FFCP PHASE1:Hg19::chr10:71850931..71850940,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:71850931..71850940,+ | |||
|coexpression_cluster_id=C228 | |||
|description=CAGE_peak_at_chr10:71850931..71850940,+ | |description=CAGE_peak_at_chr10:71850931..71850940,+ | ||
|id=chr10:71850931..71850940,+ | |id=chr10:71850931..71850940,+ | ||
|ontology_enrichment_celltype=CL:0000181!3.75e-17!12;CL:0000417!3.75e-17!12;CL:0000668!3.75e-17!12;CL:0000414!3.75e-17!12;CL:0000412!3.75e-17!12;CL:0000182!3.75e-17!12;CL:0002563!1.11e-13!4;CL:0000223!6.43e-10!59;CL:0002253!9.87e-08!2 | |ontology_enrichment_celltype=CL:0000181!3.75e-17!12;CL:0000417!3.75e-17!12;CL:0000668!3.75e-17!12;CL:0000414!3.75e-17!12;CL:0000412!3.75e-17!12;CL:0000182!3.75e-17!12;CL:0002563!1.11e-13!4;CL:0000223!6.43e-10!59;CL:0002253!9.87e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002253;6.30e-26;2!CL:0000182;1.57e-17;12!CL:0002563;1.06e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,5.56e-26,2;CL:0000182,1.85e-17,12;CL:0002563,1.00e-13,4;CL:0000223,1.46e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.14e-19;11!UBERON:0009497;2.84e-16;13!UBERON:0003104;6.32e-15;31!UBERON:0001041;1.17e-07;30 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.62e-16!19;UBERON:0006925!1.62e-16!19;UBERON:0008836!1.62e-16!19;UBERON:0008835!2.91e-14!22;UBERON:0003894!2.91e-14!22;UBERON:0003929!4.10e-14!54;UBERON:0001301!8.58e-14!1;UBERON:0001242!1.11e-13!4;UBERON:0001262!1.11e-13!4;UBERON:0004786!1.11e-13!4;UBERON:0004808!1.11e-13!4;UBERON:0001277!1.11e-13!4;UBERON:0009854!1.22e-13!23;UBERON:0007499!1.51e-12!25;UBERON:0009497!1.51e-12!25;UBERON:0000015!1.51e-12!25;UBERON:0002423!1.51e-12!25;UBERON:0006235!1.51e-12!25;UBERON:0004161!1.51e-12!25;UBERON:0005057!4.60e-12!26;UBERON:0009856!4.60e-12!26;UBERON:0005911!2.15e-11!82;UBERON:0003350!3.92e-11!5;UBERON:0005172!1.41e-10!55;UBERON:0005173!1.41e-10!55;UBERON:0004921!2.62e-10!129;UBERON:0004185!2.62e-10!129;UBERON:0002365!4.15e-10!31;UBERON:0002330!4.15e-10!31;UBERON:0002417!1.77e-09!61;UBERON:0000916!1.77e-09!61;UBERON:0002368!6.07e-09!35;UBERON:0001007!2.38e-08!155;UBERON:0001555!2.38e-08!155;UBERON:0007026!2.38e-08!155;UBERON:0004119!1.53e-07!169;UBERON:0000925!1.53e-07!169;UBERON:0006595!1.53e-07!169;UBERON:0000160!1.91e-07!27;UBERON:0002530!2.48e-07!59;UBERON:0000949!6.25e-07!45 | |ontology_enrichment_uberon=UBERON:0002107!1.62e-16!19;UBERON:0006925!1.62e-16!19;UBERON:0008836!1.62e-16!19;UBERON:0008835!2.91e-14!22;UBERON:0003894!2.91e-14!22;UBERON:0003929!4.10e-14!54;UBERON:0001301!8.58e-14!1;UBERON:0001242!1.11e-13!4;UBERON:0001262!1.11e-13!4;UBERON:0004786!1.11e-13!4;UBERON:0004808!1.11e-13!4;UBERON:0001277!1.11e-13!4;UBERON:0009854!1.22e-13!23;UBERON:0007499!1.51e-12!25;UBERON:0009497!1.51e-12!25;UBERON:0000015!1.51e-12!25;UBERON:0002423!1.51e-12!25;UBERON:0006235!1.51e-12!25;UBERON:0004161!1.51e-12!25;UBERON:0005057!4.60e-12!26;UBERON:0009856!4.60e-12!26;UBERON:0005911!2.15e-11!82;UBERON:0003350!3.92e-11!5;UBERON:0005172!1.41e-10!55;UBERON:0005173!1.41e-10!55;UBERON:0004921!2.62e-10!129;UBERON:0004185!2.62e-10!129;UBERON:0002365!4.15e-10!31;UBERON:0002330!4.15e-10!31;UBERON:0002417!1.77e-09!61;UBERON:0000916!1.77e-09!61;UBERON:0002368!6.07e-09!35;UBERON:0001007!2.38e-08!155;UBERON:0001555!2.38e-08!155;UBERON:0007026!2.38e-08!155