FFCP PHASE1:Hg19::chr11:1263559..1263572,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:1263559..1263572,+ | |||
|coexpression_cluster_id=C251 | |||
|description=CAGE_peak_at_chr11:1263559..1263572,+ | |||
|id=chr11:1263559..1263572,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.82e-13;1!UBERON:0006595;3.14e-09;86!UBERON:0008814;3.38e-07;2!UBERON:0010056;3.38e-07;2!UBERON:0006965;3.93e-07;2 | |||
|ontology_enrichment_disease=DOID:3493!1.19e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:3910;4.98e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,4.69e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.62e-17!129;UBERON:0004185!1.62e-17!129;UBERON:0001041!2.12e-15!98;UBERON:0001007!5.39e-15!155;UBERON:0001555!5.39e-15!155;UBERON:0007026!5.39e-15!155;UBERON:0001723!3.26e-14!3;UBERON:0001033!3.26e-14!3;UBERON:0010056!3.26e-14!3;UBERON:0004119!2.99e-13!169;UBERON:0000925!2.99e-13!169;UBERON:0006595!2.99e-13!169;UBERON:0000077!4.20e-13!130;UBERON:0003127!7.53e-11!2;UBERON:0000341!4.63e-10!2;UBERON:0007023!7.54e-10!115;UBERON:0000078!1.03e-08!18;UBERON:0000065!2.33e-08!53;UBERON:0001004!4.61e-08!72;UBERON:0001042!1.45e-07!10;UBERON:0009145!1.45e-07!10;UBERON:0005178!2.07e-07!34;UBERON:0002224!2.07e-07!34;UBERON:0000166!2.25e-07!21;UBERON:0005181!3.67e-07!35;UBERON:0000915!6.11e-07!52;UBERON:0006562!7.03e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;6.29e-25;2!UBERON:0002372;1.61e-13;1!UBERON:0001961;1.61e-13;1!UBERON:0001744;1.61e-13;1!UBERON:0001042;1.61e-13;1!UBERON:0001735;1.61e-13;1!UBERON:0002294;8.35e-08;7!UBERON:0001173;8.35e-08;7!UBERON:0003126;8.64e-08;7!UBERON:0001005;8.64e-08;7!UBERON:0007196;1.17e-07;15!UBERON:0001558;1.17e-07;15!UBERON:0006562;2.15e-07;2!UBERON:0000341;4.98e-07;2!UBERON:0004903;4.98e-07;2!UBERON:0002173;4.98e-07;2!UBERON:0002186;4.98e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,5.58e-25,2;UBERON:0002372,1.61e-13,1;UBERON:0001961,1.61e-13,1;UBERON:0001744,1.61e-13,1;UBERON:0001735,1.61e-13,1;UBERON:0004921,1.65e-10,118;UBERON:0001007,5.12e-10,145;UBERON:0001555,5.12e-10,145;UBERON:0007026,5.12e-10,145;UBERON:0004119,6.29e-09,160;UBERON:0000925,6.29e-09,160;UBERON:0006595,6.29e-09,160;UBERON:0000072,1.04e-08,47;UBERON:0001041,7.54e-08,87;UBERON:0003126,8.35e-08,7;UBERON:0001005,8.35e-08,7;UBERON:0007196,1.12e-07,15;UBERON:0001558,1.12e-07,15;UBERON:0000065,1.58e-07,54;UBERON:0007023,2.55e-07,114;UBERON:0001004,3.23e-07,74;UBERON:0004903,4.69e-07,2;UBERON:0002173,4.69e-07,2;UBERON:0002186,4.69e-07,2;UBERON:0000341,4.98e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37061319387782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78947183551498,0,0,0,0,0,0,5.19161406559267,0,0,0,0,0,0,0,0,0.262379999988587,0,0,1.5255219017566,0,0,0,0,0,0,0,0,0,0,0,0,4.30921447621264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,18.3569575475843,0,0.144090417154106,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,1.71086837884329,0.704815022316672,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,3.22571065487001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59295566466361,0,0,0,0,0,0,0,0.098150233615243,0.487671699929078,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0.178553938605658,0,0,0.730336388246517,0.458729283404541,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,1.27940389140589,0.23806443146374,0,0,0,0,0,3.70118471424834,0.684466602170562,20.6770802754784,9.82594213879666,5.65522606128223,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr11:1263559..1263572,+ | |||
}} |
Latest revision as of 19:46, 23 July 2015
Short description: | p@chr11:1263559..1263572, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1263559..1263572, + |
Coexpression cluster: | C251_gall_tonsil_trachea_CD14_salivary_throat_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 5.58e-25 | 2 |
tonsil | 1.61e-13 | 1 |
mucosa-associated lymphoid tissue | 1.61e-13 | 1 |
lymphoid tissue | 1.61e-13 | 1 |
tonsillar ring | 1.61e-13 | 1 |
subdivision of digestive tract | 1.65e-10 | 118 |
digestive system | 5.12e-10 | 145 |
digestive tract | 5.12e-10 | 145 |
primitive gut | 5.12e-10 | 145 |
endoderm-derived structure | 6.29e-09 | 160 |
endoderm | 6.29e-09 | 160 |
presumptive endoderm | 6.29e-09 | 160 |
segment of respiratory tract | 1.04e-08 | 47 |
foregut | 7.54e-08 | 87 |
trachea | 8.35e-08 | 7 |
respiratory airway | 8.35e-08 | 7 |
tracheobronchial tree | 1.12e-07 | 15 |
lower respiratory tract | 1.12e-07 | 15 |
respiratory tract | 1.58e-07 | 54 |
adult organism | 2.55e-07 | 114 |
respiratory system | 3.23e-07 | 74 |
bronchoalveolar duct junction | 4.69e-07 | 2 |
alveolar duct | 4.69e-07 | 2 |
bronchiole | 4.69e-07 | 2 |
throat | 4.98e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 4.69e-07 | 2 |