FFCP PHASE1:Hg19::chr10:6622512..6622523,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=11bp_to_uc001ijl.2_5end | |||
|cluster_id=chr10:6622512..6622523,+ | |||
|description=CAGE_peak_3_at_uc001ijl.2_5end | |||
|id=chr10:6622512..6622523,+ | |||
|ontology_enrichment_celltype=CL:0000084!1.10e-13!25;CL:0000827!1.10e-13!25;CL:0000791!7.56e-13!18;CL:0000789!7.56e-13!18;CL:0002420!7.56e-13!18;CL:0002419!7.56e-13!18;CL:0000790!7.56e-13!18;CL:0000625!1.04e-08!11;CL:0000838!3.20e-07!52;CL:0000542!5.87e-07!53;CL:0000051!5.87e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000625;4.16e-12;11!CL:0000084;1.22e-10;25!CL:0000791;1.71e-09;18!CL:0000789;1.71e-09;18!CL:0002419;1.71e-09;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.47e-12,11;CL:0000084,1.27e-10,25;CL:0000827,1.27e-10,25;CL:0000791,1.29e-09,18;CL:0000789,1.29e-09,18;CL:0002420,1.29e-09,18;CL:0002419,1.29e-09,18;CL:0000790,1.29e-09,18 | |||
|ontology_enrichment_development_v019=CL:0000790;1.71e-09;18!UBERON:0006601;3.38e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.74e-24!115;UBERON:0001049!2.97e-22!57;UBERON:0005068!2.97e-22!57;UBERON:0006241!2.97e-22!57;UBERON:0007135!2.97e-22!57;UBERON:0005743!5.49e-20!86;UBERON:0002616!6.47e-20!59;UBERON:0002780!1.51e-19!41;UBERON:0001890!1.51e-19!41;UBERON:0006240!1.51e-19!41;UBERON:0001893!1.85e-19!34;UBERON:0002020!2.84e-19!34;UBERON:0003528!2.84e-19!34;UBERON:0000955!4.50e-19!69;UBERON:0006238!4.50e-19!69;UBERON:0003080!7.76e-19!42;UBERON:0002791!1.70e-18!33;UBERON:0000073!1.09e-17!94;UBERON:0001016!1.09e-17!94;UBERON:0001017!1.37e-17!82;UBERON:0001869!2.06e-17!32;UBERON:0000153!6.33e-15!129;UBERON:0007811!6.33e-15!129;UBERON:0003075!1.25e-13!86;UBERON:0007284!1.25e-13!86;UBERON:0003056!1.51e-13!61;UBERON:0002346!1.94e-12!90;UBERON:0002619!7.53e-12!22;UBERON:0000033!1.41e-11!123;UBERON:0002308!5.78e-11!9;UBERON:0000125!5.78e-11!9;UBERON:0000956!5.95e-11!25;UBERON:0000203!5.95e-11!25;UBERON:0002420!1.08e-10!9;UBERON:0007245!1.08e-10!9;UBERON:0010009!1.08e-10!9;UBERON:0010011!1.08e-10!9;UBERON:0000454!1.08e-10!9;UBERON:0001950!3.52e-10!20;UBERON:0009663!4.53e-09!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.93e-15;41!UBERON:0001890;1.93e-15;41!UBERON:0001893;8.13e-15;34!UBERON:0002420;2.20e-14;9!UBERON:0000125;2.20e-14;9!UBERON:0007245;2.20e-14;9!UBERON:0002308;2.20e-14;9!UBERON:0010009;2.20e-14;9!UBERON:0010011;2.20e-14;9!UBERON:0000454;2.20e-14;9!UBERON:0000073;3.15e-14;53!UBERON:0002616;3.15e-14;53!UBERON:0009663;3.19e-13;7!UBERON:0003528;4.28e-13;34!UBERON:0002020;4.28e-13;34!UBERON:0002791;6.18e-12;32!UBERON:0001869;6.59e-12;32!UBERON:0000955;2.53e-10;68!UBERON:0000200;6.36e-10;6!UBERON:0001875;8.65e-09;2!UBERON:0006514;8.65e-09;2!UBERON:0002370;1.07e-08;2!UBERON:0001897;1.07e-08;2!UBERON:0005058;1.07e-08;2!UBERON:0010225;1.07e-08;2!UBERON:0009113;1.07e-08;2!UBERON:0001017;1.33e-08;75!UBERON:0005162;2.89e-08;2!UBERON:0000122;2.89e-08;2!UBERON:0001016;4.93e-08;83!UBERON:0001950;1.42e-07;20!UBERON:0007023;2.96e-07;114!UBERON:0001872;4.18e-07;5!UBERON:0002619;7.84e-07;22!UBERON:0004732;8.68e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.93e-25,53;UBERON:0002616,3.93e-25,53;UBERON:0001049,1.58e-23,56;UBERON:0005068,1.58e-23,56;UBERON:0006241,1.58e-23,56;UBERON:0007135,1.58e-23,56;UBERON:0000955,2.27e-22,68;UBERON:0006238,2.27e-22,68;UBERON:0007023,6.92e-22,114;UBERON:0002780,1.15e-21,41;UBERON:0001890,1.15e-21,41;UBERON:0003080,1.15e-21,41;UBERON:0006240,1.15e-21,41;UBERON:0001017,5.81e-18,81;UBERON:0001893,1.53e-17,34;UBERON:0001016,2.78e-17,89;UBERON:0003075,3.61e-16,82;UBERON:0007284,3.61e-16,82;UBERON:0002346,3.54e-15,86;UBERON:0003056,3.79e-15,61;UBERON:0003528,5.54e-15,34;UBERON:0002020,5.54e-15,34;UBERON:0002420,5.90e-15,9;UBERON:0007245,5.90e-15,9;UBERON:0010009,5.90e-15,9;UBERON:0010011,5.90e-15,9;UBERON:0000454,5.90e-15,9;UBERON:0000125,1.49e-14,9;UBERON:0002308,1.49e-14,9;UBERON:0002791,1.06e-13,32;UBERON:0009663,1.34e-13,7;UBERON:0001869,1.34e-13,32;UBERON:0010371,1.15e-11,104;UBERON:0010314,3.15e-11,132;UBERON:0000200,6.00e-10,6;UBERON:0001875,4.90e-09,2;UBERON:0006514,4.90e-09,2;UBERON:0001897,6.68e-09,2;UBERON:0010225,6.68e-09,2;UBERON:0005162,2.09e-08,2;UBERON:0000122,2.09e-08,2;UBERON:0001950,1.19e-07,20;UBERON:0004121,2.82e-07,171;UBERON:0000924,2.82e-07,171;UBERON:0006601,2.82e-07,171;UBERON:0001872,5.00e-07,5;UBERON:0002619,6.68e-07