565,2.49800584316026,1.57702415033935,0.468565659970853,0.902838299183157,0,0,1.32845119707087,0.184369168541703,4.17041349446798,0,0,0.413536052245775,0.647142602455851,0.426910231213777,0,0,0,2.23297027036899,0.61384789315225,1.12264037773229,0.768834895534206,0,1.28683136914886,1.48418066444991,2.15893571323718,1.77561725313127,2.21743321237285,3.11552657510173,1.97557643381931,0.241718899183244,4.0101294060657,0.552485933615378,2.98517565227978,1.45672934405374,4.19598127870157,0,0.770153371044148,0,0,0.949964660035881,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0,0,0,0.256450125116389,0.656029291399411,0,1.03041011647722,0,0,0,0.650060246036521,0,3.48014585851639,0.4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|phase1_expression=0.363356758541113,1.49870366723688,1.12763523276777,0,0,0,0,3.79031924056099,1.30592814099919,0,0,0,0.527533956456907,0.37129905888014,1.32558950291166,2.6893005858071,1.20538905604795,0,1.46379839637152,0.369363174230364,0,0.313454721478088,1.14494394852423,1.23186982565596,0.753255837568817,0.0764134057479513,0.246301768349837,0,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0.369754010166788,0,0,0,0.553995408531877,0.200544447470142,0.434021741431704,0.447830948479849,1.6194683300949,0.77272670290256,4.21654892460738,1.51150377475524,0.970336244751265,1.16214518452842,1.6446715520873,2.16794459626573,1.43846196161075,1.0246428261164,1.6553756092201,3.10271112662957,2.5819387343353,1.35426486594342,4.1413314699373,4.09359225086769,3.14612878223118,11.9372718024652,3.20929027076094,7.67204550958849,1.64925650093358,2.39356389145958,2.55734850319616,6.09439401120026,1.70215567407342,1.86846674698672,1.7587406567972,2.08593167368081,1.3031330682307,4.84319602106695,2.20966581592539,1.89877432464531,0.422510572623884,0.850417199860174,1.04829322754188,1.46027220490444,1.05123824989054,0.64290234678832,0.285012743741249,0.79566670879636,0.365328307529268,0,1.09227722252426,0,0,0,0,0.661044872784862,0,0,0.587237189370939,1.14681968437569,0,0,0.263384084775077,0.196709770113833,1.57204305099666,1.02800749499755,0.167186495390678,0.651844533267181,0,0,0.334231370655521,0.589211814949674,0.221533894583621,1.35401931882508,0.640456598628376,0.520237390239513,0.822189523018381,0,2.31842468588042,1.18629250529648,0.535081656179426,2.09071047609954,0.339928028092699,0,0.34362744548263,1.01207876807801,0.318565414324097,0,0,0.752875595388864,0.639933055772092,0,0.473554504088034,0,0.80642697289893,1.87208137048455,0.579297615531196,0,0,0,5.06014813338393,1.50401373190767,5.79386075843295,0.795285947051099,0.973269740605272,0.283604451492204,0.221729397462564,0.351339142772504,0.261958150995425,0.728590576585084,0.370784442784429,1.62273696827342,2.78607579678828,1.99436940778298,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0.825354125820202,0.208994966536811,0,0,0,0,0.760272105718513,0.24406205754817,1.47065232138347,0,0,0,0,0,0,0,0,0,0,0.496971951695318,1.77282716330412,1.19168262731897,4.30254931123221,3.90135220418193,0,0,0.74000264525148,0.311211035399766,0.134710672069688,0.326923806226917,0,1.15235184896,0,1.24864030732128,0.570471821544449,2.54062756938062,0.352303495931295,0.323745888736263,0.280901613404497,0.204154171254893,0.491337269247072,0.723280468230358,7.12801714369232,1.48360157567134,0.910161361938026,0.718618141816238,0.168336113954066,0.125118519871964,0.554128230968366,0,0.612975591598039,0.45071417671979,0,4.48474089222155,1.92201649936711,0.847727604638247,7.20218630602566,2.26715564324566,2.06112432036503,2.04728541964749,5.56961896396179,1.75386609290158,2.77677151668526,2.02509777013059,5.01102776138317,5