FFCP PHASE1:Hg19::chr11:134632439..134632474,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:134632439..134632474,+ | |||
|coexpression_cluster_id=C322 | |coexpression_cluster_id=C322 | ||
|description=CAGE_peak_at_chr11:134632439..134632474,+ | |description=CAGE_peak_at_chr11:134632439..134632474,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002549;9.86e-18;2!CL:0000632;2.74e-12;3!CL:0000333;5.73e-08;5 | |ontology_enrichment_celltype_v019=CL:0002549;9.86e-18;2!CL:0000632;2.74e-12;3!CL:0000333;5.73e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002549,9.07e-18,2;CL:0000632,2.31e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.22e-27;5 | |ontology_enrichment_development_v019=UBERON:0007123;2.22e-27;5 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;7.58e-07;6 | |ontology_enrichment_disease_v019=DOID:169;7.58e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:169,7.58e-07,6 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002046;2.22e-27;5!UBERON:0005629;9.86e-18;2!UBERON:0005358;9.86e-18;2!UBERON:0001886;9.86e-18;2!UBERON:0004086;9.86e-18;2!UBERON:0005282;9.86e-18;2!UBERON:0005281;9.86e-18;2!UBERON:0002368;1.30e-09;33!UBERON:0000013;5.73e-08;5!UBERON:0002410;5.73e-08;5!UBERON:0005284;6.78e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0002046;2.22e-27;5!UBERON:0005629;9.86e-18;2!UBERON:0005358;9.86e-18;2!UBERON:0001886;9.86e-18;2!UBERON:0004086;9.86e-18;2!UBERON:0005282;9.86e-18;2!UBERON:0005281;9.86e-18;2!UBERON:0002368;1.30e-09;33!UBERON:0000013;5.73e-08;5!UBERON:0002410;5.73e-08;5!UBERON:0005284;6.78e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,2.72e-27,5;UBERON:0004117,2.72e-27,5;UBERON:0007689,2.72e-27,5;UBERON:0007123,2.72e-27,5;UBERON:0003091,2.72e-27,5;UBERON:0005629,9.07e-18,2;UBERON:0005358,9.07e-18,2;UBERON:0001886,9.07e-18,2;UBERON:0004086,9.07e-18,2;UBERON:0005282,9.07e-18,2;UBERON:0005281,9.07e-18,2;UBERON:0009722,5.10e-13,11;UBERON:0007690,5.10e-13,11;UBERON:0002368,2.97e-09,35;UBERON:0008814,2.42e-08,18;UBERON:0000013,5.73e-08,5;UBERON:0002410,5.73e-08,5;UBERON:0005284,6.55e-08,5;UBERON:0000949,2.38e-07,45 | |||
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| ||
|short_description=p@chr11:134632439..134632474,+ | |short_description=p@chr11:134632439..134632474,+ | ||
}} | }} |
Latest revision as of 20:13, 23 July 2015
Short description: | p@chr11:134632439..134632474, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:134632439..134632474, + |
Coexpression cluster: | C322_thyroid_anaplastic_gastric_testis_papillary_fibrous_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 9.07e-18 | 2 |
hepatic stellate cell | 2.31e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 2.72e-27 | 5 |
pharyngeal pouch | 2.72e-27 | 5 |
thyroid diverticulum | 2.72e-27 | 5 |
pharyngeal pouch 2 | 2.72e-27 | 5 |
thyroid primordium | 2.72e-27 | 5 |
vascular plexus | 9.07e-18 | 2 |
ventricle of nervous system | 9.07e-18 | 2 |
choroid plexus | 9.07e-18 | 2 |
brain ventricle | 9.07e-18 | 2 |
ventricular system of brain | 9.07e-18 | 2 |
ventricular system of central nervous system | 9.07e-18 | 2 |
entire pharyngeal arch endoderm | 5.10e-13 | 11 |
early pharyngeal endoderm | 5.10e-13 | 11 |
endocrine gland | 2.97e-09 | 35 |
pharyngeal arch system | 2.42e-08 | 18 |
sympathetic nervous system | 5.73e-08 | 5 |
autonomic nervous system | 5.73e-08 | 5 |
brain vasculature | 6.55e-08 | 5 |
endocrine system | 2.38e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.58e-07 | 6 |