FFCP PHASE1:Hg19::chr11:122537770..122537771,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:122537770..122537771,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr11:122537770..122537771,+ | |description=CAGE_peak_at_chr11:122537770..122537771,+ | ||
|id=chr11:122537770..122537771,+ | |id=chr11:122537770..122537771,+ | ||
|ontology_enrichment_celltype=CL:0002057!5.40e-12!42;CL:0000860!7.27e-11!45;CL:0002009!8.45e-10!65;CL:0000557!1.80e-09!71;CL:0002194!3.40e-09!63;CL:0000576!3.40e-09!63;CL:0000040!3.40e-09!63;CL:0000559!3.40e-09!63;CL:0000839!1.11e-08!70;CL:0000766!1.48e-08!76;CL:0002393!2.90e-08!9;CL:0002397!2.90e-08!9;CL:0000763!6.45e-08!112;CL:0000049!6.45e-08!112;CL:0002031!1.33e-07!124;CL:0002032!3.30e-07!165;CL:0000837!3.30e-07!165;CL:0002087!7.88e-07!119 | |ontology_enrichment_celltype=CL:0002057!5.40e-12!42;CL:0000860!7.27e-11!45;CL:0002009!8.45e-10!65;CL:0000557!1.80e-09!71;CL:0002194!3.40e-09!63;CL:0000576!3.40e-09!63;CL:0000040!3.40e-09!63;CL:0000559!3.40e-09!63;CL:0000839!1.11e-08!70;CL:0000766!1.48e-08!76;CL:0002393!2.90e-08!9;CL:0002397!2.90e-08!9;CL:0000763!6.45e-08!112;CL:0000049!6.45e-08!112;CL:0002031!1.33e-07!124;CL:0002032!3.30e-07!165;CL:0000837!3.30e-07!165;CL:0002087!7.88e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000775;2.62e-23;3!CL:0000094;1.24e-09;8!CL:0000081;2.32e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.62e-23,3;CL:0000094,1.24e-09,8;CL:0000081,2.32e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.27e-23;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.24e-08!80;UBERON:0001474!7.77e-07!86;UBERON:0002390!9.76e-07!102;UBERON:0003061!9.76e-07!102 | |ontology_enrichment_uberon=UBERON:0002371!9.24e-08!80;UBERON:0001474!7.77e-07!86;UBERON:0002390!9.76e-07!102;UBERON:0003061!9.76e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0001896;4.09e-23;3!UBERON:0005290;4.09e-23;3!UBERON:0004733;5.74e-23;12!UBERON:0002028;5.74e-23;12!UBERON:0004732;2.66e-21;13!UBERON:0002037;2.45e-12;6!UBERON:0002298;2.74e-12;6!UBERON:0002680;1.12e-08;9!UBERON:0001895;1.12e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,4.09e-23,3;UBERON:0005290,4.09e-23,3;UBERON:0010096,4.09e-23,3;UBERON:0004733,5.74e-23,12;UBERON:0002028,5.74e-23,12;UBERON:0007277,5.74e-23,12;UBERON:0004732,2.66e-21,13;UBERON:0003076,1.24e-18,15;UBERON:0003057,1.24e-18,15;UBERON:0002037,2.45e-12,6;UBERON:0006215,2.45e-12,6;UBERON:0002298,2.74e-12,6;UBERON:0002680,1.12e-08,9;UBERON:0001895,1.12e-08,9;UBERON:0010092,1.12e-08,9 | |||
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| ||
|short_description=p@chr11:122537770..122537771,+ | |short_description=p@chr11:122537770..122537771,+ | ||
}} | }} |
Latest revision as of 19:20, 23 July 2015
Short description: | p@chr11:122537770..122537771, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:122537770..122537771, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.62e-23 | 3 |
granulocyte | 1.24e-09 | 8 |
blood cell | 2.32e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 4.09e-23 | 3 |
myelencephalon | 4.09e-23 | 3 |
future myelencephalon | 4.09e-23 | 3 |
segmental subdivision of hindbrain | 5.74e-23 | 12 |
hindbrain | 5.74e-23 | 12 |
presumptive hindbrain | 5.74e-23 | 12 |
segmental subdivision of nervous system | 2.66e-21 | 13 |
posterior neural tube | 1.24e-18 | 15 |
chordal neural plate | 1.24e-18 | 15 |
cerebellum | 2.45e-12 | 6 |
rhombic lip | 2.45e-12 | 6 |
brainstem | 2.74e-12 | 6 |
regional part of metencephalon | 1.12e-08 | 9 |
metencephalon | 1.12e-08 | 9 |
future metencephalon | 1.12e-08 | 9 |