FFCP PHASE1:Hg19::chr11:108743594..108743616,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:108743594..108743616,+ | |||
|coexpression_cluster_id=C2092 | |coexpression_cluster_id=C2092 | ||
|description=CAGE_peak_at_chr11:108743594..108743616,+ | |description=CAGE_peak_at_chr11:108743594..108743616,+ | ||
|id=chr11:108743594..108743616,+ | |id=chr11:108743594..108743616,+ | ||
|ontology_enrichment_celltype=CL:0002144;4.05e-85;3!CL:0002139;9.71e-30;24!CL:0000071;1.19e-25;18!CL:0000115;5.58e-13;36!CL:0002078;1.31e-12;45!CL:0002618;9.90e-11;3!CL:0000213;8.63e-09;58!CL:0000215;8.63e-09;58!CL:0002537;6.04e-07;5 | |ontology_enrichment_celltype=CL:0002139!8.11e-27!24;CL:0000071!2.09e-18!18;CL:0002546!2.09e-18!18;CL:0000115!2.84e-17!35;CL:0002078!4.94e-13!44;CL:0002144!3.09e-12!3;CL:0002618!2.35e-11!3;CL:0005020!3.37e-10!6;CL:0002138!3.37e-10!6;CL:0005022!3.37e-10!6;CL:0000213!2.66e-09!57;CL:0000215!2.66e-09!57 | ||
| | |ontology_enrichment_celltype_v019=CL:0002144;4.05e-85;3!CL:0002139;9.71e-30;24!CL:0000071;1.19e-25;18!CL:0000115;5.58e-13;36!CL:0002078;1.31e-12;45!CL:0002618;9.90e-11;3!CL:0000213;8.63e-09;58!CL:0000215;8.63e-09;58!CL:0002537;6.04e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002144,3.04e-85,3;CL:0002139,8.62e-30,24;CL:0000071,1.19e-25,18;CL:0002546,1.19e-25,18;CL:0000115,4.97e-20,36;CL:0002078,4.12e-16,45;CL:0000213,1.38e-12,58;CL:0000215,1.38e-12,58;CL:0002618,1.09e-10,3;CL:0000076,1.07e-07,63;CL:0002537,6.77e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;1.19e-25;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0010523;4.05e-85;3!UBERON:0001915;4.05e-85;3!UBERON:0001982;4.05e-85;3!UBERON:0007195;2.37e-29;1!UBERON:0004638;1.19e-25;18!UBERON:0001986;1.19e-25;18!UBERON:0004852;1.19e-25;18!UBERON:0000487;4.16e-21;22!UBERON:0006914;1.19e-18;25!UBERON:0000490;4.44e-13;33!UBERON:0000055;1.05e-10;65!UBERON:0007500;7.08e-08;56!UBERON:0001981;7.08e-08;56!UBERON:0004537;7.08e-08;56!UBERON:0002066;6.04e-07;5 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.09e-18!18;UBERON:0004638!2.09e-18!18;UBERON:0004852!2.09e-18!18;UBERON:0000487!1.16e-14!22;UBERON:0002049!1.93e-14!79;UBERON:0007798!1.93e-14!79;UBERON:0004535!1.43e-13!110;UBERON:0001009!4.82e-13!113;UBERON:0006914!1.21e-12!25;UBERON:0000055!2.59e-12!69;UBERON:0001915!3.09e-12!3;UBERON:0001982!3.09e-12!3;UBERON:0004872!3.25e-10!84;UBERON:0001981!2.48e-08!60;UBERON:0007500!2.48e-08!60;UBERON:0004537!2.48e-08!60;UBERON:0006965!2.48e-08!60;UBERON:0001473!1.23e-07!8;UBERON:0004536!1.23e-07!8;UBERON:0006558!1.23e-07!8;UBERON:0002066!5.82e-07!5;UBERON:0003914!6.61e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;4.05e-85;3!UBERON:0001915;4.05e-85;3!UBERON:0001982;4.05e-85;3!UBERON:0007195;2.37e-29;1!UBERON:0004638;1.19e-25;18!UBERON:0001986;1.19e-25;18!UBERON:0004852;1.19e-25;18!UBERON:0000487;4.16e-21;22!UBERON:0006914;1.19e-18;25!UBERON:0000490;4.44e-13;33!UBERON:0000055;1.05e-10;65!UBERON:0007500;7.08e-08;56!UBERON:0001981;7.08e-08;56!UBERON:0004537;7.08e-08;56!UBERON:0002066;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,3.04e-85,3;UBERON:0001915,3.04e-85,3;UBERON:0001982,3.04e-85,3;UBERON:0007195,2.37e-29,1;UBERON:0004638,1.19e-25,18;UBERON:0001986,1.19e-25,18;UBERON:0004852,1.19e-25,18;UBERON:0000487,4.16e-21,22;UBERON:0006914,1.19e-18,25;UBERON:0000055,8.75e-11,68;UBERON:0002049,1.93e-09,78;UBERON:0007798,1.93e-09,78;UBERON:0007500,3.43e-08,59;UBERON:0001981,3.43e-08,59;UBERON:0004537,3.43e-08,59;UBERON:0006965,3.43e-08,59;UBERON:0002066,6.39e-07,5;UBERON:0004535,8.01e-07,109 | |||
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| ||
|short_description=p@chr11:108743594..108743616,+ | |short_description=p@chr11:108743594..108743616,+ | ||
}} | }} |
Latest revision as of 17:55, 23 July 2015
Short description: | p@chr11:108743594..108743616, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:108743594..108743616, + |
Coexpression cluster: | C2092_splenic_Endothelial_Lymphatic_adenocarcinoma_Renal_small_lymphangiectasia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 3.04e-85 | 3 |
endothelial cell of vascular tree | 8.62e-30 | 24 |
blood vessel endothelial cell | 1.19e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.19e-25 | 18 |
endothelial cell | 4.97e-20 | 36 |
meso-epithelial cell | 4.12e-16 | 45 |
lining cell | 1.38e-12 | 58 |
barrier cell | 1.38e-12 | 58 |
endothelial cell of umbilical vein | 1.09e-10 | 3 |
squamous epithelial cell | 1.07e-07 | 63 |
amnion mesenchymal stem cell | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 3.04e-85 | 3 |
endothelium of capillary | 3.04e-85 | 3 |
capillary | 3.04e-85 | 3 |
stroma of bone marrow | 2.37e-29 | 1 |
blood vessel endothelium | 1.19e-25 | 18 |
endothelium | 1.19e-25 | 18 |
cardiovascular system endothelium | 1.19e-25 | 18 |
simple squamous epithelium | 4.16e-21 | 22 |
squamous epithelium | 1.19e-18 | 25 |
vessel | 8.75e-11 | 68 |
vasculature | 1.93e-09 | 78 |
vascular system | 1.93e-09 | 78 |
epithelial tube open at both ends | 3.43e-08 | 59 |
blood vessel | 3.43e-08 | 59 |
blood vasculature | 3.43e-08 | 59 |
vascular cord | 3.43e-08 | 59 |
umbilical vein | 6.39e-07 | 5 |
cardiovascular system | 8.01e-07 | 109 |