FFCP PHASE1:Hg19::chr11:118111865..118111877,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:118111865..118111877,-
|short_description=p@chr11:118111865..118111877,-
|description=CAGE_peak_at_chr11:118111865..118111877,-
|association_with_transcri...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:118111865..118111877,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_at_chr11:118111865..118111877,- | |||
|id=chr11:118111865..118111877,- | |||
|ontology_enrichment_celltype=CL:0000763!2.20e-18!112;CL:0000049!2.20e-18!112;CL:0000766!4.60e-16!76;CL:0002057!3.93e-14!42;CL:0002194!5.20e-13!63;CL:0000576!5.20e-13!63;CL:0000040!5.20e-13!63;CL:0000559!5.20e-13!63;CL:0000839!6.86e-13!70;CL:0000860!9.76e-13!45;CL:0002139!1.68e-12!24;CL:0002009!2.31e-12!65;CL:0000557!1.39e-11!71;CL:0000071!2.14e-11!18;CL:0002546!2.14e-11!18;CL:0000037!4.01e-11!172;CL:0000566!4.01e-11!172;CL:0000988!2.37e-10!182;CL:0002032!3.08e-10!165;CL:0000837!3.08e-10!165;CL:1000413!8.20e-09!9;CL:0000115!2.87e-07!35;CL:0002543!3.57e-07!6;CL:0000738!4.31e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000071;1.79e-20;18!CL:0000094;2.09e-16;8!CL:0002139;3.52e-15;24!CL:1000413;3.62e-14;9!CL:0002543;2.94e-12;6!CL:0000775;5.13e-12;3!CL:0000081;5.48e-12;11!CL:0002618;2.44e-11;3!CL:0000115;1.63e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,1.74e-20,18;CL:0002546,1.74e-20,18;CL:0000094,1.97e-16,8;CL:0002139,3.44e-15,24;CL:1000413,3.69e-14,9;CL:0002543,2.78e-12,6;CL:0000775,5.13e-12,3;CL:0000081,5.26e-12,11;CL:0002618,2.19e-11,3;CL:0000115,7.01e-10,36;CL:0002078,9.41e-08,45 | |||
|ontology_enrichment_development_v019=CL:0002546;1.79e-20;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.40e-21!112;UBERON:0002390!1.93e-19!102;UBERON:0003061!1.93e-19!102;UBERON:0003081!8.13e-13!216;UBERON:0000178!9.23e-13!15;UBERON:0000179!9.23e-13!15;UBERON:0000463!9.23e-13!15;UBERON:0001986!2.14e-11!18;UBERON:0004638!2.14e-11!18;UBERON:0004852!2.14e-11!18;UBERON:0007023!2.88e-10!115;UBERON:0002371!3.02e-10!80;UBERON:0002405!1.23e-09!115;UBERON:0001474!5.70e-09!86;UBERON:0003915!8.20e-09!9;UBERON:0004700!8.20e-09!9;UBERON:0001917!8.20e-09!9;UBERON:0000487!9.95e-09!22;UBERON:0006914!2.62e-07!25;UBERON:0004765!4.27e-07!101;UBERON:0001434!4.27e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.02e-43;15!UBERON:0000179;4.02e-43;15!UBERON:0000463;4.02e-43;15!UBERON:0004638;1.79e-20;18!UBERON:0001986;1.79e-20;18!UBERON:0004852;1.79e-20;18!UBERON:0002390;6.60e-18;32!UBERON:0000487;1.26e-16;22!UBERON:0006914;1.52e-14;25!UBERON:0003915;3.62e-14;9!UBERON:0004700;3.62e-14;9!UBERON:0001917;3.62e-14;9!UBERON:0000490;1.85e-10;33!UBERON:0002193;5.63e-10;42!UBERON:0001638;2.40e-08;9!UBERON:0003920;2.40e-08;9!UBERON:0004582;2.40e-08;9!UBERON:0002066;3.79e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.44e-43,15;UBERON:0000179,4.44e-43,15;UBERON:0000463,4.44e-43,15;UBERON:0004638,1.74e-20,18;UBERON:0001986,1.74e-20,18;UBERON:0004852,1.74e-20,18;UBERON:0000487,1.23e-16,22;UBERON:0004535,5.50e-16,109;UBERON:0001009,1.76e-15,112;UBERON:0006914,1.49e-14,25;UBERON:0003915,3.69e-14,9;UBERON:0004700,3.69e-14,9;UBERON:0001917,3.69e-14,9;UBERON:0003081,8.02e-11,203;UBERON:0002390,9.64e-10,98;UBERON:0003061,9.64e-10,98;UBERON:0002193,1.17e-08,108;UBERON:0001638,2.31e-08,9;UBERON:0003920,2.31e-08,9;UBERON:0004582,2.31e-08,9;UBERON:0002066,3.56e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0,0.464448369948228,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0.436194716338694,0.377875943688809,0,0.464858073811369,0,0.309706370895104,0.28769239232215,0.768482119587302,0.945928919554341,0,0.645484683583826,0,0.188242339542605,0,0.224723484445085,0,0,0.639337125799041,0.659702600373432,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0.316462387440884,0,0.212604299965044,0.209658645508376,1.68492946719743,1.05123824989054,0.48217676009124,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.445641827540694,0,0,0,0.384273959177026,0.260118695119756,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.97364218096405,2.96020553408754,0.531831842075461,0.238490624305342,0,0,0.198762407366705,0,1.73570250803797,0,1.67799774483962,2.47606237746061,1.04497483268405,0,0.71153252537342,0,0,0,0,0.367663080345869,0.81014194788176,1.7859945656816,1.12264686313085,0.450445921933289,1.53316637465883,0,0.183201743930407,2.63560834872127,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.925971025153221,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.49