FFCP PHASE1:Hg19::chr10:80170310..80170313,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:80170310..80170313,+ | |||
|coexpression_cluster_id=C583 | |coexpression_cluster_id=C583 | ||
|description=CAGE_peak_at_chr10:80170310..80170313,+ | |description=CAGE_peak_at_chr10:80170310..80170313,+ | ||
|id=chr10:80170310..80170313,+ | |id=chr10:80170310..80170313,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.42e-58!42;CL:0000557!1.54e-56!71;CL:0000766!5.30e-56!76;CL:0000839!6.75e-55!70;CL:0000860!2.56e-53!45;CL:0000763!3.52e-53!112;CL:0000049!3.52e-53!112;CL:0000738!9.87e-53!140;CL:0002009!2.14e-52!65;CL:0002032!1.59e-51!165;CL:0000837!1.59e-51!165;CL:0000037!3.43e-51!172;CL:0000566!3.43e-51!172;CL:0002194!9.52e-50!63;CL:0000576!9.52e-50!63;CL:0000040!9.52e-50!63;CL:0000559!9.52e-50!63;CL:0002031!1.10e-48!124;CL:0000988!6.46e-47!182;CL:0002087!3.25e-42!119;CL:0000134!1.20e-12!358;CL:0002320!5.87e-12!365;CL:0000219!1.41e-09!390;CL:0000048!4.40e-08!430;CL:0002393!5.48e-08!9;CL:0002397!5.48e-08!9;CL:0000723!1.13e-07!436;CL:0000034!1.45e-07!444;CL:0000453!3.04e-07!5 | |ontology_enrichment_celltype=CL:0002057!3.42e-58!42;CL:0000557!1.54e-56!71;CL:0000766!5.30e-56!76;CL:0000839!6.75e-55!70;CL:0000860!2.56e-53!45;CL:0000763!3.52e-53!112;CL:0000049!3.52e-53!112;CL:0000738!9.87e-53!140;CL:0002009!2.14e-52!65;CL:0002032!1.59e-51!165;CL:0000837!1.59e-51!165;CL:0000037!3.43e-51!172;CL:0000566!3.43e-51!172;CL:0002194!9.52e-50!63;CL:0000576!9.52e-50!63;CL:0000040!9.52e-50!63;CL:0000559!9.52e-50!63;CL:0002031!1.10e-48!124;CL:0000988!6.46e-47!182;CL:0002087!3.25e-42!119;CL:0000134!1.20e-12!358;CL:0002320!5.87e-12!365;CL:0000219!1.41e-09!390;CL:0000048!4.40e-08!430;CL:0002393!5.48e-08!9;CL:0002397!5.48e-08!9;CL:0000723!1.13e-07!436;CL:0000034!1.45e-07!444;CL:0000453!3.04e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.08e-84;33!CL:0002057;2.08e-84;33!CL:0000473;1.17e-69;39!CL:0000234;1.17e-69;39!CL:0000576;1.51e-51;48!CL:0000766;1.76e-38;69!CL:0000763;2.03e-17;100!CL:0002087;1.05e-11;104!CL:0000738;6.23e-11;136!CL:0000097;1.35e-10;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.96e-96,48;CL:0000234,1.96e-96,48;CL:0000860,4.99e-95,42;CL:0002057,4.99e-95,42;CL:0000557,1.62e-87,67;CL:0000839,2.06e-81,66;CL:0002009,1.64e-79,61;CL:0000766,1.35e-77,72;CL:0002194,7.08e-75,59;CL:0000576,7.08e-75,59;CL:0000040,7.08e-75,59;CL:0000559,7.08e-75,59;CL:0000763,1.44e-52,108;CL:0000049,1.44e-52,108;CL:0002031,7.35e-46,120;CL:0000738,3.66e-41,136;CL:0002087,3.44e-35,115;CL:0002032,7.44e-33,161;CL:0000837,7.44e-33,161;CL:0000037,5.70e-31,168;CL:0000988,9.10e-29,177;CL:0000097,1.47e-10,5;CL:0002028,1.47e-10,5;CL:0000134,2.16e-08,354;CL:0002320,5.20e-08,361;CL:0002393,1.03e-07,9;CL:0002397,1.03e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;8.49e-68;42!CL:0000049;7.04e-16;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.91e-50!80;UBERON:0002390!1.17e-49!102;UBERON:0003061!1.17e-49!102;UBERON:0002193!3.34e-48!112;UBERON:0001474!2.91e-45!86;UBERON:0002405!1.45e-38!115;UBERON:0004765!7.77e-36!101;UBERON:0001434!7.77e-36!101;UBERON:0002204!1.02e-15!167;UBERON:0003081!3.39e-15!216;UBERON:0002384!5.01e-11!375 | |ontology_enrichment_uberon=UBERON:0002371!4.91e-50!80;UBERON:0002390!1.17e-49!102;UBERON:0003061!1.17e-49!102;UBERON:0002193!3.34e-48!112;UBERON:0001474!2.91e-45!86;UBERON:0002405!1.45e-38!115;UBERON:0004765!7.77e-36!101;UBERON:0001434!7.77e-36!101;UBERON:0002204!1.02e-15!167;UBERON:0003081!3.39e-15!216;UBERON:0002384!5.01e-11!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.90e-76,76;UBERON:0001474,1.91e-69,82;UBERON:0004765,3.03e-62,90;UBERON:0002390,2.60e-61,98;UBERON:0003061,2.60e-61,98;UBERON:0002405,7.32e-60,93;UBERON:0001434,7.51e-55,100;UBERON:0002193,1.62e-54,108;UBERON:0002204,4.65e-28,167;UBERON:0003081,2.95e-23,203;UBERON:0000926,1.02e-10,315;UBERON:0004120,1.02e-10,315;UBERON:0006603,1.02e-10,315;UBERON:0002384,1.72e-07,371 | |||
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| ||
|short_description=p@chr10:80170310..80170313,+ | |short_description=p@chr10:80170310..80170313,+ | ||
}} | }} |
Latest revision as of 15:50, 23 July 2015
Short description: | p@chr10:80170310..80170313, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:80170310..80170313, + |
Coexpression cluster: | C583_CD14_Monocytederived_Basophils_CD14CD16_immature_Mast_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.96e-96 | 48 |
phagocyte | 1.96e-96 | 48 |
classical monocyte | 4.99e-95 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.99e-95 | 42 |
granulocyte monocyte progenitor cell | 1.62e-87 | 67 |
myeloid lineage restricted progenitor cell | 2.06e-81 | 66 |
macrophage dendritic cell progenitor | 1.64e-79 | 61 |
myeloid leukocyte | 1.35e-77 | 72 |
monopoietic cell | 7.08e-75 | 59 |
monocyte | 7.08e-75 | 59 |
monoblast | 7.08e-75 | 59 |
promonocyte | 7.08e-75 | 59 |
myeloid cell | 1.44e-52 | 108 |
common myeloid progenitor | 1.44e-52 | 108 |
hematopoietic lineage restricted progenitor cell | 7.35e-46 | 120 |
leukocyte | 3.66e-41 | 136 |
nongranular leukocyte | 3.44e-35 | 115 |
hematopoietic oligopotent progenitor cell | 7.44e-33 | 161 |
hematopoietic multipotent progenitor cell | 7.44e-33 | 161 |
hematopoietic stem cell | 5.70e-31 | 168 |
hematopoietic cell | 9.10e-29 | 177 |
mast cell | 1.47e-10 | 5 |
basophil mast progenitor cell | 1.47e-10 | 5 |
mesenchymal cell | 2.16e-08 | 354 |
connective tissue cell | 5.20e-08 | 361 |
intermediate monocyte | 1.03e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.03e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.90e-76 | 76 |
bone element | 1.91e-69 | 82 |
skeletal element | 3.03e-62 | 90 |
hematopoietic system | 2.60e-61 | 98 |
blood island | 2.60e-61 | 98 |
immune system | 7.32e-60 | 93 |
skeletal system | 7.51e-55 | 100 |
hemolymphoid system | 1.62e-54 | 108 |
musculoskeletal system | 4.65e-28 | 167 |
lateral plate mesoderm | 2.95e-23 | 203 |
mesoderm | 1.02e-10 | 315 |
mesoderm-derived structure | 1.02e-10 | 315 |
presumptive mesoderm | 1.02e-10 | 315 |
connective tissue | 1.72e-07 | 371 |