FFCP PHASE1:Hg19::chr10:8087114..8087132,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:8087114..8087132,+ | |||
|coexpression_cluster_id=C3050 | |coexpression_cluster_id=C3050 | ||
|description=CAGE_peak_at_chr10:8087114..8087132,+ | |description=CAGE_peak_at_chr10:8087114..8087132,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.48e-20;5!CL:0000214;1.67e-09;3!CL:0002327;1.40e-07;4!CL:0002321;1.65e-07;15 | |ontology_enrichment_celltype_v019=CL:0000333;1.48e-20;5!CL:0000214;1.67e-09;3!CL:0002327;1.40e-07;4!CL:0002321;1.65e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000214,1.67e-09,3;CL:0002327,1.40e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.78e-26;1!UBERON:0005754;4.61e-26;1!UBERON:0007297;9.40e-14;2!UBERON:0003918;6.28e-11;10!UBERON:0007687;6.28e-11;10 | |ontology_enrichment_development_v019=UBERON:0008425;2.78e-26;1!UBERON:0005754;4.61e-26;1!UBERON:0007297;9.40e-14;2!UBERON:0003918;6.28e-11;10!UBERON:0007687;6.28e-11;10 | ||
|ontology_enrichment_disease=DOID:5093!2.62e-18!4;DOID:1612!2.62e-18!4;DOID:4929!5.56e-09!2;DOID:169!4.30e-07!6 | |ontology_enrichment_disease=DOID:5093!2.62e-18!4;DOID:1612!2.62e-18!4;DOID:4929!5.56e-09!2;DOID:169!4.30e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:5093;7.64e-26;4!DOID:1612;7.64e-26;4!DOID:169;2.58e-17;6!DOID:3095;8.20e-11;22!DOID:2994;8.20e-11;22!DOID:171;8.47e-11;10 | |ontology_enrichment_disease_v019=DOID:5093;7.64e-26;4!DOID:1612;7.64e-26;4!DOID:169;2.58e-17;6!DOID:3095;8.20e-11;22!DOID:2994;8.20e-11;22!DOID:171;8.47e-11;10 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,6.73e-26,4;DOID:1612,6.73e-26,4;DOID:169,2.58e-17,6;DOID:3095,8.20e-11,22;DOID:2994,8.20e-11,22;DOID:171,8.47e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0000013!1.94e-08!5;UBERON:0002410!1.94e-08!5;UBERON:0000310!2.48e-07!10;UBERON:0006947!7.68e-07!3;UBERON:0004054!7.68e-07!3 | |ontology_enrichment_uberon=UBERON:0000013!1.94e-08!5;UBERON:0002410!1.94e-08!5;UBERON:0000310!2.48e-07!10;UBERON:0006947!7.68e-07!3;UBERON:0004054!7.68e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000998;4.61e-26;1!UBERON:0006868;4.61e-26;1!UBERON:0000013;1.48e-20;5!UBERON:0002410;1.48e-20;5!UBERON:0000010;6.88e-12;8!UBERON:0000310;5.69e-11;10!UBERON:0001443;4.62e-10;11!UBERON:0006947;1.30e-09;3!UBERON:0004054;1.30e-09;3!UBERON:0006915;1.67e-09;3!UBERON:0007616;1.67e-09;3!UBERON:0002217;1.67e-09;3!UBERON:0002018;1.67e-09;3!UBERON:0001911;1.40e-07;4!UBERON:0005904;1.59e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000998;4.61e-26;1!UBERON:0006868;4.61e-26;1!UBERON:0000013;1.48e-20;5!UBERON:0002410;1.48e-20;5!UBERON:0000010;6.88e-12;8!UBERON:0000310;5.69e-11;10!UBERON:0001443;4.62e-10;11!UBERON:0006947;1.30e-09;3!UBERON:0004054;1.30e-09;3!UBERON:0006915;1.67e-09;3!UBERON:0007616;1.67e-09;3!UBERON:0002217;1.67e-09;3!UBERON:0002018;1.67e-09;3!UBERON:0001911;1.40e-07;4!UBERON:0005904;1.59e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,5.93e-26,1;UBERON:0006868,5.93e-26,1;UBERON:0000013,1.48e-20,5;UBERON:0002410,1.48e-20,5;UBERON:0000010,6.88e-12,8;UBERON:0000310,5.41e-11,10;UBERON:0001443,4.42e-10,11;UBERON:0006947,1.41e-09,3;UBERON:0004054,1.41e-09,3;UBERON:0006915,1.67e-09,3;UBERON:0007616,1.67e-09,3;UBERON:0002217,1.67e-09,3;UBERON:0002018,1.67e-09,3;UBERON:0001911,1.40e-07,4;UBERON:0005333,1.40e-07,4;UBERON:0008425,1.40e-07,4;UBERON:0005311,1.40e-07,4;UBERON:0005904,1.69e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0.99921590399346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0.269605053441981,0,0,0,0,0,0,0,0,0.520855522170466,5.07267999977935,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.359030577639089,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400794101257669,0,0,0,0.114536596165916,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709251365692784,2.25554728980492,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,1.83302179374359,0,1.09209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.227662191351298,0,0.115233987555779,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11693525095465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26217249754548,0,0,0,0,0,0,0,0,6.96841755562903,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0.99921590399346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0.269605053441981,0,0,0,0,0,0,0,0,0.520855522170466,5.07267999977935,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.359030577639089,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400794101257669,0,0,0,0.114536596165916,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709251365692784,2.25554728980492,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,1.83302179374359,0,1.09209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.227662191351298,0,0.115233987555779,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11693525095465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26217249754548,0,0,0,0,0,0,0,0,6.96841755562903,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr10:8087114..8087132,+ | |short_description=p@chr10:8087114..8087132,+ | ||
}} | }} |
Latest revision as of 15:52, 23 July 2015
Short description: | p@chr10:8087114..8087132, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:8087114..8087132, + |
Coexpression cluster: | C3050_teratocarcinoma_breast_seminal_neuroblastoma_MCF7_kidney_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 1.67e-09 | 3 |
mammary gland epithelial cell | 1.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 5.93e-26 | 1 |
seminal fluid secreting gland | 5.93e-26 | 1 |
sympathetic nervous system | 1.48e-20 | 5 |
autonomic nervous system | 1.48e-20 | 5 |
peripheral nervous system | 6.88e-12 | 8 |
breast | 5.41e-11 | 10 |
chest | 4.42e-10 | 11 |
male genital duct | 1.41e-09 | 3 |
internal male genitalia | 1.41e-09 | 3 |
stratified squamous epithelium | 1.67e-09 | 3 |
layer of synovial tissue | 1.67e-09 | 3 |
synovial joint | 1.67e-09 | 3 |
synovial membrane of synovial joint | 1.67e-09 | 3 |
mammary gland | 1.40e-07 | 4 |
mammary bud | 1.40e-07 | 4 |
mammary ridge | 1.40e-07 | 4 |
mammary placode | 1.40e-07 | 4 |
duct of male reproductive system | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 6.73e-26 | 4 |
breast cancer | 6.73e-26 | 4 |
neuroendocrine tumor | 2.58e-17 | 6 |
germ cell and embryonal cancer | 8.20e-11 | 22 |
germ cell cancer | 8.20e-11 | 22 |
neuroectodermal tumor | 8.47e-11 | 10 |