FFCP PHASE1:Hg19::chr10:98497290..98497306,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:98497290..98497306,+ | |||
|description=CAGE_peak_at_chr10:98497290..98497306,+ | |description=CAGE_peak_at_chr10:98497290..98497306,+ | ||
|id=chr10:98497290..98497306,+ | |id=chr10:98497290..98497306,+ | ||
|ontology_enrichment_celltype=CL:0000945!2.75e-27!24;CL:0000826!2.75e-27!24;CL:0000037!1.73e-26!172;CL:0000566!1.73e-26!172;CL:0000988!4.17e-24!182;CL:0002032!2.77e-22!165;CL:0000837!2.77e-22!165;CL:0000236!5.30e-20!14;CL:0000738!8.76e-16!140;CL:0002087!6.76e-13!119;CL:0000542!1.26e-11!53;CL:0000051!1.26e-11!53;CL:0002322!2.06e-11!5;CL:0000763!3.25e-11!112;CL:0000049!3.25e-11!112;CL:0000838!1.12e-10!52;CL:0002031!1.36e-09!124;CL:0000784!8.44e-08!3 | |ontology_enrichment_celltype=CL:0000945!2.75e-27!24;CL:0000826!2.75e-27!24;CL:0000037!1.73e-26!172;CL:0000566!1.73e-26!172;CL:0000988!4.17e-24!182;CL:0002032!2.77e-22!165;CL:0000837!2.77e-22!165;CL:0000236!5.30e-20!14;CL:0000738!8.76e-16!140;CL:0002087!6.76e-13!119;CL:0000542!1.26e-11!53;CL:0000051!1.26e-11!53;CL:0002322!2.06e-11!5;CL:0000763!3.25e-11!112;CL:0000049!3.25e-11!112;CL:0000838!1.12e-10!52;CL:0002031!1.36e-09!124;CL:0000784!8.44e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.07e-40;24!CL:0000236;2.59e-32;13!CL:0002322;2.24e-19;5!CL:0000542;6.33e-13;53!CL:0000784;7.23e-13;3!CL:0000039;1.35e-09;7!CL:0000586;1.35e-09;7 | |ontology_enrichment_celltype_v019=CL:0000945;1.07e-40;24!CL:0000236;2.59e-32;13!CL:0002322;2.24e-19;5!CL:0000542;6.33e-13;53!CL:0000784;7.23e-13;3!CL:0000039;1.35e-09;7!CL:0000586;1.35e-09;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.22e-40,24;CL:0000826,1.22e-40,24;CL:0000236,9.79e-36,14;CL:0000037,3.74e-21,168;CL:0000988,1.23e-19,177;CL:0002322,2.09e-19,5;CL:0000542,3.84e-18,53;CL:0000051,3.84e-18,53;CL:0002032,4.95e-18,161;CL:0000837,4.95e-18,161;CL:0000838,1.73e-16,52;CL:0000784,7.24e-13,3;CL:0000738,9.11e-12,136;CL:0000039,1.32e-09,7;CL:0000586,1.32e-09,7;CL:0002087,7.20e-09,115;CL:0002031,2.11e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;6.33e-13;53!UBERON:0004872;2.19e-08;7 | |ontology_enrichment_development_v019=CL:0000051;6.33e-13;53!UBERON:0004872;2.19e-08;7 | ||
|ontology_enrichment_disease=DOID:1240!3.93e-12!39;DOID:2531!6.01e-12!51;DOID:0060083!6.01e-12!51;DOID:8692!4.11e-11!31 | |ontology_enrichment_disease=DOID:1240!3.93e-12!39;DOID:2531!6.01e-12!51;DOID:0060083!6.01e-12!51;DOID:8692!4.11e-11!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.02e-09;31!DOID:1240;1.08e-09;39!DOID:2531;5.15e-09;51!DOID:0060083;5.15e-09;51 | |ontology_enrichment_disease_v019=DOID:8692;1.02e-09;31!DOID:1240;1.08e-09;39!DOID:2531;5.15e-09;51!DOID:0060083;5.15e-09;51 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,7.93e-13,51;DOID:0060083,7.93e-13,51;DOID:1240,3.85e-11,39;DOID:8692,4.40e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0002106!4.51e-07!3;UBERON:0004854!4.51e-07!3;UBERON:0009034!4.51e-07!3;UBERON:0002095!4.51e-07!3;UBERON:0004782!4.51e-07!3;UBERON:0003281!4.51e-07!3;UBERON:0009664!4.51e-07!3;UBERON:0002296!4.51e-07!3;UBERON:0005602!4.51e-07!3;UBERON:0001179!4.51e-07!3;UBERON:0006293!4.51e-07!3;UBERON:0002193!7.16e-07!112;UBERON:0004177!7.25e-07!7 | |ontology_enrichment_uberon=UBERON:0002106!4.51e-07!3;UBERON:0004854!4.51e-07!3;UBERON:0009034!4.51e-07!3;UBERON:0002095!4.51e-07!3;UBERON:0004782!4.51e-07!3;UBERON:0003281!4.51e-07!3;UBERON:0009664!4.51e-07!3;UBERON:0002296!4.51e-07!3;UBERON:0005602!4.51e-07!3;UBERON:0001179!4.51e-07!3;UBERON:0006293!4.51e-07!3;UBERON:0002193!7.16e-07!112;UBERON:0004177!7.25e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.51e-11;3!UBERON:0000473;2.16e-08;8!UBERON:0004177;4.26e-07;5!UBERON:0005057;4.26e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002106;1.51e-11;3!UBERON:0000473;2.16e-08;8!UBERON:0004177;4.26e-07;5!UBERON:0005057;4.26e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.49e-11,3;UBERON:0004854,1.49e-11,3;UBERON:0009034,1.49e-11,3;UBERON:0002095,1.49e-11,3;UBERON:0004782,1.49e-11,3;UBERON:0003281,1.49e-11,3;UBERON:0009664,1.49e-11,3;UBERON:0002296,1.49e-11,3;UBERON:0005602,1.49e-11,3;UBERON:0001179,1.49e-11,3;UBERON:0006293,1.49e-11,3;UBERON:0000473,2.12e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90370941842215,3.11982239909794,2.36132343941038,0,0.767658796194425,0.309632246632152,0,0,0,2.16908161624845,3.9807385096478,1.46800219667424,0,0.601633342410425,0.217010870715852,0,0,0,0,0,0.485168122375632,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0.211255286311942,0,0,0,0.150176892841506,0,0,0,0.182664153764634,3.51992488922645,2.18455444504853,2.66852776159066,2.13365111283254,1.20118796110804,2.87376219977242,0,3.81621501814146,2.84606484554724,2.34894875748376,3.44045905312706,1.32171328579026,0.560508562981536,0.790152254325231,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,9.30113434790834,18.8758320557442,14.486842551853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31842236777572,2.78312513475119,4.06678800043314,7.56725701612204,4.54177531576131,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8720341211139,1.63494278517601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0,0.476463550915578,0.822724546172388,0,0.540031437238115,0,0,0,0,1.30062222588003,10.387383334304,0,0,3.19326994292507,5.93666647410337,2.54008299268659,3.24621940274555,21.9021798928498,0.228234679033192,1.41011906195721,10.0253790836027,1.52362600021443,0,0,0,0.343505344755765,0,0,0,0.390776190804081,0,3.69262196843137,1.08182271390393,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664846727600626,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482259445395058,0.412618309791701,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,1.9846640872478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.99216735290052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.75935671919414,1.61144719933943,2.09876427442351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5489309234982,0,10.8108159526501,22.1790446370415,19.3898238018523,27.3271217828689,0,0,0,0,0.213233981900981,0,0.193766729508018,0.248298857183432,0.112131862580613,0,0,0.217716747896961,0,1.48174516632093,0.0717222053926763,0,0,0,0,0,0,0,0,0,1.20764276154616,0.641136984606466 