FFCP PHASE1:Hg19::chr10:95360222..95360277,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:95360222..95360277,- to FFCP PHASE1:Hg19::chr10:95360222..95360277,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:95360222..95360277,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr10:95360222..95360277,- | |||
|id=chr10:95360222..95360277,- | |||
|ontology_enrichment_celltype=CL:0000136!3.43e-18!15;CL:0000181!3.80e-09!12;CL:0000417!3.80e-09!12;CL:0000668!3.80e-09!12;CL:0000414!3.80e-09!12;CL:0000412!3.80e-09!12;CL:0000182!3.80e-09!12;CL:0002521!2.57e-08!3;CL:0002615!9.28e-08!3;CL:0000135!1.79e-07!3;CL:0000386!1.79e-07!3;CL:0000388!1.79e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.39e-48;13!CL:0002521;5.35e-20;3!CL:0000182;4.50e-19;12!CL:0002615;2.21e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,7.72e-42,15;CL:0002521,4.40e-20,3;CL:0000182,4.44e-19,12;CL:0002615,2.73e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.37e-14;11!UBERON:0009497;2.56e-12;13!UBERON:0003104;4.75e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.46e-20!115;UBERON:0002107!5.36e-09!19;UBERON:0006925!5.36e-09!19;UBERON:0008836!5.36e-09!19;UBERON:0009854!9.07e-09!23;UBERON:0002368!2.07e-08!35;UBERON:0002190!2.57e-08!3;UBERON:0000949!5.36e-08!45;UBERON:0009497!8.91e-08!25;UBERON:0000015!8.91e-08!25;UBERON:0002423!8.91e-08!25;UBERON:0006235!8.91e-08!25;UBERON:0004161!8.91e-08!25;UBERON:0008835!1.67e-07!22;UBERON:0003894!1.67e-07!22;UBERON:0009856!1.70e-07!26;UBERON:0000043!1.79e-07!3;UBERON:0004905!2.06e-07!5;UBERON:0000982!2.06e-07!5;UBERON:0004770!2.06e-07!5;UBERON:0005057!2.65e-07!26;UBERON:0002530!4.91e-07!59;UBERON:0002417!8.14e-07!61;UBERON:0000916!8.14e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.23e-21;19!UBERON:0006925;4.23e-21;19!UBERON:0002190;5.35e-20;3!UBERON:0002423;9.22e-16;25!UBERON:0002368;4.27e-13;33!UBERON:0002072;3.16e-12;5!UBERON:0002365;4.66e-12;31!UBERON:0002330;4.66e-12;31!UBERON:0000949;4.70e-09;43!UBERON:0002426;7.45e-08;1!UBERON:0003831;7.45e-08;1!UBERON:0003898;7.45e-08;1!UBERON:0004830;7.45e-08;1!UBERON:0003830;7.45e-08;1!UBERON:0005175;7.45e-08;1!UBERON:0001774;7.45e-08;1!UBERON:0001103;7.45e-08;1!UBERON:0001013;1.41e-07;14!UBERON:0007029;1.49e-07;1!UBERON:0004457;6.89e-07;9!UBERON:0000042;6.89e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.18e-21,19;UBERON:0006925,4.18e-21,19;UBERON:0008836,4.18e-21,19;UBERON:0002190,4.40e-20,3;UBERON:0008835,4.51e-18,22;UBERON:0003894,4.51e-18,22;UBERON:0009854,3.09e-17,23;UBERON:0007499,9.13e-16,25;UBERON:0009497,9.13e-16,25;UBERON:0000015,9.13e-16,25;UBERON:0002423,9.13e-16,25;UBERON:0006235,9.13e-16,25;UBERON:0004161,9.13e-16,25;UBERON:0009856,4.09e-15,26;UBERON:0002368,8.53e-14,35;UBERON:0002365,1.72e-12,31;UBERON:0002330,1.72e-12,31;UBERON:0002072,2.82e-12,5;UBERON:0000949,2.08e-10,45;UBERON:0002417,3.80e-09,60;UBERON:0000916,3.80e-09,60;UBERON:0003929,2.17e-08,54;UBERON:0002426,7.45e-08,1;UBERON:0003831,7.45e-08,1;UBERON:0003898,7.45e-08,1;UBERON:0004830,7.45e-08,1;UBERON:0003830,7.45e-08,1;UBERON:0005175,7.45e-08,1;UBERON:0001774,7.45e-08,1;UBERON:0001103,7.45e-08,1;UBERON:0010084,7.45e-08,1;UBERON:0007029,1.18e-07,1;UBERON:0001013,1.32e-07,14;UBERON:0002530,1.35e-07,59 | |||
|phase1_expression=0,7.49351833618441,0.422863212287913,1.0007329835313,2.23480547213644,0,7.59899634504932,1.89515962028049,4.70134130759709,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,51.9695642769506,25.5535076336183,17.7236972004421,0,1.72183813960359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6740444326698,0.0915694648183434,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9555068941673,0.658589785919804,0,0,0,0,0,11.956262698651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51619630252546,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.353830258013357,0.611030144933625,0,0,0,0.067401132980677,3.21031058919516,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687481272035051,0,0.399358000997982,0,0.223171457441873,0.0671834724867263,0,0,1.81201319306614,1.31865373409866,1.81989568406299,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.551639951094387,