FFCP PHASE1:Hg19::chr10:95353621..95353644,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:95353621..95353644,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_at_chr10:95353621..95353644,+ | |description=CAGE_peak_at_chr10:95353621..95353644,+ | ||
|id=chr10:95353621..95353644,+ | |id=chr10:95353621..95353644,+ | ||
|ontology_enrichment_celltype=CL:0000136!2.34e-15!15;CL:0000181!1.99e-11!12;CL:0000417!1.99e-11!12;CL:0000668!1.99e-11!12;CL:0000414!1.99e-11!12;CL:0000412!1.99e-11!12;CL:0000182!1.99e-11!12 | |ontology_enrichment_celltype=CL:0000136!2.34e-15!15;CL:0000181!1.99e-11!12;CL:0000417!1.99e-11!12;CL:0000668!1.99e-11!12;CL:0000414!1.99e-11!12;CL:0000412!1.99e-11!12;CL:0000182!1.99e-11!12 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.50e-31;13!CL:0000135;2.20e-16;3!CL:0002521;2.20e-16;3!CL:0000388;2.20e-16;3!CL:0000182;4.01e-16;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.43e-27,15;CL:0000135,2.04e-16,3;CL:0000388,2.04e-16,3;CL:0002521,2.20e-16,3;CL:0000182,4.09e-16,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.81e-10;11!UBERON:0009497;8.88e-09;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.94e-12!19;UBERON:0006925!2.94e-12!19;UBERON:0008836!2.94e-12!19;UBERON:0005057!1.22e-10!26;UBERON:0008835!2.18e-10!22;UBERON:0003894!2.18e-10!22;UBERON:0009854!7.11e-10!23;UBERON:0007499!5.70e-09!25;UBERON:0009497!5.70e-09!25;UBERON:0000015!5.70e-09!25;UBERON:0002423!5.70e-09!25;UBERON:0006235!5.70e-09!25;UBERON:0004161!5.70e-09!25;UBERON:0009856!1.43e-08!26;UBERON:0003929!9.77e-08!54;UBERON:0004905!1.48e-07!5;UBERON:0000982!1.48e-07!5;UBERON:0004770!1.48e-07!5;UBERON:0002365!5.78e-07!31;UBERON:0002330!5.78e-07!31 | |ontology_enrichment_uberon=UBERON:0002107!2.94e-12!19;UBERON:0006925!2.94e-12!19;UBERON:0008836!2.94e-12!19;UBERON:0005057!1.22e-10!26;UBERON:0008835!2.18e-10!22;UBERON:0003894!2.18e-10!22;UBERON:0009854!7.11e-10!23;UBERON:0007499!5.70e-09!25;UBERON:0009497!5.70e-09!25;UBERON:0000015!5.70e-09!25;UBERON:0002423!5.70e-09!25;UBERON:0006235!5.70e-09!25;UBERON:0004161!5.70e-09!25;UBERON:0009856!1.43e-08!26;UBERON:0003929!9.77e-08!54;UBERON:0004905!1.48e-07!5;UBERON:0000982!1.48e-07!5;UBERON:0004770!1.48e-07!5;UBERON:0002365!5.78e-07!31;UBERON:0002330!5.78e-07!31 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.04e-22;19!UBERON:0006925;3.04e-22;19!UBERON:0002423;7.73e-17;25!UBERON:0007846;2.20e-16;3!UBERON:0000043;2.20e-16;3!UBERON:0007845;2.20e-16;3!UBERON:0002190;2.20e-16;3!UBERON:0002365;9.09e-13;31!UBERON:0002330;9.09e-13;31!UBERON:0002368;5.26e-12;33!UBERON:0002072;3.27e-10;5!UBERON:0000949;3.15e-08;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.16e-22,19;UBERON:0006925,3.16e-22,19;UBERON:0008836,3.16e-22,19;UBERON:0008835,3.69e-19,22;UBERON:0003894,3.69e-19,22;UBERON:0009854,2.58e-18,23;UBERON:0007499,7.95e-17,25;UBERON:0009497,7.95e-17,25;UBERON:0000015,7.95e-17,25;UBERON:0002423,7.95e-17,25;UBERON:0006235,7.95e-17,25;UBERON:0004161,7.95e-17,25;UBERON:0007846,2.04e-16,3;UBERON:0000043,2.04e-16,3;UBERON:0007845,2.04e-16,3;UBERON:0002190,2.20e-16,3;UBERON:0009856,3.63e-16,26;UBERON:0002365,1.66e-13,31;UBERON:0002330,1.66e-13,31;UBERON:0002368,6.35e-12,35;UBERON:0002072,3.27e-10,5;UBERON:0000949,3.43e-09,45;UBERON:0003929,1.36e-07,54;UBERON:0005172,1.36e-07,54;UBERON:0005173,1.36e-07,54;UBERON:0002530,6.51e-07,59;UBERON:0002417,8.62e-07,60;UBERON:0000916,8.62e-07,60 | |||
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|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,2.53299878168311,0,1.04474251279935,0,0,0,0,0,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.8159062679296,12.7767538168091,6.49868897349544,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91555844261345,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11107635297664,0.987884678879706,0,0,0,0,0,3.38917682796405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.709048640765013,1.07140615895516,0.876246070104404,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1638353952808,10.6005511129777,0,0,0,0,0,0,0,0,0,0,0,1.08803560673895,2.0055191521816,2.45076461410769,1.96723578425883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0.111231401892069,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,2.31087814315709,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p@chr10:95353621..95353644,+ | |short_description=p@chr10:95353621..95353644,+ | ||
}} | }} |
Latest revision as of 16:53, 23 July 2015
Short description: | p@chr10:95353621..95353644, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:95353621..95353644, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.43e-27 | 15 |
fibrocyte | 2.04e-16 | 3 |
tendon cell | 2.04e-16 | 3 |
subcutaneous fat cell | 2.20e-16 | 3 |
hepatocyte | 4.09e-16 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.16e-22 | 19 |
digestive gland | 3.16e-22 | 19 |
liver bud | 3.16e-22 | 19 |
hepatic diverticulum | 3.69e-19 | 22 |
liver primordium | 3.69e-19 | 22 |
digestive tract diverticulum | 2.58e-18 | 23 |
epithelial sac | 7.95e-17 | 25 |
epithelium of foregut-midgut junction | 7.95e-17 | 25 |
anatomical boundary | 7.95e-17 | 25 |
hepatobiliary system | 7.95e-17 | 25 |
foregut-midgut junction | 7.95e-17 | 25 |
septum transversum | 7.95e-17 | 25 |
dense regular connective tissue | 2.04e-16 | 3 |
tendon | 2.04e-16 | 3 |
regular connective tissue | 2.04e-16 | 3 |
subcutaneous adipose tissue | 2.20e-16 | 3 |
sac | 3.63e-16 | 26 |
exocrine gland | 1.66e-13 | 31 |
exocrine system | 1.66e-13 | 31 |
endocrine gland | 6.35e-12 | 35 |
hypodermis | 3.27e-10 | 5 |
endocrine system | 3.43e-09 | 45 |
gut epithelium | 1.36e-07 | 54 |
abdomen element | 1.36e-07 | 54 |
abdominal segment element | 1.36e-07 | 54 |
gland | 6.51e-07 | 59 |
abdominal segment of trunk | 8.62e-07 | 60 |
abdomen | 8.62e-07 | 60 |