,22;UBERON:0004732,8.63e-07,13;UBERON:0011216,9.18e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.229240217243854,0.164201178899891,0.236132343941038,0,0,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0.32389366601898,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0.786021525498329,0.411202997999018,1.17030546773475,1.30368906653436,0.473447805734733,1.94826728407911,0.668462741311041,0.589211814949674,1.32920336750173,0.541607727530031,2.5618263945135,1.69077151827842,0.822189523018381,0.552700035571697,0.289803085735052,0.444859689486181,0.267540828089713,2.09071047609954,0.679856056185397,0.383220493601921,0.34362744548263,1.26509846009751,1.59282707162048,0,0.950452044448374,1.35517607169996,1.79181255616186,2.49861453104692,2.36777252044017,4.10563998460523,0.201606743224732,0,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.365921118388786,0.265059536642971,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0,0,0.0895585227028483,0,0,0.492663237895943,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896681151948218,0,0,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0.261435451024901,0.256450125116389,0.328014645699706,0.325378394664303,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,1.01489521846434,0,0.569647187174163,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0,0,1.28055318027145,0.318852545457645,0.59873811429845,0,0.423347165447766,0,0,0,0,0,1.01575066680962,0,0,0,0,0,0,0,0,0.556812347790485,0,1.89318974933188,0,0,0,0,0,0,0.568272293612826,0,0,0,1.9882952955326,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,1.20598527610407,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.60298219312704,1.52581736317083,0.110579259931225,0.886642856860642,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,1.02193298195737,0,1.16348177330109,0.225595660617181,0.784250137270958,1.00692952185506,0,0.158936578980379,0,0,0.141353071433941,0,0.995261931078505,0,0,0.296521128680622,0,0.104421949505455,1.41542379259422,0.802577647298789,2.34264445725339,0,0,0,0,0,0,0,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,1.35588444468319,0.137041924646751,0,1.2029051231617,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0.101998217636322,0,3.00210144354895,1.77976992559591,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0.295282444544246,0,0.795229689809303,0.817220436669454,0.160753148465019,0.550157746388935,0.83088067605837,0,0,0.91124334987037,0,0.472834243795189,0.891727998294968,0,0,0,0,0,0,0,0,0,0,0.738832686744051,0,0,0,0,0.775697738169303,1.05786081394152,0,0,0.106787412567695,0.157204305099666,0,0,0,0.365377795142688,0,0,0,0,0,0.157054096250234,0,0.610131324509816,1.6274820991845,0,1.33114861844223,1.4903136705932,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0.79994958341972,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,1.34881372702565,0,0.957803154342908,0.615349092722265,0,0.96820153449905,1.13032951942296,1.42769420259154,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,1.14813893851271,0.781078098613847,1.2401207790071,1.33173201407204,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.883606528698812,1.38122824481983,0.118193840883968,0,0,0.471346769748006,0.280272163313789,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,2.58971534875158,1.95059333026869,0,0,0,0,0,0.33883824611688,0,0,0.308696632431779,0,0,0,0,0.196308467114945,0,0,0,0,0.257831551894309,0,0,0,0,0,0,1.43339583151451,0,0.747906392100062,0,0,0,0,0,0,0,1.14028650910293,0.917899467677836,0.534434810531121,0.275684698604535,0.250707539292375,0,0,1.65833887891756,2.48239190068549,2.13233981900981,0.476128862927481,1.0980114672121,2.04846557176331,0,0.318235791390825,0.606351566874658,1.52401723527873,0.342233301085281,0.26940821205835,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p3@uc001ijl.2 | |||
}} |
Latest revision as of 14:49, 23 July 2015
Short description: | p3@uc001ijl.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_uc001ijl.2_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_uc001ijl.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.47e-12 | 11 |
T cell | 1.27e-10 | 25 |
pro-T cell | 1.27e-10 | 25 |
mature alpha-beta T cell | 1.29e-09 | 18 |
alpha-beta T cell | 1.29e-09 | 18 |
immature T cell | 1.29e-09 | 18 |
mature T cell | 1.29e-09 | 18 |
immature alpha-beta T cell | 1.29e-09 | 18 |