FFCP PHASE1:Hg19::chr11:121960926..121960929,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:121960926..121960929,- | |||
|description=CAGE_peak_at_chr11:121960926..121960929,- | |description=CAGE_peak_at_chr11:121960926..121960929,- | ||
|id=chr11:121960926..121960929,- | |id=chr11:121960926..121960929,- | ||
|ontology_enrichment_celltype=CL:0000055!5.45e-30!180;CL:0000057!6.08e-18!75;CL:0000680!2.22e-13!57;CL:0000056!2.22e-13!57;CL:0000355!2.22e-13!57;CL:0000187!4.32e-12!54;CL:0000393!8.94e-12!60;CL:0000211!8.94e-12!60;CL:0000183!1.21e-10!59;CL:0002620!1.41e-09!23;CL:0000192!9.57e-09!42;CL:0000514!9.57e-09!42;CL:0000359!4.98e-07!32 | |ontology_enrichment_celltype=CL:0000055!5.45e-30!180;CL:0000057!6.08e-18!75;CL:0000680!2.22e-13!57;CL:0000056!2.22e-13!57;CL:0000355!2.22e-13!57;CL:0000187!4.32e-12!54;CL:0000393!8.94e-12!60;CL:0000211!8.94e-12!60;CL:0000183!1.21e-10!59;CL:0002620!1.41e-09!23;CL:0000192!9.57e-09!42;CL:0000514!9.57e-09!42;CL:0000359!4.98e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.99e-10;23!CL:0000057;2.31e-09;73!CL:0000359;4.45e-08;32!CL:0000393;5.40e-08;61!CL:0000211;5.40e-08;61!CL:0000187;5.67e-08;55!CL:0000192;2.89e-07;43!CL:0002334;9.19e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.50e-21,76;CL:0000680,3.25e-15,58;CL:0000056,3.25e-15,58;CL:0000355,3.25e-15,58;CL:0000393,8.19e-14,61;CL:0000211,8.19e-14,61;CL:0000187,1.03e-13,55;CL:0002620,1.82e-10,23;CL:0000192,8.28e-10,43;CL:0000514,8.28e-10,43;CL:0000359,3.88e-08,32 | |||
|ontology_enrichment_development_v019=CL:0000355;7.93e-09;58!CL:0000514;2.89e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;6.31e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.71e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!2.48e-21!365;UBERON:0000914!1.43e-16!83;UBERON:0002329!1.43e-16!83;UBERON:0003077!1.43e-16!83;UBERON:0003059!1.43e-16!83;UBERON:0007282!1.43e-16!83;UBERON:0009618!1.43e-16!83;UBERON:0007285!1.43e-16!83;UBERON:0000481!2.41e-15!347;UBERON:0004290!1.09e-13!70;UBERON:0000486!1.79e-12!82;UBERON:0002385!1.96e-12!63;UBERON:0001015!1.96e-12!63;UBERON:0000383!1.96e-12!63;UBERON:0001134!2.67e-12!61;UBERON:0002036!2.67e-12!61;UBERON:0003082!2.67e-12!61;UBERON:0000119!2.30e-11!312;UBERON:0000468!2.62e-11!659;UBERON:0000483!4.24e-11!309;UBERON:0004121!1.86e-09!169;UBERON:0005256!1.94e-09!143;UBERON:0000033!5.51e-09!123;UBERON:0000924!6.35e-09!173;UBERON:0006601!6.35e-09!173;UBERON:0000467!9.12e-09!625;UBERON:0000477!9.26e-09!286;UBERON:0000073!1.14e-08!94;UBERON:0001016!1.14e-08!94;UBERON:0000480!1.37e-08!626;UBERON:0000153!1.41e-08!129;UBERON:0007811!1.41e-08!129;UBERON:0005743!2.09e-08!86;UBERON:0003102!2.66e-08!95;UBERON:0001017!6.79e-08!82;UBERON:0002100!1.09e-07!216;UBERON:0003075!1.12e-07!86;UBERON:0007284!1.12e-07!86;UBERON:0002616!1.32e-07!59;UBERON:0002050!1.60e-07!605;UBERON:0005423!1.60e-07!605;UBERON:0000922!1.99e-07!612;UBERON:0000923!2.78e-07!604;UBERON:0005291!2.78e-07!604;UBERON:0006598!2.78e-07!604;UBERON:0002532!2.78e-07!604;UBERON:0000955!5.11e-07!69;UBERON:0006238!5.11e-07!69;UBERON:0001049!5.35e-07!57;UBERON:0005068!5.35e-07!57;UBERON:0006241!5.35e-07!57;UBERON:0007135!5.35e-07!57;UBERON:0002346!5.52e-07!90;UBERON:0002199!6.22e-07!45;UBERON:0002416!6.22e-07!45 | |ontology_enrichment_uberon=UBERON:0000475!2.48e-21!365;UBERON:0000914!1.43e-16!83;UBERON:0002329!1.43e-16!83;UBERON:0003077!1.43e-16!83;UBERON:0003059!1.43e-16!83;UBERON:0007282!1.43e-16!83;UBERON:0009618!1.43e-16!83;UBERON:0007285!1.43e-16!83;UBERON:0000481!2.41e-15!347;UBERON:0004290!1.09e-13!70;UBERON:0000486!1.79e-12!82;UBERON:0002385!1.96e-12!63;UBERON:0001015!1.96e-12!63;UBERON:0000383!1.96e-12!63;UBERON:0001134!2.67e-12!61;UBERON:0002036!2.67e-12!61;UBERON:0003082!2.67e-12!61;UBERON:0000119!2.30e-11!312;UBERON:0000468!2.62e-11!659;UBERON:0000483!4.24e-11!309;UBERON:0004121!1.86e-09!169;UBERON:0005256!1.94e-09!143;UBERON:0000033!5.51e-09!123;UBERON:0000924!6.35e-09!173;UBERON:0006601!6.35e-09!173;UBERON:0000467!9.12e-09!625;UBERON:0000477!9.26e-09!286;UBERON:0000073!1.14e-08!94;UBERON:0001016!1.14e-08!94;UBERON:0000480!1.37e-08!626;UBERON:0000153!1.41e-08!129;UBERON:0007811!1.41e-08!129;UBERON:0005743!2.09e-08!86;UBERON:0003102!2.66e-08!95;UBERON:0001017!6.79e-08!82;UBERON:0002100!1.09e-07!216;UBERON:0003075!1.12e-07!86;UBERON:0007284!1.12e-07!86;UBERON:0002616!1.32e-07!59;UBERON:0002050!1.60e-07!605;UBERON:0005423!1.60e-07!605;UBERON:0000922!1.99e-07!612;UBERON:0000923!2.78e-07!604;UBERON:0005291!2.78e-07!604;UBERON:0006598!2.78e-07!604;UBERON:0002532!2.78e-07!604;UBERON:0000955!5.11e-07!69;UBERON:0006238!5.11e-07!69;UBERON:0001049!5.35e-07!57;UBERON:0005068!5.35e-07!57;UBERON:0006241!5.35e-07!57;UBERON:0007135!5.35e-07!57;UBERON:0002346!5.52e-07!90;UBERON:0002199!6.22e-07!45;UBERON:0002416!6.22e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;6.09e-07;31!UBERON:0001015;6.09e-07;31!UBERON:0000383;6.09e-07;31 | |||
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| ||
|short_description=p@chr11:121960926..121960929,- | |short_description=p@chr11:121960926..121960929,- | ||
}} | }} |
Latest revision as of 19:15, 23 July 2015
Short description: | p@chr11:121960926..121960929, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:121960926..121960929, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.50e-21 | 76 |
muscle precursor cell | 3.25e-15 | 58 |
myoblast | 3.25e-15 | 58 |
multi-potent skeletal muscle stem cell | 3.25e-15 | 58 |
electrically responsive cell | 8.19e-14 | 61 |
electrically active cell | 8.19e-14 | 61 |
muscle cell | 1.03e-13 | 55 |
skin fibroblast | 1.82e-10 | 23 |
smooth muscle cell | 8.28e-10 | 43 |
smooth muscle myoblast | 8.28e-10 | 43 |
vascular associated smooth muscle cell | 3.88e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 5.86e-17 | 73 |
paraxial mesoderm | 1.56e-16 | 72 |
presumptive paraxial mesoderm | 1.56e-16 | 72 |
somite | 4.57e-16 | 71 |
presomitic mesoderm | 4.57e-16 | 71 |
presumptive segmental plate | 4.57e-16 | 71 |
dermomyotome | 4.57e-16 | 71 |
trunk paraxial mesoderm | 4.57e-16 | 71 |
skeletal muscle tissue | 2.79e-14 | 62 |
striated muscle tissue | 2.79e-14 | 62 |
myotome | 2.79e-14 | 62 |
multilaminar epithelium | 2.98e-14 | 83 |
muscle tissue | 4.46e-14 | 64 |
musculature | 4.46e-14 | 64 |
musculature of body | 4.46e-14 | 64 |
structure with developmental contribution from neural crest | 4.23e-13 | 132 |
epithelial vesicle | 8.80e-13 | 78 |
mesenchyme | 4.29e-10 | 160 |
entire embryonic mesenchyme | 4.29e-10 | 160 |
trunk mesenchyme | 1.38e-09 | 122 |
epithelium | 1.19e-08 | 306 |
cell layer | 1.51e-08 | 309 |
integument | 9.62e-08 | 46 |
integumental system | 9.62e-08 | 46 |
skin of body | 1.21e-07 | 41 |
neural plate | 2.63e-07 | 82 |
presumptive neural plate | 2.63e-07 | 82 |
surface structure | 4.71e-07 | 99 |
ectoderm-derived structure | 5.12e-07 | 171 |
ectoderm | 5.12e-07 | 171 |
presumptive ectoderm | 5.12e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.71e-07 | 14 |