FFCP PHASE1:Hg19::chr10:71094364..71094378,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:71094364..71094378,+
|short_description=p@chr10:71094364..71094378,+
|description=CAGE_peak_at_chr10:71094364..71094378,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:71094364..71094378,+ | |||
|description=CAGE_peak_at_chr10:71094364..71094378,+ | |||
|id=chr10:71094364..71094378,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;4.09e-18;2!CL:0000558;4.09e-18;2!CL:0000039;3.02e-11;7!CL:0000586;3.02e-11;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.46e-18,2;CL:0000765,4.46e-18,2;CL:0000050,4.46e-18,2;CL:0000038,4.46e-18,2;CL:0000558,4.46e-18,2;CL:0000547,4.46e-18,2;CL:0000549,4.46e-18,2;CL:0000550,4.46e-18,2;CL:0000552,4.46e-18,2;CL:0000763,1.03e-12,108;CL:0000049,1.03e-12,108;CL:0000039,2.67e-11,7;CL:0000586,2.67e-11,7;CL:0000988,1.22e-10,177;CL:0002032,9.60e-08,161;CL:0000837,9.60e-08,161;CL:0000037,2.54e-07,168 | |||
|ontology_enrichment_development_v019=UBERON:0010226;2.08e-09;1 | |||
|ontology_enrichment_disease=DOID:1036!3.44e-16!8;DOID:8692!7.81e-10!31;DOID:1240!3.22e-07!39;DOID:2531!9.84e-07!51;DOID:0060083!9.84e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:1036;4.03e-51;8!DOID:8692;5.47e-30;31!DOID:1240;6.43e-20;39!DOID:2531;2.50e-12;51!DOID:0060083;2.50e-12;51!DOID:8552;8.53e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,5.04e-51,8;DOID:8692,4.40e-31,31;DOID:1240,2.39e-24,39;DOID:2531,3.36e-18,51;DOID:0060083,3.36e-18,51;DOID:8552,8.91e-10,1;DOID:0050686,9.84e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0000478!3.63e-08!24;UBERON:0005631!2.55e-07!14;UBERON:0000158!2.55e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;2.08e-09;1!UBERON:0002082;2.08e-09;1!UBERON:0002331;5.92e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,2.08e-09,1;UBERON:0002082,2.08e-09,1;UBERON:0010226,2.08e-09,1;UBERON:0002331,6.52e-08,10;UBERON:0000358,6.52e-08,10;UBERON:0000307,6.52e-08,10;UBERON:0000091,6.52e-08,10;UBERON:0000087,6.52e-08,10;UBERON:0007010,6.52e-08,10;UBERON:0007806,6.52e-08,10;UBERON:0008780,6.52e-08,10;UBERON:0005728,6.52e-08,10 | |||
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| ||
|short_description=p@chr10:71094364..71094378,+ | |||
}} | }} |
Latest revision as of 15:06, 23 July 2015
Short description: | p@chr10:71094364..71094378, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:71094364..71094378, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.46e-18 | 2 |
erythroblast | 4.46e-18 | 2 |
megakaryocyte-erythroid progenitor cell | 4.46e-18 | 2 |
erythroid progenitor cell | 4.46e-18 | 2 |
reticulocyte | 4.46e-18 | 2 |
proerythroblast | 4.46e-18 | 2 |
basophilic erythroblast | 4.46e-18 | 2 |
polychromatophilic erythroblast | 4.46e-18 | 2 |
orthochromatic erythroblast | 4.46e-18 | 2 |
myeloid cell | 1.03e-12 | 108 |
common myeloid progenitor | 1.03e-12 | 108 |
germ line cell | 2.67e-11 | 7 |
germ cell | 2.67e-11 | 7 |
hematopoietic cell | 1.22e-10 | 177 |
hematopoietic oligopotent progenitor cell | 9.60e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.60e-08 | 161 |
hematopoietic stem cell | 2.54e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 2.08e-09 | 1 |
cardiac ventricle | 2.08e-09 | 1 |
future cardiac ventricle | 2.08e-09 | 1 |
umbilical cord | 6.52e-08 | 10 |
blastocyst | 6.52e-08 | 10 |
blastula | 6.52e-08 | 10 |
bilaminar disc | 6.52e-08 | 10 |
inner cell mass | 6.52e-08 | 10 |
cleaving embryo | 6.52e-08 | 10 |
connecting stalk | 6.52e-08 | 10 |
inner cell mass derived epiblast | 6.52e-08 | 10 |
extraembryonic mesoderm | 6.52e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 5.04e-51 | 8 |
myeloid leukemia | 4.40e-31 | 31 |
leukemia | 2.39e-24 | 39 |
hematologic cancer | 3.36e-18 | 51 |
immune system cancer | 3.36e-18 | 51 |
chronic myeloid leukemia | 8.91e-10 | 1 |
organ system cancer | 9.84e-07 | 137 |