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,31.2156257734316,26.5013777824443,0,0.13223260174269,0,0,0.427149650270779,0,0.828478110694391,0,0,0,0,19.5846409213011,13.0358744891804,22.6695726804962,18.360867319749,0,0,0.488105059607853,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,3.03482802118316,0.455324382702595,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0.223710863595585,0,0,0,0.102662806856247,2.3196288626764,1.94284397223656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,1.0580536810308,0.371995018166751,0.462175628631418,1.29787968637137,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.852935927603924,0,0,0.0620747142958579,0,0.0636471582781649,0,0.870866991587845,0,0,0.358611026963382,0,0,0,0,0.0898252021065869,0,0,0,0,2.01273793591026,0 | |phase1_expression=0,7.49351833618441,0.422863212287913,1.0007329835313,2.23480547213644,0,7.59899634504932,1.89515962028049,4.70134130759709,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,51.9695642769506,25.5535076336183,17.7236972004421,0,1.72183813960359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6740444326698,0.0915694648183434,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9555068941673,0.658589785919804,0,0,0,0,0,11.956262698651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51619630252546,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.353830258013357,0.611030144933625,0,0,0,0.067401132980677,3.21031058919516,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687481272035051,0,0.399358000997982,0,0.223171457441873,0.0671834724867263,0,0,1.81201319306614,1.31865373409866,1.81989568406299,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.551639951094387,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,31.2156257734316,26.5013777824443,0,0.13223260174269,0,0,0.427149650270779,0,0.828478110694391,0,0,0,0,19.5846409213011,13.0358744891804,22.6695726804962,18.360867319749,0,0,0.488105059607853,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,3.03482802118316,0.455324382702595,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0.223710863595585,0,0,0,0.102662806856247,2.3196288626764,1.94284397223656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,1.0580536810308,0.371995018166751,0.462175628631418,1.29787968637137,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.852935927603924,0,0,0.0620747142958579,0,0.0636471582781649,0,0.870866991587845,0,0,0.358611026963382,0,0,0,0,0.0898252021065869,0,0,0,0,2.01273793591026,0 | ||
|short_description=p@chr10:95360222..95360277,- | |||
}} | }} |
Latest revision as of 16:53, 23 July 2015
Short description: | p@chr10:95360222..95360277, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:95360222..95360277, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 7.72e-42 | 15 |
subcutaneous fat cell | 4.40e-20 | 3 |
hepatocyte | 4.44e-19 | 12 |
adipocyte of omentum tissue | 2.73e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 4.18e-21 | 19 |
digestive gland | 4.18e-21 | 19 |
liver bud | 4.18e-21 | 19 |
subcutaneous adipose tissue | 4.40e-20 | 3 |
hepatic diverticulum | 4.51e-18 | 22 |
liver primordium | 4.51e-18 | 22 |
digestive tract diverticulum | 3.09e-17 | 23 |
epithelial sac | 9.13e-16 | 25 |
epithelium of foregut-midgut junction | 9.13e-16 | 25 |
anatomical boundary | 9.13e-16 | 25 |
hepatobiliary system | 9.13e-16 | 25 |
foregut-midgut junction | 9.13e-16 | 25 |
septum transversum | 9.13e-16 | 25 |
sac | 4.09e-15 | 26 |
endocrine gland | 8.53e-14 | 35 |
exocrine gland | 1.72e-12 | 31 |
exocrine system | 1.72e-12 | 31 |
hypodermis | 2.82e-12 | 5 |
endocrine system | 2.08e-10 | 45 |
abdominal segment of trunk | 3.80e-09 | 60 |
abdomen | 3.80e-09 | 60 |
gut epithelium | 2.17e-08 | 54 |
chest muscle | 7.45e-08 | 1 |
respiratory system muscle | 7.45e-08 | 1 |
skeletal muscle of trunk | 7.45e-08 | 1 |
respiratory system skeletal muscle | 7.45e-08 | 1 |
thoracic segment muscle | 7.45e-08 | 1 |
chest organ | 7.45e-08 | 1 |
muscle of trunk | 7.45e-08 | 1 |
diaphragm | 7.45e-08 | 1 |
future diaphragm | 7.45e-08 | 1 |
surface | 1.18e-07 | 1 |
adipose tissue | 1.32e-07 | 14 |
gland | 1.35e-07 | 59 |