FFCP PHASE1:Hg19::chr11:1580443..1580467,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:1580443..1580467,- | |||
|description=CAGE_peak_at_chr11:1580443..1580467,- | |description=CAGE_peak_at_chr11:1580443..1580467,- | ||
|id=chr11:1580443..1580467,- | |id=chr11:1580443..1580467,- | ||
|ontology_enrichment_celltype=CL:0000066!1.56e-22!254;CL:1000507!9.76e-09!12;CL:1000494!9.76e-09!12;CL:0000077!1.36e-08!19;CL:1000497!9.01e-08!18;CL:0002518!9.01e-08!18;CL:1000449!2.08e-07!16 | |ontology_enrichment_celltype=CL:0000066!1.56e-22!254;CL:1000507!9.76e-09!12;CL:1000494!9.76e-09!12;CL:0000077!1.36e-08!19;CL:1000497!9.01e-08!18;CL:0002518!9.01e-08!18;CL:1000449!2.08e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000077;4.70e-10;19!CL:1000497;9.74e-07;17!CL:0002518;9.74e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.21e-16,253;CL:0000077,4.54e-10,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.64e-12;29 | |||
|ontology_enrichment_disease=DOID:305!5.26e-27!106;DOID:0050687!1.43e-16!143;DOID:162!7.32e-10!235;DOID:14566!3.10e-09!239;DOID:299!1.05e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:305;1.36e-08;106!DOID:299;1.52e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.44e-25,106;DOID:0050687,3.84e-19,143;DOID:162,1.98e-16,235;DOID:14566,7.09e-16,239;DOID:299,1.57e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0001737!6.52e-12!9;UBERON:0004119!3.01e-11!169;UBERON:0000925!3.01e-11!169;UBERON:0006595!3.01e-11!169;UBERON:0000065!4.45e-11!53;UBERON:0008947!6.67e-11!38;UBERON:0003258!6.67e-11!38;UBERON:0001007!8.50e-11!155;UBERON:0001555!8.50e-11!155;UBERON:0007026!8.50e-11!155;UBERON:0004921!1.20e-09!129;UBERON:0004185!1.20e-09!129;UBERON:0001004!2.80e-09!72;UBERON:0000058!5.09e-09!26;UBERON:0009773!9.76e-09!12;UBERON:0001231!9.76e-09!12;UBERON:0004810!9.76e-09!12;UBERON:0003064!2.23e-08!37;UBERON:0000077!2.39e-08!130;UBERON:0000466!3.61e-08!126;UBERON:0005911!4.60e-08!82;UBERON:0001557!5.53e-08!19;UBERON:0006555!6.02e-08!17;UBERON:0005103!6.02e-08!17;UBERON:0000083!6.02e-08!17;UBERON:0009201!6.02e-08!17;UBERON:0004819!6.02e-08!17;UBERON:0006553!6.02e-08!17;UBERON:0003074!6.02e-08!17;UBERON:0003060!6.02e-08!17;UBERON:0005177!6.41e-08!107;UBERON:0001041!1.00e-07!98;UBERON:0000481!1.04e-07!347;UBERON:0000072!1.08e-07!46;UBERON:0002294!1.50e-07!7;UBERON:0001173!1.50e-07!7;UBERON:0004912!1.50e-07!7;UBERON:0004876!1.90e-07!20;UBERON:0004211!2.08e-07!16;UBERON:0001285!2.08e-07!16;UBERON:0007684!2.08e-07!16;UBERON:0003220!2.08e-07!16;UBERON:0004208!2.08e-07!16;UBERON:0000489!2.48e-07!32;UBERON:0000080!2.55e-07!18;UBERON:0002120!2.55e-07!18;UBERON:0004875!2.55e-07!18;UBERON:0005721!2.55e-07!18;UBERON:0005754!2.55e-07!18;UBERON:0007297!2.55e-07!18;UBERON:0000464!3.05e-07!104;UBERON:0003104!4.63e-07!238;UBERON:0009142!4.63e-07!238;UBERON:0005172!8.40e-07!55;UBERON:0005173!8.40e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.09e-23;9!UBERON:0001557;1.09e-23;9!UBERON:0000065;3.09e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,9.04e-24,9;UBERON:0001557,1.68e-10,19;UBERON:0008947,9.01e-09,38;UBERON:0003258,9.01e-09,38 | |||
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|short_description=p@chr11:1580443..1580467,- | |short_description=p@chr11:1580443..1580467,- | ||
}} | }} |
Latest revision as of 20:21, 23 July 2015
Short description: | p@chr11:1580443..1580467, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1580443..1580467, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.21e-16 | 253 |
mesothelial cell | 4.54e-10 | 19 |
Ontology term | p-value | n |
---|---|---|
larynx | 9.04e-24 | 9 |
upper respiratory tract | 1.68e-10 | 19 |
respiratory primordium | 9.01e-09 | 38 |
endoderm of foregut | 9.01e-09 | 38 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.44e-25 | 106 |
cell type cancer | 3.84e-19 | 143 |
cancer | 1.98e-16 | 235 |
disease of cellular proliferation | 7.09e-16 | 239 |
adenocarcinoma | 1.57e-07 | 25 |