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90370941842215,3.11982239909794,2.36132343941038,0,0.767658796194425,0.309632246632152,0,0,0,2.16908161624845,3.9807385096478,1.46800219667424,0,0.601633342410425,0.217010870715852,0,0,0,0,0,0.485168122375632,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0.211255286311942,0,0,0,0.150176892841506,0,0,0,0.182664153764634,3.51992488922645,2.18455444504853,2.66852776159066,2.13365111283254,1.20118796110804,2.87376219977242,0,3.81621501814146,2.84606484554724,2.34894875748376,3.44045905312706,1.32171328579026,0.560508562981536,0.790152254325231,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,9.30113434790834,18.8758320557442,14.486842551853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31842236777572,2.78312513475119,4.06678800043314,7.56725701612204,4.54177531576131,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8720341211139,1.63494278517601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0,0.476463550915578,0.822724546172388,0,0.540031437238115,0,0,0,0,1.30062222588003,10.387383334304,0,0,3.19326994292507,5.93666647410337,2.54008299268659,3.24621940274555,21.9021798928498,0.228234679033192,1.41011906195721,10.0253790836027,1.52362600021443,0,0,0,0.343505344755765,0,0,0,0.390776190804081,0,3.69262196843137,1.08182271390393,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664846727600626,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482259445395058,0.412618309791701,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,1.9846640872478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.99216735290052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.75935671919414,1.61144719933943,2.09876427442351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5489309234982,0,10.8108159526501,22.1790446370415,19.3898238018523,27.3271217828689,0,0,0,0,0.213233981900981,0,0.193766729508018,0.248298857183432,0.112131862580613,0,0,0.217716747896961,0,1.48174516632093,0.0717222053926763,0,0,0,0,0,0,0,0,0,1.20764276154616,0.641136984606466 | ||
|short_description=p@chr10:98497290..98497306,+ | |short_description=p@chr10:98497290..98497306,+ | ||
}} | }} |
Latest revision as of 17:11, 23 July 2015
Short description: | p@chr10:98497290..98497306, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:98497290..98497306, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.22e-40 | 24 |
pro-B cell | 1.22e-40 | 24 |
B cell | 9.79e-36 | 14 |
hematopoietic stem cell | 3.74e-21 | 168 |
hematopoietic cell | 1.23e-19 | 177 |
embryonic stem cell | 2.09e-19 | 5 |
lymphocyte | 3.84e-18 | 53 |
common lymphoid progenitor | 3.84e-18 | 53 |
hematopoietic oligopotent progenitor cell | 4.95e-18 | 161 |
hematopoietic multipotent progenitor cell | 4.95e-18 | 161 |
lymphoid lineage restricted progenitor cell | 1.73e-16 | 52 |
plasmacytoid dendritic cell | 7.24e-13 | 3 |
leukocyte | 9.11e-12 | 136 |
germ line cell | 1.32e-09 | 7 |
germ cell | 1.32e-09 | 7 |
nongranular leukocyte | 7.20e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 2.11e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.49e-11 | 3 |
gastrointestinal system mesentery | 1.49e-11 | 3 |
stomach region | 1.49e-11 | 3 |
mesentery | 1.49e-11 | 3 |
gastrointestinal system serosa | 1.49e-11 | 3 |
mesentery of stomach | 1.49e-11 | 3 |
gut mesentery | 1.49e-11 | 3 |
dorsal mesentery | 1.49e-11 | 3 |
dorsal mesogastrium | 1.49e-11 | 3 |
peritoneal cavity | 1.49e-11 | 3 |
spleen primordium | 1.49e-11 | 3 |
testis | 2.12e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.93e-13 | 51 |
immune system cancer | 7.93e-13 | 51 |
leukemia | 3.85e-11 | 39 |
myeloid leukemia | 4.40e-10 | 31 |