FFCP PHASE1:Hg19::chr11:19619742..19619759,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:19619742..19619759,+ | |||
|coexpression_cluster_id=C1107 | |||
|description=CAGE_peak_at_chr11:19619742..19619759,+ | |||
|id=chr11:19619742..19619759,+ | |||
|ontology_enrichment_celltype=CL:0000188!6.20e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000515;3.78e-30;3!CL:0000056;8.73e-23;4!CL:0000680;2.80e-13;7!CL:0000222;3.76e-11;1!CL:0002174;4.80e-11;1!CL:0000501;4.80e-11;1!CL:0002321;1.00e-10;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,8.74e-23,4;CL:0002174,5.05e-11,1;CL:0000501,5.05e-11,1;CL:0000680,1.39e-09,58;CL:0000056,1.39e-09,58;CL:0000355,1.39e-09,58 | |||
|ontology_enrichment_development_v019=CL:0000515;8.73e-23;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!5.74e-22!86;UBERON:0007284!5.74e-22!86;UBERON:0000033!1.51e-21!123;UBERON:0000153!4.53e-21!129;UBERON:0007811!4.53e-21!129;UBERON:0002346!1.64e-20!90;UBERON:0001049!1.83e-20!57;UBERON:0005068!1.83e-20!57;UBERON:0006241!1.83e-20!57;UBERON:0007135!1.83e-20!57;UBERON:0005743!1.94e-20!86;UBERON:0001017!6.19e-19!82;UBERON:0000073!1.18e-18!94;UBERON:0001016!1.18e-18!94;UBERON:0003056!1.29e-18!61;UBERON:0002616!7.73e-18!59;UBERON:0000955!8.72e-18!69;UBERON:0006238!8.72e-18!69;UBERON:0002308!2.54e-17!9;UBERON:0000125!2.54e-17!9;UBERON:0002420!2.80e-17!9;UBERON:0007245!2.80e-17!9;UBERON:0010009!2.80e-17!9;UBERON:0010011!2.80e-17!9;UBERON:0000454!2.80e-17!9;UBERON:0002020!2.45e-15!34;UBERON:0003528!2.45e-15!34;UBERON:0001893!4.35e-15!34;UBERON:0002780!6.77e-15!41;UBERON:0001890!6.77e-15!41;UBERON:0006240!6.77e-15!41;UBERON:0004121!9.03e-15!169;UBERON:0003080!2.06e-14!42;UBERON:0000924!3.93e-14!173;UBERON:0006601!3.93e-14!173;UBERON:0009663!4.49e-14!7;UBERON:0002791!5.79e-14!33;UBERON:0001869!9.08e-13!32;UBERON:0007023!1.10e-12!115;UBERON:0000475!2.48e-12!365;UBERON:0000064!7.06e-09!219;UBERON:0000369!2.38e-08!4;UBERON:0002435!2.38e-08!4;UBERON:0000204!2.38e-08!4;UBERON:0010082!2.38e-08!4;UBERON:0002298!2.98e-08!8;UBERON:0000119!4.53e-08!312;UBERON:0000483!7.96e-08!309;UBERON:0003076!2.25e-07!15;UBERON:0003057!2.25e-07!15;UBERON:0000481!2.41e-07!347;UBERON:0005383!6.35e-07!3;UBERON:0005382!6.35e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;4.01e-21;16!UBERON:0002036;4.01e-21;16!UBERON:0001875;7.55e-20;2!UBERON:0006514;7.55e-20;2!UBERON:0009663;7.31e-13;7!UBERON:0002385;1.93e-10;31!UBERON:0001015;1.93e-10;31!UBERON:0000383;1.93e-10;31!UBERON:0002420;3.99e-10;9!UBERON:0000125;3.99e-10;9!UBERON:0007245;3.99e-10;9!UBERON:0002308;3.99e-10;9!UBERON:0010009;3.99e-10;9!UBERON:0010011;3.99e-10;9!UBERON:0000454;3.99e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001875,7.92e-20,2;UBERON:0006514,7.92e-20,2;UBERON:0009663,7.46e-13,7;UBERON:0001134,3.20e-11,62;UBERON:0002036,3.20e-11,62;UBERON:0003082,3.20e-11,62;UBERON:0002385,7.84e-11,64;UBERON:0001015,7.84e-11,64;UBERON:0000383,7.84e-11,64;UBERON:0002420,4.06e-10,9;UBERON:0000125,4.06e-10,9;UBERON:0007245,4.06e-10,9;UBERON:0002308,4.06e-10,9;UBERON:0010009,4.06e-10,9;UBERON:0010011,4.06e-10,9;UBERON:0000454,4.06e-10,9;UBERON:0002329,1.21e-09,71;UBERON:0003059,1.21e-09,71;UBERON:0007282,1.21e-09,71;UBERON:0004290,1.21e-09,71;UBERON:0009618,1.21e-09,71;UBERON:0003077,1.72e-09,72;UBERON:0007285,1.72e-09,72;UBERON:0007524,2.41e-09,73;UBERON:0007503,1.15e-08,78;UBERON:0000486,4.54e-08,83 