FFCP PHASE1:Hg19::chr11:2008416..2008424,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:2008416..2008424,- | |||
|coexpression_cluster_id=C106 | |coexpression_cluster_id=C106 | ||
|description=CAGE_peak_at_chr11:2008416..2008424,- | |description=CAGE_peak_at_chr11:2008416..2008424,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002150!1.20e-18!3;CL:0000861!1.20e-18!3 | |ontology_enrichment_celltype=CL:0002150!1.20e-18!3;CL:0000861!1.20e-18!3 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.53e-34;29!UBERON:0006595;1.53e-07;86 | |ontology_enrichment_development_v019=UBERON:0008947;1.53e-34;29!UBERON:0006595;1.53e-07;86 | ||
|ontology_enrichment_disease=DOID:305!4.94e-15!106;DOID:0050687!3.52e-10!143 | |ontology_enrichment_disease=DOID:305!4.94e-15!106;DOID:0050687!3.52e-10!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,5.66e-10,106;DOID:0050687,1.55e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.74e-44!9;UBERON:0001557!1.52e-25!19;UBERON:0000077!4.88e-13!130;UBERON:0001041!9.04e-13!98;UBERON:0004921!1.52e-11!129;UBERON:0004185!1.52e-11!129;UBERON:0000072!1.15e-09!46;UBERON:0008947!1.29e-09!38;UBERON:0003258!1.29e-09!38;UBERON:0004119!4.72e-09!169;UBERON:0000925!4.72e-09!169;UBERON:0006595!4.72e-09!169;UBERON:0001007!5.24e-09!155;UBERON:0001555!5.24e-09!155;UBERON:0007026!5.24e-09!155;UBERON:0000065!3.42e-08!53;UBERON:0005631!3.70e-07!14;UBERON:0000158!3.70e-07!14;UBERON:0003104!5.53e-07!238;UBERON:0009142!5.53e-07!238 | |ontology_enrichment_uberon=UBERON:0001737!1.74e-44!9;UBERON:0001557!1.52e-25!19;UBERON:0000077!4.88e-13!130;UBERON:0001041!9.04e-13!98;UBERON:0004921!1.52e-11!129;UBERON:0004185!1.52e-11!129;UBERON:0000072!1.15e-09!46;UBERON:0008947!1.29e-09!38;UBERON:0003258!1.29e-09!38;UBERON:0004119!4.72e-09!169;UBERON:0000925!4.72e-09!169;UBERON:0006595!4.72e-09!169;UBERON:0001007!5.24e-09!155;UBERON:0001555!5.24e-09!155;UBERON:0007026!5.24e-09!155;UBERON:0000065!3.42e-08!53;UBERON:0005631!3.70e-07!14;UBERON:0000158!3.70e-07!14;UBERON:0003104!5.53e-07!238;UBERON:0009142!5.53e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.59e-109;9!UBERON:0001557;4.59e-109;9!UBERON:0000065;5.83e-24;44!UBERON:0000072;1.07e-23;37!UBERON:0001004;1.18e-14;65 | |ontology_enrichment_uberon_v019=UBERON:0001737;4.59e-109;9!UBERON:0001557;4.59e-109;9!UBERON:0000065;5.83e-24;44!UBERON:0000072;1.07e-23;37!UBERON:0001004;1.18e-14;65 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.60e-109,9;UBERON:0001557,3.17e-52,19;UBERON:0008947,1.44e-26,38;UBERON:0003258,1.44e-26,38;UBERON:0000072,1.23e-21,47;UBERON:0000065,6.22e-19,54;UBERON:0001004,5.20e-14,74;UBERON:0001041,5.13e-12,87;UBERON:0004921,6.01e-09,118;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0001048,8.66e-07,160;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160 | |||
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|short_description=p@chr11:2008416..2008424,- | |short_description=p@chr11:2008416..2008424,- | ||
}} | }} |
Latest revision as of 20:53, 23 July 2015
Short description: | p@chr11:2008416..2008424, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:2008416..2008424, - |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 4.60e-109 | 9 |
upper respiratory tract | 3.17e-52 | 19 |
respiratory primordium | 1.44e-26 | 38 |
endoderm of foregut | 1.44e-26 | 38 |
segment of respiratory tract | 1.23e-21 | 47 |
respiratory tract | 6.22e-19 | 54 |
respiratory system | 5.20e-14 | 74 |
foregut | 5.13e-12 | 87 |
subdivision of digestive tract | 6.01e-09 | 118 |
digestive system | 2.16e-07 | 145 |
digestive tract | 2.16e-07 | 145 |
primitive gut | 2.16e-07 | 145 |
primordium | 8.66e-07 | 160 |
endoderm-derived structure | 9.48e-07 | 160 |
endoderm | 9.48e-07 | 160 |
presumptive endoderm | 9.48e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.66e-10 | 106 |
cell type cancer | 1.55e-07 | 143 |