FFCP PHASE1:Hg19::chr10:95353720..95353759,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:95353720..95353759,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_at_chr10:95353720..95353759,- | |description=CAGE_peak_at_chr10:95353720..95353759,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000136!4.92e-16!15;CL:0000181!5.96e-10!12;CL:0000417!5.96e-10!12;CL:0000668!5.96e-10!12;CL:0000414!5.96e-10!12;CL:0000412!5.96e-10!12;CL:0000182!5.96e-10!12;CL:0002615!1.85e-08!3;CL:0000153!7.66e-07!9;CL:0000447!7.66e-07!9;CL:0000325!8.06e-07!39 | |ontology_enrichment_celltype=CL:0000136!4.92e-16!15;CL:0000181!5.96e-10!12;CL:0000417!5.96e-10!12;CL:0000668!5.96e-10!12;CL:0000414!5.96e-10!12;CL:0000412!5.96e-10!12;CL:0000182!5.96e-10!12;CL:0002615!1.85e-08!3;CL:0000153!7.66e-07!9;CL:0000447!7.66e-07!9;CL:0000325!8.06e-07!39 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.85e-43;13!CL:0000182;5.50e-15;12!CL:0002521;7.68e-11;3!CL:0002615;2.88e-10;3 | |ontology_enrichment_celltype_v019=CL:0000136;3.85e-43;13!CL:0000182;5.50e-15;12!CL:0002521;7.68e-11;3!CL:0002615;2.88e-10;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.74e-37,15;CL:0000182,5.34e-15,12;CL:0002521,7.87e-11,3;CL:0002615,3.01e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.09e-10;11!UBERON:0009497;4.59e-09;13 | |ontology_enrichment_development_v019=UBERON:0004161;1.09e-10;11!UBERON:0009497;4.59e-09;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.04e-17!115;UBERON:0002107!8.27e-10!19;UBERON:0006925!8.27e-10!19;UBERON:0008836!8.27e-10!19;UBERON:0009854!1.65e-09!23;UBERON:0009497!1.55e-08!25;UBERON:0000015!1.55e-08!25;UBERON:0002423!1.55e-08!25;UBERON:0006235!1.55e-08!25;UBERON:0004161!1.55e-08!25;UBERON:0008835!3.32e-08!22;UBERON:0003894!3.32e-08!22;UBERON:0009856!3.76e-08!26;UBERON:0005057!4.95e-08!26;UBERON:0000349!1.10e-07!5;UBERON:0007499!5.40e-07!25;UBERON:0003929!5.96e-07!54;UBERON:0004457!6.32e-07!12;UBERON:0000042!6.32e-07!12;UBERON:0002368!8.58e-07!35 | |ontology_enrichment_uberon=UBERON:0007023!2.04e-17!115;UBERON:0002107!8.27e-10!19;UBERON:0006925!8.27e-10!19;UBERON:0008836!8.27e-10!19;UBERON:0009854!1.65e-09!23;UBERON:0009497!1.55e-08!25;UBERON:0000015!1.55e-08!25;UBERON:0002423!1.55e-08!25;UBERON:0006235!1.55e-08!25;UBERON:0004161!1.55e-08!25;UBERON:0008835!3.32e-08!22;UBERON:0003894!3.32e-08!22;UBERON:0009856!3.76e-08!26;UBERON:0005057!4.95e-08!26;UBERON:0000349!1.10e-07!5;UBERON:0007499!5.40e-07!25;UBERON:0003929!5.96e-07!54;UBERON:0004457!6.32e-07!12;UBERON:0000042!6.32e-07!12;UBERON:0002368!8.58e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.26e-18;19!UBERON:0006925;4.26e-18;19!UBERON:0002423;1.47e-13;25!UBERON:0002368;1.33e-11;33!UBERON:0002190;7.68e-11;3!UBERON:0002365;2.56e-10;31!UBERON:0002330;2.56e-10;31!UBERON:0000949;8.76e-08;43!UBERON:0004457;1.36e-07;9!UBERON:0000042;1.36e-07;9!UBERON:0002072;7.82e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002107;4.26e-18;19!UBERON:0006925;4.26e-18;19!UBERON:0002423;1.47e-13;25!UBERON:0002368;1.33e-11;33!UBERON:0002190;7.68e-11;3!UBERON:0002365;2.56e-10;31!UBERON:0002330;2.56e-10;31!UBERON:0000949;8.76e-08;43!UBERON:0004457;1.36e-07;9!UBERON:0000042;1.36e-07;9!UBERON:0002072;7.82e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.15e-18,19;UBERON:0006925,4.15e-18,19;UBERON:0008836,4.15e-18,19;UBERON:0008835,1.57e-15,22;UBERON:0003894,1.57e-15,22;UBERON:0009854,8.08e-15,23;UBERON:0007499,1.44e-13,25;UBERON:0009497,1.44e-13,25;UBERON:0000015,1.44e-13,25;UBERON:0002423,1.44e-13,25;UBERON:0006235,1.44e-13,25;UBERON:0004161,1.44e-13,25;UBERON:0009856,5.15e-13,26;UBERON:0002368,3.49e-12,35;UBERON:0002190,7.87e-11,3;UBERON:0002365,8.82e-11,31;UBERON:0002330,8.82e-11,31;UBERON:0003929,1.51e-09,54;UBERON:0000949,3.15e-09,45;UBERON:0002530,1.41e-08,59;UBERON:0002417,2.23e-08,60;UBERON:0000916,2.23e-08,60;UBERON:0002072,7.94e-07,5 | |||
