FFCP PHASE1:Hg19::chr10:98497275..98497286,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:98497275..98497286,+
|short_description=p@chr10:98497275..98497286,+
|description=CAGE_peak_at_chr10:98497275..98497286,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:98497275..98497286,+ | |||
|coexpression_cluster_id=C157 | |||
|description=CAGE_peak_at_chr10:98497275..98497286,+ | |||
|id=chr10:98497275..98497286,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.35e-21!5;CL:0000945!3.80e-18!24;CL:0000826!3.80e-18!24;CL:0000784!1.36e-13!3;CL:0000037!1.35e-10!172;CL:0000566!1.35e-10!172;CL:0000039!2.06e-10!7;CL:0000586!2.06e-10!7;CL:0000236!2.27e-10!14;CL:0000988!1.11e-09!182;CL:0002032!3.53e-09!165;CL:0000837!3.53e-09!165;CL:0000542!2.06e-08!53;CL:0000051!2.06e-08!53;CL:0000738!1.15e-07!140;CL:0000838!3.39e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.09e-33;7!CL:0000586;4.09e-33;7!CL:0000784;7.87e-20;3!CL:0000817;1.15e-15;1!CL:0002032;2.38e-15;1!CL:0000557;2.38e-15;1!CL:0002322;2.67e-12;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.62e-33,7;CL:0000586,3.62e-33,7;CL:0000784,9.53e-20,3;CL:0002322,2.82e-12,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.58e-23;10!UBERON:0005564;2.58e-23;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;2.20e-16;22!DOID:2994;2.20e-16;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.06e-16,22;DOID:2994,2.06e-16,22 | |||
|ontology_enrichment_uberon=UBERON:0002106!2.11e-12!3;UBERON:0004854!2.11e-12!3;UBERON:0009034!2.11e-12!3;UBERON:0002095!2.11e-12!3;UBERON:0004782!2.11e-12!3;UBERON:0003281!2.11e-12!3;UBERON:0009664!2.11e-12!3;UBERON:0002296!2.11e-12!3;UBERON:0005602!2.11e-12!3;UBERON:0001179!2.11e-12!3;UBERON:0006293!2.11e-12!3;UBERON:0004177!3.75e-09!7;UBERON:0000473!4.14e-09!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.92e-29;8!UBERON:0003135;3.13e-21;11!UBERON:0000991;2.83e-11;21!UBERON:0003101;8.94e-11;22!UBERON:0000079;8.94e-11;22!UBERON:0000922;8.56e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.42e-29,8;UBERON:0003135,2.89e-21,11;UBERON:0000991,2.71e-11,21;UBERON:0009196,2.71e-11,21;UBERON:0009117,2.71e-11,21;UBERON:0005564,2.71e-11,21;UBERON:0004176,8.61e-11,22;UBERON:0003101,8.61e-11,22;UBERON:0000079,8.61e-11,22 | |||
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| ||
|short_description=p@chr10:98497275..98497286,+ | |||
}} | }} |
Latest revision as of 17:11, 23 July 2015
Short description: | p@chr10:98497275..98497286, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:98497275..98497286, + |
Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.62e-33 | 7 |
germ cell | 3.62e-33 | 7 |
plasmacytoid dendritic cell | 9.53e-20 | 3 |
embryonic stem cell | 2.82e-12 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 4.42e-29 | 8 |
male reproductive organ | 2.89e-21 | 11 |
gonad | 2.71e-11 | 21 |
indifferent external genitalia | 2.71e-11 | 21 |
indifferent gonad | 2.71e-11 | 21 |
gonad primordium | 2.71e-11 | 21 |
external genitalia | 8.61e-11 | 22 |
male organism | 8.61e-11 | 22 |
male reproductive system | 8.61e-11 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.06e-16 | 22 |
germ cell cancer | 2.06e-16 | 22 |