FFCP PHASE1:Hg19::chr11:35250931..35250946,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:35250931..35250946,+ | |||
|coexpression_cluster_id=C2128 | |||
|description=CAGE_peak_at_chr11:35250931..35250946,+ | |description=CAGE_peak_at_chr11:35250931..35250946,+ | ||
|id=chr11:35250931..35250946,+ | |id=chr11:35250931..35250946,+ | ||
|ontology_enrichment_celltype=CL:0002371!3.11e-16!591;CL:0002057!1.94e-15!42;CL:0000144!9.14e-15!625;CL:0000839!9.87e-15!70;CL:0000557!1.34e-14!71;CL:0000860!1.88e-14!45;CL:0000766!4.37e-14!76;CL:0002194!5.15e-14!63;CL:0000576!5.15e-14!63;CL:0000040!5.15e-14!63;CL:0000559!5.15e-14!63;CL:0002009!1.09e-13!65;CL:0000548!5.92e-13!679;CL:0000004!5.92e-13!679;CL:0000255!5.92e-13!679;CL:0000003!2.06e-12!722;CL:0000012!2.26e-12!682;CL:0000723!2.34e-11!436;CL:0000048!4.81e-11!430;CL:0002320!1.68e-10!365;CL:0000219!3.25e-10!390;CL:0000034!8.73e-10!444;CL:0000134!9.15e-10!358;CL:0000055!4.49e-08!180;CL:0000063!5.53e-08!578;CL:0002031!6.50e-07!124;CL:0000763!7.62e-07!112;CL:0000049!7.62e-07!112 | |ontology_enrichment_celltype=CL:0002371!3.11e-16!591;CL:0002057!1.94e-15!42;CL:0000144!9.14e-15!625;CL:0000839!9.87e-15!70;CL:0000557!1.34e-14!71;CL:0000860!1.88e-14!45;CL:0000766!4.37e-14!76;CL:0002194!5.15e-14!63;CL:0000576!5.15e-14!63;CL:0000040!5.15e-14!63;CL:0000559!5.15e-14!63;CL:0002009!1.09e-13!65;CL:0000548!5.92e-13!679;CL:0000004!5.92e-13!679;CL:0000255!5.92e-13!679;CL:0000003!2.06e-12!722;CL:0000012!2.26e-12!682;CL:0000723!2.34e-11!436;CL:0000048!4.81e-11!430;CL:0002320!1.68e-10!365;CL:0000219!3.25e-10!390;CL:0000034!8.73e-10!444;CL:0000134!9.15e-10!358;CL:0000055!4.49e-08!180;CL:0000063!5.53e-08!578;CL:0002031!6.50e-07!124;CL:0000763!7.62e-07!112;CL:0000049!7.62e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.28e-21;33!CL:0002057;1.28e-21;33!CL:0000473;6.13e-18;39!CL:0000234;6.13e-18;39!CL:0000576;1.05e-09;48!CL:0000766;5.66e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,7.90e-19,67;CL:0000473,1.29e-18,48;CL:0000234,1.29e-18,48;CL:0000839,2.55e-18,66;CL:0000860,5.68e-18,42;CL:0002057,5.68e-18,42;CL:0002194,1.48e-17,59;CL:0000576,1.48e-17,59;CL:0000040,1.48e-17,59;CL:0000559,1.48e-17,59;CL:0002009,1.68e-17,61;CL:0000766,3.63e-17,72;CL:0000723,3.41e-12,433;CL:0000048,1.53e-11,427;CL:0000219,2.80e-11,386;CL:0000034,3.85e-11,441;CL:0002320,1.05e-10,361;CL:0000134,2.25e-10,354;CL:0002031,1.48e-08,120;CL:0000763,6.12e-08,108;CL:0000049,6.12e-08,108;CL:0000738,3.34e-07,136;CL:0002087,3.42e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;2.71e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.69e-15!80;UBERON:0002204!2.60e-14!167;UBERON:0001474!1.02e-12!86;UBERON:0004765!1.31e-12!101;UBERON:0001434!1.31e-12!101;UBERON:0002384!1.21e-09!375;UBERON:0002390!1.64e-09!102;UBERON:0003061!1.64e-09!102;UBERON:0002193!4.83e-08!112;UBERON:0003102!5.93e-08!95;UBERON:0002199!3.86e-07!45;UBERON:0002416!3.86e-07!45 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.16e-19,76;UBERON:0004765,6.77e-18,90;UBERON:0001474,3.56e-17,82;UBERON:0002204,1.80e-16,167;UBERON:0001434,1.93e-16,100;UBERON:0002405,5.87e-13,93;UBERON:0002390,9.28e-11,98;UBERON:0003061,9.28e-11,98;UBERON:0002384,8.99e-10,371;UBERON:0002199,3.41e-09,46;UBERON:0002416,3.41e-09,46;UBERON:0002193,7.84e-09,108;UBERON:0002097,3.50e-07,41 | |||
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| ||
|short_description=p@chr11:35250931..35250946,+ | |short_description=p@chr11:35250931..35250946,+ | ||
}} | }} |
Latest revision as of 21:53, 23 July 2015
Short description: | p@chr11:35250931..35250946, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:35250931..35250946, + |
Coexpression cluster: | C2128_normal_CD14_leiomyoma_Fibroblast_signet_tenocyte_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 7.90e-19 | 67 |
defensive cell | 1.29e-18 | 48 |
phagocyte | 1.29e-18 | 48 |
myeloid lineage restricted progenitor cell | 2.55e-18 | 66 |
classical monocyte | 5.68e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.68e-18 | 42 |
monopoietic cell | 1.48e-17 | 59 |
monocyte | 1.48e-17 | 59 |
monoblast | 1.48e-17 | 59 |
promonocyte | 1.48e-17 | 59 |
macrophage dendritic cell progenitor | 1.68e-17 | 61 |
myeloid leukocyte | 3.63e-17 | 72 |
somatic stem cell | 3.41e-12 | 433 |
multi fate stem cell | 1.53e-11 | 427 |
motile cell | 2.80e-11 | 386 |
stem cell | 3.85e-11 | 441 |
connective tissue cell | 1.05e-10 | 361 |
mesenchymal cell | 2.25e-10 | 354 |
hematopoietic lineage restricted progenitor cell | 1.48e-08 | 120 |
myeloid cell | 6.12e-08 | 108 |
common myeloid progenitor | 6.12e-08 | 108 |
leukocyte | 3.34e-07 | 136 |
nongranular leukocyte | 3.42e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.16e-19 | 76 |
skeletal element | 6.77e-18 | 90 |
bone element | 3.56e-17 | 82 |
musculoskeletal system | 1.80e-16 | 167 |
skeletal system | 1.93e-16 | 100 |
immune system | 5.87e-13 | 93 |
hematopoietic system | 9.28e-11 | 98 |
blood island | 9.28e-11 | 98 |
connective tissue | 8.99e-10 | 371 |
integument | 3.41e-09 | 46 |
integumental system | 3.41e-09 | 46 |
hemolymphoid system | 7.84e-09 | 108 |
skin of body | 3.50e-07 | 41 |