007023947182,0,5.38740167466846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,6.5968189200182,10.7049208999933,6.83576624608995,14.0556747520096,9.46133228098247,6.48473311192717,3.7802200606668,4.75875105776562,0,0,0,0,0,0,0,0,0.5745161103971,2.54008299268659,0,0.280797178113459,0,0,0,0,0.481764225311099,0.201799707191048,0,0,0,0,0,0,0,0,0.811367035427949,0,0,0,0.293016358543788,0,0,0,0,0,0.614321404198464,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27600463892768,0,0,0,0.31396051279005,0,0,0,0.167821586975843,0,0.476809736941136,0,0,0.282706142867882,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0.913158720509496,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.281951753939561,0.580120991762195,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0.829169439458779,0.103432995861895,0,0,0,0.124149428591716,0,0.0636471582781649,0,0,0,0.134704106029175,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0,0.464448369948228,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0.436194716338694,0.377875943688809,0,0.464858073811369,0,0.309706370895104,0.28769239232215,0.768482119587302,0.945928919554341,0,0.645484683583826,0,0.188242339542605,0,0.224723484445085,0,0,0.639337125799041,0.659702600373432,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0.316462387440884,0,0.212604299965044,0.209658645508376,1.68492946719743,1.05123824989054,0.48217676009124,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.445641827540694,0,0,0,0.384273959177026,0.260118695119756,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.97364218096405,2.96020553408754,0.531831842075461,0.238490624305342,0,0,0.198762407366705,0,1.73570250803797,0,1.67799774483962,2.47606237746061,1.04497483268405,0,0.71153252537342,0,0,0,0,0.367663080345869,0.81014194788176,1.7859945656816,1.12264686313085,0.450445921933289,1.53316637465883,0,0.183201743930407,2.63560834872127,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.925971025153221,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.49007023947182,0,5.38740167466846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,6.5968189200182,10.7049208999933,6.83576624608995,14.0556747520096,9.46133228098247,6.48473311192717,3.7802200606668,4.75875105776562,0,0,0,0,0,0,0,0,0.5745161103971,2.54008299268659,0,0.280797178113459,0,0,0,0,0.481764225311099,0.201799707191048,0,0,0,0,0,0,0,0,0.811367035427949,0,0,0,0.293016358543788,0,0,0,0,0,0.614321404198464,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27600463892768,0,0,0,0.31396051279005,0,0,0,0.167821586975843,0,0.476809736941136,0,0,0.282706142867882,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0.913158720509496,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.281951753939561,0.580120991762195,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0.829169439458779,0.103432995861895,0,0,0,0.124149428591716,0,0.0636471582781649,0,0,0,0.134704106029175,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:118111865..118111877,- | |||
}} | }} |
Latest revision as of 18:43, 23 July 2015
Short description: | p@chr11:118111865..118111877, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:118111865..118111877, - |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 1.74e-20 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.74e-20 | 18 |
granulocyte | 1.97e-16 | 8 |
endothelial cell of vascular tree | 3.44e-15 | 24 |
endothelial cell of artery | 3.69e-14 | 9 |
vein endothelial cell | 2.78e-12 | 6 |
neutrophil | 5.13e-12 | 3 |
blood cell | 5.26e-12 | 11 |
endothelial cell of umbilical vein | 2.19e-11 | 3 |
endothelial cell | 7.01e-10 | 36 |
meso-epithelial cell | 9.41e-08 | 45 |
Ontology term | p-value | n |
---|---|---|
blood | 4.44e-43 | 15 |
haemolymphatic fluid | 4.44e-43 | 15 |
organism substance | 4.44e-43 | 15 |
blood vessel endothelium | 1.74e-20 | 18 |
endothelium | 1.74e-20 | 18 |
cardiovascular system endothelium | 1.74e-20 | 18 |
simple squamous epithelium | 1.23e-16 | 22 |
cardiovascular system | 5.50e-16 | 109 |
circulatory system | 1.76e-15 | 112 |
squamous epithelium | 1.49e-14 | 25 |
endothelial tube | 3.69e-14 | 9 |
arterial system endothelium | 3.69e-14 | 9 |
endothelium of artery | 3.69e-14 | 9 |
lateral plate mesoderm | 8.02e-11 | 203 |
hematopoietic system | 9.64e-10 | 98 |
blood island | 9.64e-10 | 98 |
hemolymphoid system | 1.17e-08 | 108 |
vein | 2.31e-08 | 9 |
venous blood vessel | 2.31e-08 | 9 |
venous system | 2.31e-08 | 9 |
umbilical vein | 3.56e-07 | 5 |