FFCP PHASE1:Hg19::chr11:119290894..119290943,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_BC009328_5end | |association_with_transcript=-18bp_to_BC009328_5end | ||
|cluster_id=chr11:119290894..119290943,- | |||
|coexpression_cluster_id=C879 | |||
|description=CAGE_peak_1_at_BC009328_5end | |description=CAGE_peak_1_at_BC009328_5end | ||
|id=chr11:119290894..119290943,- | |id=chr11:119290894..119290943,- | ||
|ontology_enrichment_celltype=CL:0000055!1.78e-31!180;CL:0000057!1.68e-21!75;CL:0000393!5.96e-09!60;CL:0000211!5.96e-09!60;CL:0002334!3.41e-08!12;CL:0000680!4.04e-08!57;CL:0000056!4.04e-08!57;CL:0000355!4.04e-08!57;CL:0002620!7.37e-08!23;CL:0000187!2.66e-07!54;CL:0000183!5.95e-07!59 | |ontology_enrichment_celltype=CL:0000055!1.78e-31!180;CL:0000057!1.68e-21!75;CL:0000393!5.96e-09!60;CL:0000211!5.96e-09!60;CL:0002334!3.41e-08!12;CL:0000680!4.04e-08!57;CL:0000056!4.04e-08!57;CL:0000355!4.04e-08!57;CL:0002620!7.37e-08!23;CL:0000187!2.66e-07!54;CL:0000183!5.95e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.11e-09;23!CL:0002334;1.67e-09;12!CL:0000057;2.43e-09;73!CL:0002320;2.90e-08;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.25e-24,76;CL:0002620,1.01e-09,23;CL:0002334,1.35e-09,12;CL:0000048,2.59e-07,427;CL:0000034,3.05e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.38e-16!365;UBERON:0000914!2.03e-12!83;UBERON:0002329!2.03e-12!83;UBERON:0003077!2.03e-12!83;UBERON:0003059!2.03e-12!83;UBERON:0007282!2.03e-12!83;UBERON:0009618!2.03e-12!83;UBERON:0007285!2.03e-12!83;UBERON:0001017!2.84e-11!82;UBERON:0001869!4.60e-11!32;UBERON:0001049!4.89e-11!57;UBERON:0005068!4.89e-11!57;UBERON:0006241!4.89e-11!57;UBERON:0007135!4.89e-11!57;UBERON:0002780!9.51e-11!41;UBERON:0001890!9.51e-11!41;UBERON:0006240!9.51e-11!41;UBERON:0002020!2.84e-10!34;UBERON:0003528!2.84e-10!34;UBERON:0001893!3.19e-10!34;UBERON:0005743!3.73e-10!86;UBERON:0003080!3.81e-10!42;UBERON:0004290!5.92e-10!70;UBERON:0002791!6.19e-10!33;UBERON:0002616!1.35e-09!59;UBERON:0003102!3.08e-09!95;UBERON:0000956!3.28e-09!25;UBERON:0000203!3.28e-09!25;UBERON:0000955!6.38e-09!69;UBERON:0006238!6.38e-09!69;UBERON:0002619!7.70e-09!22;UBERON:0000486!9.99e-09!82;UBERON:0002199!1.73e-08!45;UBERON:0002416!1.73e-08!45;UBERON:0001950!2.78e-08!20;UBERON:0001013!3.21e-08!14;UBERON:0000073!3.72e-08!94;UBERON:0001016!3.72e-08!94;UBERON:0001134!7.77e-08!61;UBERON:0002036!7.77e-08!61;UBERON:0003082!7.77e-08!61;UBERON:0002385!8.52e-08!63;UBERON:0001015!8.52e-08!63;UBERON:0000383!8.52e-08!63;UBERON:0000033!1.05e-07!123;UBERON:0002346!1.05e-07!90;UBERON:0003075!1.11e-07!86;UBERON:0007284!1.11e-07!86;UBERON:0005256!1.25e-07!143;UBERON:0000481!1.53e-07!347;UBERON:0000153!2.27e-07!129;UBERON:0007811!2.27e-07!129;UBERON:0000924!2.80e-07!173;UBERON:0006601!2.80e-07!173;UBERON:0000468!3.13e-07!659;UBERON:0004121!3.49e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.67e-10;32!UBERON:0002619;2.01e-09;22!UBERON:0002791;2.76e-09;32!UBERON:0000956;2.93e-09;25!UBERON:0000203;2.93e-09;25!UBERON:0003528;6.15e-09;34!UBERON:0002020;6.15e-09;34!UBERON:0001950;7.64e-09;20!UBERON:0001013;8.98e-09;14!UBERON:0001893;1.17e-08;34!UBERON:0002384;1.16e-07;198!UBERON:0002199;3.95e-07;46!UBERON:0002416;3.95e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,3.72e-11,32;UBERON:0002199,2.12e-10,46;UBERON:0002416,2.12e-10,46;UBERON:0002791,3.39e-10,32;UBERON:0001893,5.79e-10,34;UBERON:0003528,7.19e-10,34;UBERON:0002020,7.19e-10,34;UBERON:0002619,1.23e-09,22;UBERON:0000956,1.58e-09,25;UBERON:0000203,1.58e-09,25;UBERON:0001950,5.84e-09,20;UBERON:0002780,7.52e-09,41;UBERON:0001