FFCP PHASE1:Hg19::chr11:116700720..116700741,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:116700720..116700741,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_at_chr11:116700720..116700741,+ | |description=CAGE_peak_at_chr11:116700720..116700741,+ | ||
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|ontology_enrichment_celltype=CL:0000181!6.70e-20!12;CL:0000417!6.70e-20!12;CL:0000668!6.70e-20!12;CL:0000414!6.70e-20!12;CL:0000412!6.70e-20!12;CL:0000182!6.70e-20!12;CL:0002563!1.86e-10!4;CL:0000223!2.31e-09!59 | |ontology_enrichment_celltype=CL:0000181!6.70e-20!12;CL:0000417!6.70e-20!12;CL:0000668!6.70e-20!12;CL:0000414!6.70e-20!12;CL:0000412!6.70e-20!12;CL:0000182!6.70e-20!12;CL:0002563!1.86e-10!4;CL:0000223!2.31e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.77e-09;12!CL:0002563;1.98e-07;4 | |ontology_enrichment_celltype_v019=CL:0000182;2.77e-09;12!CL:0002563;1.98e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.77e-09,12;CL:0002563,1.92e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.83e-10;11!UBERON:0009497;1.22e-08;13 | |ontology_enrichment_development_v019=UBERON:0004161;4.83e-10;11!UBERON:0009497;1.22e-08;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;2.32e-21;19!UBERON:0006925;2.32e-21;19!UBERON:0002423;2.29e-16;25!UBERON:0002365;3.63e-13;31!UBERON:0002330;3.63e-13;31!UBERON:0002368;4.28e-11;33!UBERON:0000949;4.39e-08;43!UBERON:0001242;1.98e-07;4!UBERON:0001262;1.98e-07;4!UBERON:0004786;1.98e-07;4!UBERON:0004808;1.98e-07;4!UBERON:0001277;1.98e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0002107;2.32e-21;19!UBERON:0006925;2.32e-21;19!UBERON:0002423;2.29e-16;25!UBERON:0002365;3.63e-13;31!UBERON:0002330;3.63e-13;31!UBERON:0002368;4.28e-11;33!UBERON:0000949;4.39e-08;43!UBERON:0001242;1.98e-07;4!UBERON:0001262;1.98e-07;4!UBERON:0004786;1.98e-07;4!UBERON:0004808;1.98e-07;4!UBERON:0001277;1.98e-07;4 | ||
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|short_description=p@chr11:116700720..116700741,+ | |short_description=p@chr11:116700720..116700741,+ | ||
}} | }} |
Latest revision as of 18:28, 23 July 2015
Short description: | p@chr11:116700720..116700741, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:116700720..116700741, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.77e-09 | 12 |
intestinal epithelial cell | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
liver | 2.32e-21 | 19 |
digestive gland | 2.32e-21 | 19 |
liver bud | 2.32e-21 | 19 |
hepatic diverticulum | 1.59e-18 | 22 |
liver primordium | 1.59e-18 | 22 |
digestive tract diverticulum | 9.62e-18 | 23 |
epithelial sac | 2.29e-16 | 25 |
epithelium of foregut-midgut junction | 2.29e-16 | 25 |
anatomical boundary | 2.29e-16 | 25 |
hepatobiliary system | 2.29e-16 | 25 |
foregut-midgut junction | 2.29e-16 | 25 |
septum transversum | 2.29e-16 | 25 |
sac | 9.32e-16 | 26 |
exocrine gland | 2.70e-13 | 31 |
exocrine system | 2.70e-13 | 31 |
endocrine gland | 7.91e-12 | 35 |
gut epithelium | 9.64e-12 | 54 |
endocrine system | 2.71e-09 | 45 |
abdomen element | 8.31e-08 | 54 |
abdominal segment element | 8.31e-08 | 54 |
endo-epithelium | 8.43e-08 | 82 |
intestinal mucosa | 1.92e-07 | 4 |
wall of intestine | 1.92e-07 | 4 |
gastrointestinal system mucosa | 1.92e-07 | 4 |
gastrointestinal system epithelium | 1.92e-07 | 4 |
intestinal epithelium | 1.92e-07 | 4 |
gland | 3.56e-07 | 59 |
abdominal segment of trunk | 4.63e-07 | 60 |
abdomen | 4.63e-07 | 60 |