FFCP PHASE1:Hg19::chr11:1248306..1248342,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:1248306..1248342,+ to FFCP PHASE1:Hg19::chr11:1248306..1248342,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:1248306..1248342,+ | |||
|coexpression_cluster_id=C346 | |||
|description=CAGE_peak_at_chr11:1248306..1248342,+ | |||
|id=chr11:1248306..1248342,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.53e-21;1!UBERON:0000358;3.82e-21;1!UBERON:0008814;2.88e-11;2!UBERON:0010056;2.88e-11;2!UBERON:0006965;4.09e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!3.30e-17!2;UBERON:0001004!2.34e-13!72;UBERON:0000065!5.69e-13!53;UBERON:0004921!3.27e-12!129;UBERON:0004185!3.27e-12!129;UBERON:0001723!1.74e-11!3;UBERON:0001033!1.74e-11!3;UBERON:0010056!1.74e-11!3;UBERON:0001007!3.53e-11!155;UBERON:0001555!3.53e-11!155;UBERON:0007026!3.53e-11!155;UBERON:0001041!5.74e-11!98;UBERON:0000078!8.25e-11!18;UBERON:0000077!1.33e-10!130;UBERON:0004119!5.36e-10!169;UBERON:0000925!5.36e-10!169;UBERON:0006595!5.36e-10!169;UBERON:0000072!9.45e-10!46;UBERON:0002372!2.04e-09!1;UBERON:0001961!2.04e-09!1;UBERON:0001744!2.04e-09!1;UBERON:0001735!2.04e-09!1;UBERON:0000166!3.09e-09!21;UBERON:0008947!4.06e-09!38;UBERON:0003258!4.06e-09!38;UBERON:0007023!4.08e-09!115;UBERON:0007029!4.91e-09!1;UBERON:0001736!5.31e-09!1;UBERON:0006298!5.31e-09!1;UBERON:0002171!6.22e-09!1;UBERON:0006518!6.22e-09!1;UBERON:0008949!6.22e-09!1;UBERON:0000101!6.22e-09!1;UBERON:0002167!6.22e-09!1;UBERON:0002038!9.17e-09!1;UBERON:0009661!9.17e-09!1;UBERON:0005178!1.05e-07!34;UBERON:0002224!1.05e-07!34;UBERON:0001042!1.09e-07!10;UBERON:0009145!1.09e-07!10;UBERON:0000161!1.50e-07!35;UBERON:0005181!1.80e-07!35;UBERON:0006562!4.99e-07!11;UBERON:0000165!7.16e-07!28;UBERON:0000930!7.16e-07!28;UBERON:0001557!9.66e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;5.99e-41;2!UBERON:0002372;3.82e-21;1!UBERON:0001961;3.82e-21;1!UBERON:0001744;3.82e-21;1!UBERON:0001042;3.82e-21;1!UBERON:0001735;3.82e-21;1!UBERON:0003126;1.78e-12;7!UBERON:0001005;1.78e-12;7!UBERON:0006562;2.88e-11;2!UBERON:0002110;4.52e-08;3!UBERON:0001723;6.13e-08;3!UBERON:0001033;6.13e-08;3!UBERON:0000165;5.19e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,5.99e-41,2;UBERON:0002372,2.82e-21,1;UBERON:0001961,2.82e-21,1;UBERON:0001744,2.82e-21,1;UBERON:0001735,2.82e-21,1;UBERON:0003126,1.78e-12,7;UBERON:0001005,1.78e-12,7;UBERON:0001042,6.04e-09,10;UBERON:0009145,6.04e-09,10;UBERON:0000166,8.70e-09,22;UBERON:0007023,2.74e-08,114;UBERON:0006562,3.25e-08,11;UBERON:0002110,4.52e-08,3;UBERON:0006242,4.52e-08,3;UBERON:0001723,5.93e-08,3;UBERON:0001033,5.93e-08,3;UBERON:0010056,5.93e-08,3;UBERON:0000072,3.63e-07,47;UBERON:0001004,7.43e-07,74;UBERON:0000165,8.42e-07,29;UBERON:0000930,8.42e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39473591775749,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,1.38510465306835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.0645815054991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0.427149650270779,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58136415292167,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0.852935927603924,0,0,0,0,0,0,2.8303177226605,0.684466602170562,2.96349033264185,3.87299909120452,4.9899053481902,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39473591775749,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,1.38510465306835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.0645815054991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0.427149650270779,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58136415292167,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0.852935927603924,0,0,0,0,0,0,2.8303177226605,0.684466602170562,2.96349033264185,3.87299909120452,4.9899053481902,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p@chr11:1248306..1248342,+ | |||
}} | }} |
Latest revision as of 19:37, 23 July 2015
Short description: | p@chr11:1248306..1248342, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1248306..1248342, + |
Coexpression cluster: | C346_gall_ductus_seminal_temporal_duodenum_Hepatocyte_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 5.99e-41 | 2 |
tonsil | 2.82e-21 | 1 |
mucosa-associated lymphoid tissue | 2.82e-21 | 1 |
lymphoid tissue | 2.82e-21 | 1 |
tonsillar ring | 2.82e-21 | 1 |
trachea | 1.78e-12 | 7 |
respiratory airway | 1.78e-12 | 7 |
chordate pharynx | 6.04e-09 | 10 |
pharyngeal region of foregut | 6.04e-09 | 10 |
oral opening | 8.70e-09 | 22 |
adult organism | 2.74e-08 | 114 |
pharynx | 3.25e-08 | 11 |
gallbladder | 4.52e-08 | 3 |
gall bladder primordium | 4.52e-08 | 3 |
tongue | 5.93e-08 | 3 |
gustatory system | 5.93e-08 | 3 |
future tongue | 5.93e-08 | 3 |
segment of respiratory tract | 3.63e-07 | 47 |
respiratory system | 7.43e-07 | 74 |
mouth | 8.42e-07 | 29 |
stomodeum | 8.42e-07 | 29 |