890,7.52e-09,41;UBERON:0003080,7.52e-09,41;UBERON:0006240,7.52e-09,41;UBERON:0001013,1.04e-08,14;UBERON:0001049,2.61e-08,56;UBERON:0005068,2.61e-08,56;UBERON:0006241,2.61e-08,56;UBERON:0007135,2.61e-08,56;UBERON:0007524,3.45e-08,73;UBERON:0000073,4.12e-08,53;UBERON:0002616,4.12e-08,53;UBERON:0001017,4.18e-08,81;UBERON:0003077,8.38e-08,72;UBERON:0007285,8.38e-08,72;UBERON:0003102,1.66e-07,99;UBERON:0002329,1.89e-07,71;UBERON:0003059,1.89e-07,71;UBERON:0007282,1.89e-07,71;UBERON:0004290,1.89e-07,71;UBERON:0009618,1.89e-07,71;UBERON:0002097,2.05e-07,41;UBERON:0007503,6.47e-07,78 | |||
|phase1_expression=22.1647622710079,43.8906073976515,11.5582611358696,19.0139266870948,47.3778760092925,6.10636966870258,40.5279805069297,20.2150359496586,24.0290777943851,0,0,1.74753097704138,1.84636884759917,2.35156070624089,2.31978163009541,3.36162573225888,2.41077811209591,2.19093027116212,2.92759679274304,0.861847406537515,3.26401105990805,2.5076377718247,0.572471974262113,3.28498620174922,1.88313959392204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.895037932904712,16.62620100969,35.5949916551482,18.6852009459463,4.7717156823066,3.40644409211845,0,0.221729397462564,0.263504357079378,1.96468613246569,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,6.95760732373446,2.02608818663328,2.64818361626438,36.1414142143505,8.51204117276057,3.92474320099615,2.1349799145941,1.48000529050296,0.933633106199299,0,0.163461903113459,0,0,0.70296429550139,4.05808099879417,0,2.83952493048422,4.46251094846307,3.0755859429945,3.93262258766296,3.0623125688234,5.40470996171779,4.75298593408521,15.4440371446667,14.5887488274349,1.82032272387605,4.31170885089743,1.85169725349473,4.62938523526267,1.10825646193673,7.90159717585508,15.017901994152,4.6573798261045,0.680593098960126,6.99619579186562,6.19316427573846,8.26534414522291,7.20218630602566,7.11062451745228,1.8034837803194,11.5392450925586,4.38818463827292,12.3744996554722,3.78650661366172,10.4936884452221,8.08230284094059,12.0703261455649,9.57144933162582,4.0694542154517,0,0.272746120590835,0.573609190778008,4.87894824518382,1.98794652482228,4.06678800043314,1.7622379352613,3.02785021050754,1.09493207722749,4.69348596989448,7.07565032012174,6.90674606762403,4.17931135228781,5.0531563716871,0,0,0,0,0,0,0,0,0,0.738155454624648,12.6217596423101,2.057870056657,5.88034845542168,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0.977424915930974,9.35941306751621,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0,0,0.766765358330422,0,0,0,0,0,0,0,0,6.84289784090821,0.102827492703324,0.300343057843917,1.14330573052231,0.224262168690721,0,0,6.46358578788889,21.4593867511129,1.690605505112,3.19125739901845,5.2003718455683,0.514414748524284,0,0.266422179016099,0.428933980974443,3.7983512377401,1.64648067356154,0.977208552881205,0,3.16780749173372,8.44030255766841,11.3299349618038,8.09781228574662,0,0,0,1.4377491329495,1.14861935834114,0,5.06734573336527,5.75333703141074,1.43248770591916,0,0,0.215627574859517,0,1.01637849688985,0,0.773288812777695,1.00509759200609,1.91381625495949,0,0,0,1.2269149171914,2.00068208423871,0,12.0623099687868,32.8309339386778,9.46214490203608,10.191303104366,6.3198680942821,77.3185513790349,3.10419213877515,2.65690239414175,2.58116835958384,10.0784992782976,0,1.02943027143257,0,0,0,0.303127571446259,11.6504807657348,3.0239029332968,12.9016060065764,1.99500565274481,19.084886421449,6.02254001501795,18.4214609664013,7.07757253031873,11.8734453155993,8.17311377154074,16.3356787288077,7.06293541718759,9.8658341544888,9.99409254755649,0,0.200506470303285,0,12