FFCP PHASE1:Hg19::chr10:99475033..99475035,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:99475033..99475035,- to FFCP PHASE1:Hg19::chr10:99475033..99475035,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:99475033..99475035,- | |||
|description=CAGE_peak_at_chr10:99475033..99475035,- | |||
|id=chr10:99475033..99475035,- | |||
|ontology_enrichment_celltype=CL:0000055!6.52e-14!180;CL:0000548!1.50e-10!679;CL:0000004!1.50e-10!679;CL:0000255!1.50e-10!679;CL:0000012!3.44e-10!682;CL:0000057!6.54e-09!75;CL:0002371!7.78e-08!591;CL:0000144!8.19e-08!625 | |||
|ontology_enrichment_celltype_v019=CL:0000135;3.32e-18;3!CL:0000388;3.32e-18;3!CL:0002577;3.95e-18;3!CL:0000148;4.29e-14;10!CL:0000710;4.19e-13;20!CL:0000147;5.23e-10;14!CL:0000075;1.75e-09;27!CL:0002077;3.05e-09;34!CL:0000349;1.64e-07;19!CL:0000499;5.72e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,9.74e-19,3;CL:0000388,9.74e-19,3;CL:0002577,2.36e-18,3;CL:0000148,8.76e-14,10;CL:0000541,8.76e-14,10;CL:0000710,6.12e-13,20;CL:0000147,8.61e-10,14;CL:0002077,1.83e-09,34;CL:0000075,2.30e-09,27;CL:0000349,1.26e-07,19;CL:0000499,4.24e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;4.97e-07;1!DOID:3149;4.97e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,3.82e-07,1;DOID:3149,3.82e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;3.32e-18;3!UBERON:0000043;3.32e-18;3!UBERON:0007845;3.32e-18;3!UBERON:0001987;9.80e-14;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,9.74e-19,3;UBERON:0000043,9.74e-19,3;UBERON:0007845,9.74e-19,3;UBERON:0001987,6.68e-14,4;UBERON:0004340,6.68e-14,4;UBERON:0003124,7.81e-14,7;UBERON:0005631,5.90e-07,14;UBERON:0000158,5.90e-07,14 | |||
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| ||
|short_description=p@chr10:99475033..99475035,- | |||
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Latest revision as of 17:17, 23 July 2015
Short description: | p@chr10:99475033..99475035, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:99475033..99475035, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 9.74e-19 | 3 |
tendon cell | 9.74e-19 | 3 |
placental epithelial cell | 2.36e-18 | 3 |
melanocyte | 8.76e-14 | 10 |
melanoblast | 8.76e-14 | 10 |
neurecto-epithelial cell | 6.12e-13 | 20 |
pigment cell | 8.61e-10 | 14 |
ecto-epithelial cell | 1.83e-09 | 34 |
columnar/cuboidal epithelial cell | 2.30e-09 | 27 |
extraembryonic cell | 1.26e-07 | 19 |
stromal cell | 4.24e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 9.74e-19 | 3 |
tendon | 9.74e-19 | 3 |
regular connective tissue | 9.74e-19 | 3 |
placenta | 6.68e-14 | 4 |
allantois | 6.68e-14 | 4 |
chorion | 7.81e-14 | 7 |
extraembryonic membrane | 5.90e-07 | 14 |
membranous layer | 5.90e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.82e-07 | 1 |
keratoacanthoma | 3.82e-07 | 1 |