FFCP PHASE1:Hg19::chr11:122537770..122537771,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:122537770..122537771,+ to FFCP PHASE1:Hg19::chr11:122537770..122537771,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:122537770..122537771,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr11:122537770..122537771,+ | |||
|id=chr11:122537770..122537771,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.40e-12!42;CL:0000860!7.27e-11!45;CL:0002009!8.45e-10!65;CL:0000557!1.80e-09!71;CL:0002194!3.40e-09!63;CL:0000576!3.40e-09!63;CL:0000040!3.40e-09!63;CL:0000559!3.40e-09!63;CL:0000839!1.11e-08!70;CL:0000766!1.48e-08!76;CL:0002393!2.90e-08!9;CL:0002397!2.90e-08!9;CL:0000763!6.45e-08!112;CL:0000049!6.45e-08!112;CL:0002031!1.33e-07!124;CL:0002032!3.30e-07!165;CL:0000837!3.30e-07!165;CL:0002087!7.88e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000775;2.62e-23;3!CL:0000094;1.24e-09;8!CL:0000081;2.32e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.62e-23,3;CL:0000094,1.24e-09,8;CL:0000081,2.32e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.27e-23;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.24e-08!80;UBERON:0001474!7.77e-07!86;UBERON:0002390!9.76e-07!102;UBERON:0003061!9.76e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;4.09e-23;3!UBERON:0005290;4.09e-23;3!UBERON:0004733;5.74e-23;12!UBERON:0002028;5.74e-23;12!UBERON:0004732;2.66e-21;13!UBERON:0002037;2.45e-12;6!UBERON:0002298;2.74e-12;6!UBERON:0002680;1.12e-08;9!UBERON:0001895;1.12e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,4.09e-23,3;UBERON:0005290,4.09e-23,3;UBERON:0010096,4.09e-23,3;UBERON:0004733,5.74e-23,12;UBERON:0002028,5.74e-23,12;UBERON:0007277,5.74e-23,12;UBERON:0004732,2.66e-21,13;UBERON:0003076,1.24e-18,15;UBERON:0003057,1.24e-18,15;UBERON:0002037,2.45e-12,6;UBERON:0006215,2.45e-12,6;UBERON:0002298,2.74e-12,6;UBERON:0002680,1.12e-08,9;UBERON:0001895,1.12e-08,9;UBERON:0010092,1.12e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.651032612147555,0.223915474239924,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0.464858073811369,0.411167888021826,0.929119112685311,0,0.256160706529101,0,0.344745680736619,0,0,0,0.272906150057846,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0.211255286311942,0.212604299965044,0,0,0,0,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0.167186495390678,0.32592226663359,0,0,0,0.294605907474837,0,0,0.128091319725675,0,0.493313713811028,0.276350017785848,0,0.296573126324121,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,5.9832291840805,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0.0711418433484141,0,0,0.191505370132367,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21158519862449,0.591095237907095,0,0,0.139423744278603,0,0,0,0.0897576444097721,0,0.638002319463839,0,0,0,0.156980256395025,0,0,0,0,0,0.317873157960757,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0.306345576763462,0,0,0,0,0,1.14681839138014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0.118920090777569,0,0,0,0.0771741581079447,0,0,0,0.235676547101626,0.588925401344836,0.297046400327086,0,0,0,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0,0.436350690340377,0.5290268405154,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0.829169439458779,0.310298987585686,0,0,0.129177819672012,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.651032612147555,0.223915474239924,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0.464858073811369,0.411167888021826,0.929119112685311,0,0.256160706529101,0,0.344745680736619,0,0,0,0.272906150057846,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0.211255286311942,0.212604299965044,0,0,0,0,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0.167186495390678,0.32592226663359,0,0,0,0.294605907474837,0,0,0.128091319725675,0,0.493313713811028,0.276350017785848,0,0.296573126324121,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,5.9832291840805,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0.0711418433484141,0,0,0.191505370132367,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21158519862449,0.591095237907095,0,0,0.139423744278603,0,0,0,0.0897576444097721,0,0.638002319463839,0,0,0,0.156980256395025,0,0,0,0,0,0.317873157960757,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0.306345576763462,0,0,0,0,0,1.14681839138014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0.118920090777569,0,0,0,0.0771741581079447,0,0,0,0.235676547101626,0.588925401344836,0.297046400327086,0,0,0,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0,0.436350690340377,0.5290268405154,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0.829169439458779,0.310298987585686,0,0,0.129177819672012,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:122537770..122537771,+ | |||
}} | }} |
Latest revision as of 19:20, 23 July 2015
Short description: | p@chr11:122537770..122537771, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:122537770..122537771, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.62e-23 | 3 |
granulocyte | 1.24e-09 | 8 |
blood cell | 2.32e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 4.09e-23 | 3 |
myelencephalon | 4.09e-23 | 3 |
future myelencephalon | 4.09e-23 | 3 |
segmental subdivision of hindbrain | 5.74e-23 | 12 |
hindbrain | 5.74e-23 | 12 |
presumptive hindbrain | 5.74e-23 | 12 |
segmental subdivision of nervous system | 2.66e-21 | 13 |
posterior neural tube | 1.24e-18 | 15 |
chordal neural plate | 1.24e-18 | 15 |
cerebellum | 2.45e-12 | 6 |
rhombic lip | 2.45e-12 | 6 |
brainstem | 2.74e-12 | 6 |
regional part of metencephalon | 1.12e-08 | 9 |
metencephalon | 1.12e-08 | 9 |
future metencephalon | 1.12e-08 | 9 |