;UBERON:0004119!1.53e-07!169;UBERON:0000925!1.53e-07!169;UBERON:0006595!1.53e-07!169;UBERON:0000160!1.91e-07!27;UBERON:0002530!2.48e-07!59;UBERON:0000949!6.25e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;1.06e-13;4!UBERON:0001242;1.06e-13;4!UBERON:0001262;1.06e-13;4!UBERON:0004786;1.06e-13;4!UBERON:0004808;1.06e-13;4!UBERON:0001277;1.06e-13;4!UBERON:0000160;4.55e-12;17!UBERON:0002107;1.72e-11;19!UBERON:0006925;1.72e-11;19!UBERON:0002108;3.10e-11;4!UBERON:0004907;3.10e-11;5!UBERON:0005409;1.12e-09;22!UBERON:0002423;5.49e-09;25!UBERON:0000485;2.11e-08;7!UBERON:0003929;2.11e-08;7!UBERON:0002365;1.17e-07;31!UBERON:0002330;1.17e-07;31!UBERON:0003350;1.64e-07;8!UBERON:0004921;3.58e-07;33!UBERON:0001155;8.14e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.00e-13,4;UBERON:0001242,1.00e-13,4;UBERON:0001262,1.00e-13,4;UBERON:0004786,1.00e-13,4;UBERON:0004808,1.00e-13,4;UBERON:0001277,1.00e-13,4;UBERON:0000160,4.07e-12,17;UBERON:0002107,1.91e-11,19;UBERON:0006925,1.91e-11,19;UBERON:0008836,1.91e-11,19;UBERON:0002108,2.66e-11,4;UBERON:0004907,2.94e-11,5;UBERON:0008835,4.96e-10,22;UBERON:0003894,4.96e-10,22;UBERON:0009854,1.22e-09,23;UBERON:0003929,3.93e-09,54;UBERON:0007499,5.95e-09,25;UBERON:0009497,5.95e-09,25;UBERON:0000015,5.95e-09,25;UBERON:0002423,5.95e-09,25;UBERON:0006235,5.95e-09,25;UBERON:0004161,5.95e-09,25;UBERON:0005409,1.03e-08,25;UBERON:0009856,1.20e-08,26;UBERON:0003350,1.59e-07,8;UBERON:0004921,1.75e-07,118;UBERON:0002365,2.05e-07,31;UBERON:0002330,2.05e-07,31;UBERON:0001155,7.91e-07,9;UBERON:0000485,7.91e-07,9 | |||
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|short_description=p@chr10:71850931..71850940,+ | |short_description=p@chr10:71850931..71850940,+ | ||
}} | }} |
Latest revision as of 15:08, 23 July 2015
Short description: | p@chr10:71850931..71850940, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:71850931..71850940, + |
Coexpression cluster: | C228_colon_Intestinal_Prostate_hepatoblastoma_hepatocellular_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 5.56e-26 | 2 |
hepatocyte | 1.85e-17 | 12 |
intestinal epithelial cell | 1.00e-13 | 4 |
endodermal cell | 1.46e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
rectum | 1.00e-13 | 4 |
intestinal mucosa | 1.00e-13 | 4 |
wall of intestine | 1.00e-13 | 4 |
gastrointestinal system mucosa | 1.00e-13 | 4 |
gastrointestinal system epithelium | 1.00e-13 | 4 |
intestinal epithelium | 1.00e-13 | 4 |
intestine | 4.07e-12 | 17 |
liver | 1.91e-11 | 19 |
digestive gland | 1.91e-11 | 19 |
liver bud | 1.91e-11 | 19 |
small intestine | 2.66e-11 | 4 |
lower digestive tract | 2.94e-11 | 5 |
hepatic diverticulum | 4.96e-10 | 22 |
liver primordium | 4.96e-10 | 22 |
digestive tract diverticulum | 1.22e-09 | 23 |
gut epithelium | 3.93e-09 | 54 |
epithelial sac | 5.95e-09 | 25 |
epithelium of foregut-midgut junction | 5.95e-09 | 25 |
anatomical boundary | 5.95e-09 | 25 |
hepatobiliary system | 5.95e-09 | 25 |
foregut-midgut junction | 5.95e-09 | 25 |
septum transversum | 5.95e-09 | 25 |
gastrointestinal system | 1.03e-08 | 25 |
sac | 1.20e-08 | 26 |
epithelium of mucosa | 1.59e-07 | 8 |
subdivision of digestive tract | 1.75e-07 | 118 |
exocrine gland | 2.05e-07 | 31 |
exocrine system | 2.05e-07 | 31 |
colon | 7.91e-07 | 9 |
simple columnar epithelium | 7.91e-07 | 9 |