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.263504357079378,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368502951935304,0.309977343527296,0,0,0,0,0.505008341862199,0.250237039743928,1.10825646193673,0,0,0,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.977424915930974,0,0,0.927443239800615,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.98991016006297,14.5888189010772,23.6360471476662,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0,0.431831832204279,0,0,0,0,0,0.447749509444357,0,0,0,2.95213181129735,0,0,0,0,0,0,0,1.25671933779759,0.308097234229289,0.460511024178389,1.10269257987624,0,0,0.93749290157711,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0.429374660225974,0,2.21465597303108,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,3.17020642346017,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0,0,0,0,0.75894634753143,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0.796991953004279,0,0,1.1249555075237,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,4.42870692906919,0.241192877250816,1.52581736317083,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209205692624666,0,0,1.20084057741958,2.46429682005587,0,3.0083580899397,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0,0.3755727921195,0,0.110929051536852,0.931446044120752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,24.8017214091155,0,0,5.04739592914604,0,0,0.260994291965212,0,0,0,0.179088841081487,0,0.219284049578707,0.176689145945881,0,0,0,0,0.911579868532147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.478901577171454,0,0,0,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.507326481551255,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.203909198930495,0.131545547125698,0,0,0,0.471346769748006,0,0,0.215927591218621,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0,0,0,0,0.33883824611688,0,0,0,0,0,0,0,1.76677620403451,0.891139200981258,0,0,0,0,0,0,0,0,0,0,0.716697915757256,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.413731983447581,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr11:19619742..19619759,+ | |||
}} |
Latest revision as of 20:50, 23 July 2015
Short description: | p@chr11:19619742..19619759, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:19619742..19619759, + |
Coexpression cluster: | C1107_Myoblast_mesenchymal_skeletal_diaphragm_tongue_Prostate_penis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 8.74e-23 | 4 |
follicular cell of ovary | 5.05e-11 | 1 |
granulosa cell | 5.05e-11 | 1 |
muscle precursor cell | 1.39e-09 | 58 |
myoblast | 1.39e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.39e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
globus pallidus | 7.92e-20 | 2 |
pallidum | 7.92e-20 | 2 |
telencephalic nucleus | 7.46e-13 | 7 |
skeletal muscle tissue | 3.20e-11 | 62 |
striated muscle tissue | 3.20e-11 | 62 |
myotome | 3.20e-11 | 62 |
muscle tissue | 7.84e-11 | 64 |
musculature | 7.84e-11 | 64 |
musculature of body | 7.84e-11 | 64 |
basal ganglion | 4.06e-10 | 9 |
neural nucleus | 4.06e-10 | 9 |
nuclear complex of neuraxis | 4.06e-10 | 9 |
nucleus of brain | 4.06e-10 | 9 |
aggregate regional part of brain | 4.06e-10 | 9 |
collection of basal ganglia | 4.06e-10 | 9 |
cerebral subcortex | 4.06e-10 | 9 |
somite | 1.21e-09 | 71 |
presomitic mesoderm | 1.21e-09 | 71 |
presumptive segmental plate | 1.21e-09 | 71 |
dermomyotome | 1.21e-09 | 71 |
trunk paraxial mesoderm | 1.21e-09 | 71 |
paraxial mesoderm | 1.72e-09 | 72 |
presumptive paraxial mesoderm | 1.72e-09 | 72 |
dense mesenchyme tissue | 2.41e-09 | 73 |
epithelial vesicle | 1.15e-08 | 78 |
multilaminar epithelium | 4.54e-08 | 83 |