FFCP PHASE1:Hg19::chr11:118082912..118082938,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:118082912..118082938,- to FFCP PHASE1:Hg19::chr11:118082912..118082938,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:118082912..118082938,- | |||
|coexpression_cluster_id=C228 | |||
|description=CAGE_peak_at_chr11:118082912..118082938,- | |||
|id=chr11:118082912..118082938,- | |||
|ontology_enrichment_celltype=CL:0000181!1.77e-11!12;CL:0000417!1.77e-11!12;CL:0000668!1.77e-11!12;CL:0000414!1.77e-11!12;CL:0000412!1.77e-11!12;CL:0000182!1.77e-11!12;CL:0002563!1.01e-09!4;CL:0000223!3.73e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0002563;1.48e-40;4!CL:0002253;3.44e-21;2!CL:0000047;6.30e-21;2!CL:0002231;1.60e-14;3!CL:0000775;1.96e-14;3!CL:0002076;8.76e-10;42!CL:0002251;5.26e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.48e-40,4;CL:0002253,3.11e-21,2;CL:0002231,1.60e-14,3;CL:0000775,2.09e-14,3;CL:0002076,2.45e-09,42;CL:0002251,5.26e-09,20;CL:0000223,5.78e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:178!1.36e-09!1;DOID:326!1.36e-09!1;DOID:3978!1.36e-09!1;DOID:3394!1.36e-09!1;DOID:5844!1.36e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.90e-11!19;UBERON:0006925!5.90e-11!19;UBERON:0008836!5.90e-11!19;UBERON:0001242!1.01e-09!4;UBERON:0001262!1.01e-09!4;UBERON:0004786!1.01e-09!4;UBERON:0004808!1.01e-09!4;UBERON:0001277!1.01e-09!4;UBERON:0002146!1.25e-09!1;UBERON:0005623!1.25e-09!1;UBERON:0008835!1.94e-09!22;UBERON:0003894!1.94e-09!22;UBERON:0003929!4.71e-09!54;UBERON:0009854!5.09e-09!23;UBERON:0007499!2.78e-08!25;UBERON:0009497!2.78e-08!25;UBERON:0000015!2.78e-08!25;UBERON:0002423!2.78e-08!25;UBERON:0006235!2.78e-08!25;UBERON:0004161!2.78e-08!25;UBERON:0005057!5.88e-08!26;UBERON:0009856!5.88e-08!26;UBERON:0003350!6.08e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;1.48e-40;4!UBERON:0001262;1.48e-40;4!UBERON:0004786;1.48e-40;4!UBERON:0004808;1.48e-40;4!UBERON:0001277;1.48e-40;4!UBERON:0000485;1.02e-23;7!UBERON:0003929;1.02e-23;7!UBERON:0003350;6.64e-21;8!UBERON:0001052;2.66e-11;4!UBERON:0000160;6.79e-10;17!UBERON:0004907;2.63e-09;5!UBERON:0000344;5.26e-09;20!UBERON:0005409;5.87e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.48e-40,4;UBERON:0001262,1.48e-40,4;UBERON:0004786,1.48e-40,4;UBERON:0004808,1.48e-40,4;UBERON:0001277,1.48e-40,4;UBERON:0003350,6.64e-21,8;UBERON:0000485,1.03e-18,9;UBERON:0001052,2.53e-11,4;UBERON:0000160,6.79e-10,17;UBERON:0001046,2.08e-09,19;UBERON:0004907,2.53e-09,5;UBERON:0000344,5.26e-09,20;UBERON:0003929,1.99e-07,54;UBERON:0005409,3.78e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,6.14942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0.637938751653163,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98836183652353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.78494742882916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0.393915911536118,0.412079291905832,0.471824806979294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,6.14942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0.637938751653163,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98836183652353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.78494742882916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0.393915911536118,0.412079291905832,0.471824806979294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:118082912..118082938,- | |||
}} | }} |
Latest revision as of 18:43, 23 July 2015
Short description: | p@chr11:118082912..118082938, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:118082912..118082938, - |
Coexpression cluster: | C228_colon_Intestinal_Prostate_hepatoblastoma_hepatocellular_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.48e-40 | 4 |
epithelial cell of large intestine | 3.11e-21 | 2 |
epithelial cell of prostate | 1.60e-14 | 3 |
neutrophil | 2.09e-14 | 3 |
endo-epithelial cell | 2.45e-09 | 42 |
epithelial cell of alimentary canal | 5.26e-09 | 20 |
endodermal cell | 5.78e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.48e-40 | 4 |
wall of intestine | 1.48e-40 | 4 |
gastrointestinal system mucosa | 1.48e-40 | 4 |
gastrointestinal system epithelium | 1.48e-40 | 4 |
intestinal epithelium | 1.48e-40 | 4 |
epithelium of mucosa | 6.64e-21 | 8 |
simple columnar epithelium | 1.03e-18 | 9 |
rectum | 2.53e-11 | 4 |
intestine | 6.79e-10 | 17 |
hindgut | 2.08e-09 | 19 |
lower digestive tract | 2.53e-09 | 5 |
mucosa | 5.26e-09 | 20 |
gut epithelium | 1.99e-07 | 54 |
gastrointestinal system | 3.78e-07 | 25 |