FFCP PHASE1:Hg19::chr11:28723970..28723983,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-178bp_to_ENST00000513853_5end | |association_with_transcript=-178bp_to_ENST00000513853_5end | ||
|cluster_id=chr11:28723970..28723983,+ | |||
|coexpression_cluster_id=C341 | |||
|description=CAGE_peak_3_at_ENST00000513853_5end | |description=CAGE_peak_3_at_ENST00000513853_5end | ||
|id=chr11:28723970..28723983,+ | |id=chr11:28723970..28723983,+ | ||
|ontology_enrichment_celltype=CL:0000066!7.11e-10!254;CL:0000077!9.39e-08!19 | |ontology_enrichment_celltype=CL:0000066!7.11e-10!254;CL:0000077!9.39e-08!19 | ||
|ontology_enrichment_celltype_v019=CL:0000222;1.72e-14;1!CL:0000047;6.80e-08;2!CL:0000054;6.80e-08;2!CL:0000137;6.80e-08;2!CL:0000092;6.80e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,5.02e-08,2;CL:0000137,5.02e-08,2;CL:0000092,5.02e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.54e-13!235;DOID:14566!7.58e-13!239;DOID:0050687!2.13e-11!143;DOID:305!4.46e-11!106;DOID:7!8.93e-07!39 | |ontology_enrichment_disease=DOID:162!2.54e-13!235;DOID:14566!7.58e-13!239;DOID:0050687!2.13e-11!143;DOID:305!4.46e-11!106;DOID:7!8.93e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:4556;4.62e-19;3!DOID:3112;6.21e-15;1!DOID:0060085;1.72e-14;1!DOID:3165;1.72e-14;1!DOID:0060121;1.72e-14;1!DOID:2438;1.72e-14;1!DOID:4418;1.72e-14;1!DOID:3908;7.88e-12;5!DOID:200;6.80e-08;2!DOID:4305;6.80e-08;2!DOID:3905;5.86e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,4.62e-19,3;DOID:3112,6.22e-15,1;DOID:0060085,9.36e-15,1;DOID:3165,9.36e-15,1;DOID:0060121,9.36e-15,1;DOID:2438,9.36e-15,1;DOID:4418,9.36e-15,1;DOID:3908,7.88e-12,5;DOID:200,5.02e-08,2;DOID:4305,5.02e-08,2;DOID:3905,5.86e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0002394!4.77e-08!4;UBERON:0003928!4.77e-08!4;UBERON:0002294!6.55e-08!7;UBERON:0001173!6.55e-08!7;UBERON:0004912!6.55e-08!7;UBERON:0002046!8.91e-07!5;UBERON:0004117!8.91e-07!5;UBERON:0007689!8.91e-07!5;UBERON:0007123!8.91e-07!5;UBERON:0003091!8.91e-07!5 | |ontology_enrichment_uberon=UBERON:0002394!4.77e-08!4;UBERON:0003928!4.77e-08!4;UBERON:0002294!6.55e-08!7;UBERON:0001173!6.55e-08!7;UBERON:0004912!6.55e-08!7;UBERON:0002046!8.91e-07!5;UBERON:0004117!8.91e-07!5;UBERON:0007689!8.91e-07!5;UBERON:0007123!8.91e-07!5;UBERON:0003091!8.91e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;1.72e-14;1!UBERON:0009842;1.72e-14;1!UBERON:0003704;1.72e-14;1!UBERON:0001171;1.72e-14;1!UBERON:0001172;1.72e-14;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.41e-14,1;UBERON:0009842,1.41e-14,1;UBERON:0003704,1.41e-14,1;UBERON:0001171,1.41e-14,1;UBERON:0001172,1.41e-14,1 | |||
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| ||
|short_description=p3@ENST00000513853 | |short_description=p3@ENST00000513853 | ||
}} | }} |
Latest revision as of 21:20, 23 July 2015
Short description: | p3@ENST00000513853 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000513853_5end |
Coexpression cluster: | C341_giant_large_Fibroblast_Mesenchymal_Alveolar_Mesothelial_mesothelioma |
Association with transcript: | -178bp_to_ENST00000513853_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 5.02e-08 | 2 |
osteocyte | 5.02e-08 | 2 |
osteoclast | 5.02e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.41e-14 | 1 |
acinus | 1.41e-14 | 1 |
intrahepatic bile duct | 1.41e-14 | 1 |
portal lobule | 1.41e-14 | 1 |
hepatic acinus | 1.41e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 4.62e-19 | 3 |
papillary adenocarcinoma | 6.22e-15 | 1 |
organ system benign neoplasm | 9.36e-15 | 1 |
skin benign neoplasm | 9.36e-15 | 1 |
integumentary system benign neoplasm | 9.36e-15 | 1 |
dermis tumor | 9.36e-15 | 1 |
cutaneous fibrous histiocytoma | 9.36e-15 | 1 |
non-small cell lung carcinoma | 7.88e-12 | 5 |
giant cell tumor | 5.02e-08 | 2 |
bone giant cell tumor | 5.02e-08 | 2 |
lung carcinoma | 5.86e-07 | 9 |