.1703315054483,3.45973219212762,18.0951692644005,0.451199612907412,0,0,0,0.105551628892876,0,0,0.431831832204279,1.54227252690289,1.08378575017541,2.50844886927427,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0.574265537996172,0.650060246036521,17.6752322828576,1.45006077438183,0.924291702687866,1.07452572308291,1.10269257987624,0.322260734604821,2.90033387828457,0.340906509664404,1.78064071293475,0,0.192190067365106,0,0,2.32422774648643,7.55549632393536,0,0,2.12922412126809,1.73986598415015,0.18532421910392,1.28812398067792,0.372158369359667,0.316379424718726,1.5250415513906,0.511795582622668,1.28381696410176,0.318203247925937,1.56989728039846,3.77732160924961,2.74537029736055,0.824686816419805,1.2130948894399,0,0.842516912477962,0.48763373908959,0.974853958525138,11.6215161432431,3.95849743083159,37.4724394677339,4.52032466480971,0.551365343546124,6.6343897524122,4.82295973779139,1.15755106853338,0,4.46402829317949,1.8589409885985,1.69017361519345,2.58140433967293,2.75097314836739,5.35006577221875,3.19284957663538,16.2552879179201,10.5374365747169,1.89736586882858,2.79947776195986,0,0.670302275535787,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0.121360521749513,0.111443384277478,0,0,0,0,14.9122147164945,2.67271891179974,0,0,0.211125408127993,0.597743964753209,0.552567831062295,0,0,0,10.5753459805015,0,0,0,1.38100767891707,0,2.22273980289274,13.5706584453331,4.54563680993071,0,0,0,0,0,0,0,1.37897349296586,0.291604613383254,0.868124974666461,7.08593108651071,1.92954301800653,0,0.331737779793674,3.84211904639612,2.85201016300164,0,0,2.15460723810632,1.82307289355202,0,0,0,0.31900115973192,7.7857954391583,0,1.02193298195737,0,0,0,0,0,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| ||
|short_description=p1@BC009328 | |short_description=p1@BC009328 | ||
}} | }} |
Latest revision as of 19:02, 23 July 2015
Short description: | p1@BC009328 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC009328_5end |
Coexpression cluster: | C879_Osteoblast_Adipocyte_Olfactory_leiomyoma_Smooth_tenocyte_Fibroblast |
Association with transcript: | -18bp_to_BC009328_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.25e-24 | 76 |
skin fibroblast | 1.01e-09 | 23 |
preadipocyte | 1.35e-09 | 12 |
multi fate stem cell | 2.59e-07 | 427 |
stem cell | 3.05e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 3.72e-11 | 32 |
integument | 2.12e-10 | 46 |
integumental system | 2.12e-10 | 46 |
regional part of telencephalon | 3.39e-10 | 32 |
telencephalon | 5.79e-10 | 34 |
brain grey matter | 7.19e-10 | 34 |
gray matter | 7.19e-10 | 34 |
regional part of cerebral cortex | 1.23e-09 | 22 |
cerebral cortex | 1.58e-09 | 25 |
pallium | 1.58e-09 | 25 |
neocortex | 5.84e-09 | 20 |
regional part of forebrain | 7.52e-09 | 41 |
forebrain | 7.52e-09 | 41 |
anterior neural tube | 7.52e-09 | 41 |
future forebrain | 7.52e-09 | 41 |
adipose tissue | 1.04e-08 | 14 |
neural tube | 2.61e-08 | 56 |
neural rod | 2.61e-08 | 56 |
future spinal cord | 2.61e-08 | 56 |
neural keel | 2.61e-08 | 56 |
dense mesenchyme tissue | 3.45e-08 | 73 |
regional part of nervous system | 4.12e-08 | 53 |
regional part of brain | 4.12e-08 | 53 |
central nervous system | 4.18e-08 | 81 |
paraxial mesoderm | 8.38e-08 | 72 |
presumptive paraxial mesoderm | 8.38e-08 | 72 |
surface structure | 1.66e-07 | 99 |
somite | 1.89e-07 | 71 |
presomitic mesoderm | 1.89e-07 | 71 |
presumptive segmental plate | 1.89e-07 | 71 |
dermomyotome | 1.89e-07 | 71 |
trunk paraxial mesoderm | 1.89e-07 | 71 |
skin of body | 2.05e-07 | 41 |
epithelial vesicle | 6.47e-07 | 78 |