FFCP PHASE1:Hg19::chr10:8106040..8106054,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:8106040..8106054,+ | |||
|coexpression_cluster_id=C1124 | |coexpression_cluster_id=C1124 | ||
|description=CAGE_peak_at_chr10:8106040..8106054,+ | |description=CAGE_peak_at_chr10:8106040..8106054,+ | ||
|id=chr10:8106040..8106054,+ | |id=chr10:8106040..8106054,+ | ||
|ontology_enrichment_celltype=CL:0002541!4.50e-08!3;CL:0000084!8.24e-08!25;CL:0000827!8.24e-08!25 | |ontology_enrichment_celltype=CL:0002541!4.50e-08!3;CL:0000084!8.24e-08!25;CL:0000827!8.24e-08!25 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.14e-27;3!CL:0000349;4.36e-17;19!CL:0000623;7.26e-08;3!CL:0002577;7.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.22e-27,3;CL:0000349,4.27e-17,19;CL:0002577,7.26e-08,3;CL:0000623,7.76e-08,3;CL:0000825,7.76e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!1.44e-10!4;DOID:1612!1.44e-10!4 | |ontology_enrichment_disease=DOID:5093!1.44e-10!4;DOID:1612!1.44e-10!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;1.82e-45;4!DOID:1612;1.82e-45;4!DOID:299;7.40e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.69e-45,4;DOID:1612,1.69e-45,4;DOID:299,7.31e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0005631!6.79e-15!14;UBERON:0000158!6.79e-15!14;UBERON:0003124!9.58e-12!7;UBERON:0000478!3.45e-09!24;UBERON:0000476!4.50e-08!3;UBERON:0000920!4.50e-08!3 | |ontology_enrichment_uberon=UBERON:0005631!6.79e-15!14;UBERON:0000158!6.79e-15!14;UBERON:0003124!9.58e-12!7;UBERON:0000478!3.45e-09!24;UBERON:0000476!4.50e-08!3;UBERON:0000920!4.50e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.14e-27;3!UBERON:0000920;1.14e-27;3!UBERON:0000310;1.10e-18;10!UBERON:0005631;1.40e-18;10!UBERON:0000158;1.40e-18;10!UBERON:0001443;4.71e-17;11!UBERON:0000478;1.29e-13;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.22e-27,3;UBERON:0003124,3.45e-26,7;UBERON:0005631,4.97e-23,14;UBERON:0000158,4.97e-23,14;UBERON:0000310,1.07e-18,10;UBERON:0001443,4.59e-17,11;UBERON:0000478,1.27e-13,24 | |||
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| ||
|short_description=p@chr10:8106040..8106054,+ | |short_description=p@chr10:8106040..8106054,+ | ||
}} | }} |
Latest revision as of 16:00, 23 July 2015
Short description: | p@chr10:8106040..8106054, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:8106040..8106054, + |
Coexpression cluster: | C1124_MCF7_breast_chorionic_nasal_choriocarcinoma_seminal_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.22e-27 | 3 |
extraembryonic cell | 4.27e-17 | 19 |
placental epithelial cell | 7.26e-08 | 3 |
natural killer cell | 7.76e-08 | 3 |
pro-NK cell | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.22e-27 | 3 |
chorion | 3.45e-26 | 7 |
extraembryonic membrane | 4.97e-23 | 14 |
membranous layer | 4.97e-23 | 14 |
breast | 1.07e-18 | 10 |
chest | 4.59e-17 | 11 |
extraembryonic structure | 1.27e-13 | 24 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.69e-45 | 4 |
breast cancer | 1.69e-45 | 4 |
adenocarcinoma | 7.31e-08 | 25 |