.68015348026583,2.72030665214629,1.52604533079439,1.54608682530637,2.18196896472668,0.860413786167011,0,0.132529768321485,0,0,0,0,0,1.28648187638577,1.38134921352481,0.464367928031979,1.44375896333917,0.354920400119532,0.505754070234305,0,0,0.653638332277218,0,0.539325232640658,0.196221465125346,0,0,0,0,0,0,0,0,0,0,1.02940686179115,2.63400684980701,0,0.603173834469785,0.740707561268237,0,0,2.88662684050547,0.34779121492523,0,0,0.462985512576611,0,0.790204397959275,0,0.984868024349589,1.63802985597466,0.743155811443641,0,1.6798212819886,1.70130116690864,0.895585227028483,1.45316969256981,1.53353071666084,0.492663237895943,3.69803422855549,7.46381215946779,5.18831832301061,4.16600030307054,1.0159663086747,3.05590740446622,4.68869788840188,1.71072446022705,1.95372236136315,1.20137223137567,2.5724378936752,0.336393253036082,0,0.4400297149257,0.517086863031111,0,0,1.32969058292435,1.04007436911366,0,0,0.266422179016099,0.714889968290738,0,0,0.325736184293735,0,0,0.904318131178758,0,1.19967589418468,2.43247561282381,0.502257091432126,8.43335757932127,1.19812427745791,0,0,1.73737568001095,1.2328579353023,0.179060963239896,0.560425719967636,0.591092280605782,0.215627574859517,0.898401253958239,8.89331184778622,0,1.54657762555539,0.502548796003046,0,0.749007023947182,2.99161459204025,0.828831026872071,0.36807447515742,0.500170521059677,0.271265023699736,1.45579603071565,2.49800584316026,1.57702415033935,0.468565659970853,0.902838299183157,0,0,1.32845119707087,0.184369168541703,4.17041349446798,0,0,0.413536052245775,0.647142602455851,0.426910231213777,0,0,0,2.23297027036899,0.61384789315225,1.12264037773229,0.768834895534206,0,1.28683136914886,1.48418066444991,2.15893571323718,1.77561725313127,2.21743321237285,3.11552657510173,1.97557643381931,0.241718899183244,4.0101294060657,0.552485933615378,2.98517565227978,1.45672934405374,4.19598127870157,0,0.770153371044148,0,0,0.949964660035881,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0,0,0,0.256450125116389,0.656029291399411,0,1.03041011647722,0,0,0,0.650060246036521,0,3.48014585851639,0.4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| ||
|short_description=p@chr11:35252601..35252624,+ | |short_description=p@chr11:35252601..35252624,+ | ||
}} | }} |
Latest revision as of 21:54, 23 July 2015
Short description: | p@chr11:35252601..35252624, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:35252601..35252624, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 4.16e-17 | 66 |
granulocyte monocyte progenitor cell | 1.22e-16 | 67 |
defensive cell | 3.20e-16 | 48 |
phagocyte | 3.20e-16 | 48 |
classical monocyte | 7.83e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.83e-16 | 42 |
myeloid leukocyte | 1.39e-15 | 72 |
monopoietic cell | 2.24e-15 | 59 |
monocyte | 2.24e-15 | 59 |
monoblast | 2.24e-15 | 59 |
promonocyte | 2.24e-15 | 59 |
macrophage dendritic cell progenitor | 1.85e-14 | 61 |
multi fate stem cell | 8.02e-11 | 427 |
motile cell | 9.08e-11 | 386 |
somatic stem cell | 1.23e-10 | 433 |
stem cell | 8.71e-10 | 441 |
mesenchymal cell | 3.04e-09 | 354 |
connective tissue cell | 7.72e-09 | 361 |
skin fibroblast | 1.49e-08 | 23 |
fibroblast | 8.09e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.03e-13 | 76 |
bone element | 1.02e-11 | 82 |
musculoskeletal system | 1.13e-11 | 167 |
skeletal element | 1.63e-11 | 90 |
skeletal system | 1.37e-10 | 100 |
immune system | 1.74e-09 | 93 |
hematopoietic system | 5.79e-09 | 98 |
blood island | 5.79e-09 | 98 |
integument | 1.09e-08 | 46 |
integumental system | 1.09e-08 | 46 |
connective tissue | 3.95e-08 | 371 |
hemolymphoid system | 1.50e-07 | 108 |
skin of body | 5.04e-07 | 41 |