FFCP PHASE1:Hg19::chr11:2154095..2154106,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:2154095..2154106,- | |||
|coexpression_cluster_id=C172 | |coexpression_cluster_id=C172 | ||
|description=CAGE_peak_at_chr11:2154095..2154106,- | |description=CAGE_peak_at_chr11:2154095..2154106,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;4.79e-12;19 | |ontology_enrichment_celltype_v019=CL:0000349;4.79e-12;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.04e-12,19 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!3.74e-14!347;UBERON:0007023!3.79e-14!115;UBERON:0000475!1.08e-11!365;UBERON:0000468!1.18e-11!659;UBERON:0000119!2.00e-11!312;UBERON:0005631!3.82e-11!14;UBERON:0000158!3.82e-11!14;UBERON:0000483!8.87e-11!309;UBERON:0004119!1.19e-10!169;UBERON:0000925!1.19e-10!169;UBERON:0006595!1.19e-10!169;UBERON:0000922!1.23e-09!612;UBERON:0000062!2.09e-09!511;UBERON:0000064!3.31e-09!219;UBERON:0002616!5.76e-09!59;UBERON:0000477!1.26e-08!286;UBERON:0001049!2.46e-08!57;UBERON:0005068!2.46e-08!57;UBERON:0006241!2.46e-08!57;UBERON:0007135!2.46e-08!57;UBERON:0000478!4.64e-08!24;UBERON:0002050!5.53e-08!605;UBERON:0005423!5.53e-08!605;UBERON:0003075!7.11e-08!86;UBERON:0007284!7.11e-08!86;UBERON:0000923!1.13e-07!604;UBERON:0005291!1.13e-07!604;UBERON:0006598!1.13e-07!604;UBERON:0002532!1.13e-07!604;UBERON:0001007!1.45e-07!155;UBERON:0001555!1.45e-07!155;UBERON:0007026!1.45e-07!155;UBERON:0002346!1.61e-07!90;UBERON:0000955!1.74e-07!69;UBERON:0006238!1.74e-07!69;UBERON:0004921!1.79e-07!129;UBERON:0004185!1.79e-07!129;UBERON:0000467!3.02e-07!625;UBERON:0000480!3.98e-07!626;UBERON:0002100!5.03e-07!216;UBERON:0004111!5.05e-07!241;UBERON:0002107!7.24e-07!19;UBERON:0006925!7.24e-07!19;UBERON:0008836!7.24e-07!19;UBERON:0001017!8.07e-07!82;UBERON:0000153!8.87e-07!129;UBERON:0007811!8.87e-07!129 | |ontology_enrichment_uberon=UBERON:0000481!3.74e-14!347;UBERON:0007023!3.79e-14!115;UBERON:0000475!1.08e-11!365;UBERON:0000468!1.18e-11!659;UBERON:0000119!2.00e-11!312;UBERON:0005631!3.82e-11!14;UBERON:0000158!3.82e-11!14;UBERON:0000483!8.87e-11!309;UBERON:0004119!1.19e-10!169;UBERON:0000925!1.19e-10!169;UBERON:0006595!1.19e-10!169;UBERON:0000922!1.23e-09!612;UBERON:0000062!2.09e-09!511;UBERON:0000064!3.31e-09!219;UBERON:0002616!5.76e-09!59;UBERON:0000477!1.26e-08!286;UBERON:0001049!2.46e-08!57;UBERON:0005068!2.46e-08!57;UBERON:0006241!2.46e-08!57;UBERON:0007135!2.46e-08!57;UBERON:0000478!4.64e-08!24;UBERON:0002050!5.53e-08!605;UBERON:0005423!5.53e-08!605;UBERON:0003075!7.11e-08!86;UBERON:0007284!7.11e-08!86;UBERON:0000923!1.13e-07!604;UBERON:0005291!1.13e-07!604;UBERON:0006598!1.13e-07!604;UBERON:0002532!1.13e-07!604;UBERON:0001007!1.45e-07!155;UBERON:0001555!1.45e-07!155;UBERON:0007026!1.45e-07!155;UBERON:0002346!1.61e-07!90;UBERON:0000955!1.74e-07!69;UBERON:0006238!1.74e-07!69;UBERON:0004921!1.79e-07!129;UBERON:0004185!1.79e-07!129;UBERON:0000467!3.02e-07!625;UBERON:0000480!3.98e-07!626;UBERON:0002100!5.03e-07!216;UBERON:0004111!5.05e-07!241;UBERON:0002107!7.24e-07!19;UBERON:0006925!7.24e-07!19;UBERON:0008836!7.24e-07!19;UBERON:0001017!8.07e-07!82;UBERON:0000153!8.87e-07!129;UBERON:0007811!8.87e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.96e-11;24!UBERON:0005631;1.24e-10;10!UBERON:0000158;1.24e-10;10!UBERON:0002107;1.62e-08;19!UBERON:0006925;1.62e-08;19!UBERON:0000305;8.85e-08;7!UBERON:0000922;2.74e-07;49!UBERON:0002368;7.38e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0000478;1.96e-11;24!UBERON:0005631;1.24e-10;10!UBERON:0000158;1.24e-10;10!UBERON:0002107;1.62e-08;19!UBERON:0006925;1.62e-08;19!UBERON:0000305;8.85e-08;7!UBERON:0000922;2.74e-07;49!UBERON:0002368;7.38e-07;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.64e-14,14;UBERON:0000158,2.64e-14,14;UBERON:0000478,2.05e-11,24;UBERON:0003104,2.50e-10,160;UBERON:0009142,2.50e-10,160;UBERON:0004119,5.55e-10,160;UBERON:0000925,5.55e-10,160;UBERON:0006595,5.55e-10,160;UBERON:0002107,1.55e-08,19;UBERON:0006925,1.55e-08,19;UBERON:0008836,1.55e-08,19;UBERON:0003124,3.36e-08,7;UBERON:0000305,9.97e-08,7;UBERON:0005256,1.05e-07,122;UBERON:0011216,1.43e-07,223;UBERON:0007499,3.88e-07,25;UBERON:0001008,6.74e-07,48;UBERON:0004921,7.71e-07,118;UBERON:0008835,9.04e-07,22;UBERON:0003894,9.04e-07,22 | |||
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| ||
|short_description=p@chr11:2154095..2154106,- | |short_description=p@chr11:2154095..2154106,- | ||
}} | }} |
Latest revision as of 21:01, 23 July 2015
Short description: | p@chr11:2154095..2154106, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:2154095..2154106, - |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.04e-12 | 19 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.64e-14 | 14 |
membranous layer | 2.64e-14 | 14 |
extraembryonic structure | 2.05e-11 | 24 |
mesenchyme | 2.50e-10 | 160 |
entire embryonic mesenchyme | 2.50e-10 | 160 |
endoderm-derived structure | 5.55e-10 | 160 |
endoderm | 5.55e-10 | 160 |
presumptive endoderm | 5.55e-10 | 160 |
liver | 1.55e-08 | 19 |
digestive gland | 1.55e-08 | 19 |
liver bud | 1.55e-08 | 19 |
chorion | 3.36e-08 | 7 |
amnion | 9.97e-08 | 7 |
trunk mesenchyme | 1.05e-07 | 122 |
organ system subdivision | 1.43e-07 | 223 |
epithelial sac | 3.88e-07 | 25 |
renal system | 6.74e-07 | 48 |
subdivision of digestive tract | 7.71e-07 | 118 |
hepatic diverticulum | 9.04e-07 | 22 |
liver primordium | 9.04e-07 | 22 |