|phase1_expression=0,2.5692062866918,0.563817616383885,2.00146596706261,1.34088328328186,0,25.3299878168311,0,4.17897005119742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,1.01392563272577,0,0.486634870302636,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.912618107352,28.5019892836512,15.3605375737165,0,3.19769940212095,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59265908448164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1352180499991,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16661452946496,0.658589785919804,0,0,0,0,0,21.6530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78365540616599,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0.19924798825107,0.276283915531148,0.251932747854276,0,0,0,0,0,0,0.295930216910801,0,0,1.93866549219044,0.0927680981618513,0,0,0,3.62499787717397,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0,0,0,1.18174773460835,1.40106959247983,0.606631894687664,0.295282444544246,0,0.795229689809303,0,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,37.2242673542329,23.8512400041998,0,0.13223260174269,0.342173675768659,0,0.213574825135389,0,0,0,0,0,0,1.08803560673895,4.0110383043632,7.96498499585,4.91808946064707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,1.21393120847326,0.682986574053893,0.0887023701626388,0,0,0,0.0657727735628491,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.559277158988962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,1.38652688589425,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | |phase1_expression=0,2.5692062866918,0.563817616383885,2.00146596706261,1.34088328328186,0,25.3299878168311,0,4.17897005119742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,1.01392563272577,0,0.486634870302636,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.912618107352,28.5019892836512,15.3605375737165,0,3.19769940212095,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59265908448164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1352180499991,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16661452946496,0.658589785919804,0,0,0,0,0,21.6530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78365540616599,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0.19924798825107,0.276283915531148,0.251932747854276,0,0,0,0,0,0,0.295930216910801,0,0,1.93866549219044,0.0927680981618513,0,0,0,3.62499787717397,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0,0,0,1.18174773460835,1.40106959247983,0.606631894687664,0.295282444544246,0,0.795229689809303,0,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,37.2242673542329,23.8512400041998,0,0.13223260174269,0.342173675768659,0,0.213574825135389,0,0,0,0,0,0,1.08803560673895,4.0110383043632,7.96498499585,4.91808946064707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,1.21393120847326,0.682986574053893,0.0887023701626388,0,0,0,0.0657727735628491,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.559277158988962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,1.38652688589425,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | ||
|short_description=p@chr10:95353720..95353759,- | |short_description=p@chr10:95353720..95353759,- | ||
}} | }} |
Latest revision as of 16:53, 23 July 2015
Short description: | p@chr10:95353720..95353759, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:95353720..95353759, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.74e-37 | 15 |
hepatocyte | 5.34e-15 | 12 |
subcutaneous fat cell | 7.87e-11 | 3 |
adipocyte of omentum tissue | 3.01e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 4.15e-18 | 19 |
digestive gland | 4.15e-18 | 19 |
liver bud | 4.15e-18 | 19 |
hepatic diverticulum | 1.57e-15 | 22 |
liver primordium | 1.57e-15 | 22 |
digestive tract diverticulum | 8.08e-15 | 23 |
epithelial sac | 1.44e-13 | 25 |
epithelium of foregut-midgut junction | 1.44e-13 | 25 |
anatomical boundary | 1.44e-13 | 25 |
hepatobiliary system | 1.44e-13 | 25 |
foregut-midgut junction | 1.44e-13 | 25 |
septum transversum | 1.44e-13 | 25 |
sac | 5.15e-13 | 26 |
endocrine gland | 3.49e-12 | 35 |
subcutaneous adipose tissue | 7.87e-11 | 3 |
exocrine gland | 8.82e-11 | 31 |
exocrine system | 8.82e-11 | 31 |
gut epithelium | 1.51e-09 | 54 |
endocrine system | 3.15e-09 | 45 |
gland | 1.41e-08 | 59 |
abdominal segment of trunk | 2.23e-08 | 60 |
abdomen | 2.23e-08 | 60 |
hypodermis | 7.94e-07 | 5 |