FFCP PHASE1:Hg19::chr10:63819449..63819458,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:63819449..63819458,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:63819449..63819458,+ | |||
|id=chr10:63819449..63819458,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.23e-107!42;CL:0000860!3.03e-99!45;CL:0002194!8.71e-71!63;CL:0000576!8.71e-71!63;CL:0000040!8.71e-71!63;CL:0000559!8.71e-71!63;CL:0002009!2.38e-68!65;CL:0000766!1.81e-67!76;CL:0000839!2.68e-66!70;CL:0000557!3.05e-65!71;CL:0000763!9.32e-43!112;CL:0000049!9.32e-43!112;CL:0002087!6.19e-42!119;CL:0000738!3.30e-40!140;CL:0002031!2.09e-35!124;CL:0000037!8.49e-31!172;CL:0000566!8.49e-31!172;CL:0000988!1.56e-28!182;CL:0002032!2.00e-27!165;CL:0000837!2.00e-27!165;CL:0000134!2.83e-15!358;CL:0002320!9.25e-15!365;CL:0002393!5.01e-13!9;CL:0002397!5.01e-13!9;CL:0000219!5.98e-13!390;CL:0000842!4.27e-11!3;CL:0000034!8.01e-11!444;CL:0000048!8.72e-11!430;CL:0000723!1.77e-10!436;CL:0000224!2.00e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.00e-86;33!CL:0002057;3.00e-86;33!CL:0000473;6.16e-60;39!CL:0000234;6.16e-60;39!CL:0000576;7.81e-42;48!CL:0000766;4.52e-27;69!CL:0002087;2.83e-14;104!CL:0000763;1.64e-12;100!CL:0000136;1.46e-08;13!CL:0000738;6.78e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.71e-87,42;CL:0002057,3.71e-87,42;CL:0000473,9.92e-76,48;CL:0000234,9.92e-76,48;CL:0002194,1.01e-59,59;CL:0000576,1.01e-59,59;CL:0000040,1.01e-59,59;CL:0000559,1.01e-59,59;CL:0002009,1.17e-57,61;CL:0000839,4.96e-53,66;CL:0000766,1.13e-52,72;CL:0000557,3.46e-52,67;CL:0000763,8.60e-34,108;CL:0000049,8.60e-34,108;CL:0002087,1.93e-31,115;CL:0000738,2.58e-28,136;CL:0002031,2.16e-27,120;CL:0000037,4.58e-22,168;CL:0002032,3.09e-21,161;CL:0000837,3.09e-21,161;CL:0000988,1.04e-20,177;CL:0000134,4.30e-12,354;CL:0002320,9.24e-12,361;CL:0000219,1.38e-10,386;CL:0000048,3.78e-09,427;CL:0000723,5.97e-09,433;CL:0000034,1.08e-08,441;CL:0000136,1.94e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002057;2.69e-63;42!CL:0000049;1.65e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.60e-57!80;UBERON:0002390!3.95e-53!102;UBERON:0003061!3.95e-53!102;UBERON:0001474!2.62e-52!86;UBERON:0002193!1.65e-47!112;UBERON:0004765!3.51e-43!101;UBERON:0001434!3.51e-43!101;UBERON:0002405!6.64e-39!115;UBERON:0002204!2.04e-22!167;UBERON:0003081!2.70e-22!216;UBERON:0002384!4.64e-14!375;UBERON:0000926!1.26e-07!448;UBERON:0004120!1.26e-07!448;UBERON:0006603!1.26e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.41e-45,76;UBERON:0001474,5.77e-42,82;UBERON:0004765,6.88e-38,90;UBERON:0002390,1.28e-37,98;UBERON:0003061,1.28e-37,98;UBERON:0002405,1.54e-36,93;UBERON:0002193,9.43e-34,108;UBERON:0001434,1.06e-33,100;UBERON:0002204,1.82e-18,167;UBERON:0003081,6.97e-16,203;UBERON:0002384,2.63e-11,371;UBERON:0000926,1.43e-08,315;UBERON:0004120,1.43e-08,315;UBERON:0006603,1.43e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.64794490238253,1.80490002723128,0.434021741431704,0,0,0,0.436194716338694,0.377875943688809,0.242584061187816,2.55671940596253,1.23350366406548,7.43295290148249,3.16461631554365,1.5369642391746,5.91205574721463,34.1298223929252,19.3645405075148,28.4395621848118,1.12945403725563,0.545812300115692,4.49446968890169,22.038040250705,7.38136762275015,12.7867425159808,0.329851300186716,0,0,2.32167390902867,1.70215567407342,4.9825779919646,4.52247597462138,0.521482918420201,6.73285418585862,1.21079900526674,5.15588690382591,4.43047342417238,0.211255286311942,0,0.209658645508376,0.336985893439485,0.150176892841506,0.803627933485401,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.72571360654893,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,2.72008901684737,4.5124180924086,10.7220951867212,15.082141012651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:63819449..63819458,+ | |||
}} |
Latest revision as of 14:37, 23 July 2015
Short description: | p@chr10:63819449..63819458, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:63819449..63819458, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.71e-87 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.71e-87 | 42 |
defensive cell | 9.92e-76 | 48 |
phagocyte | 9.92e-76 | 48 |
monopoietic cell | 1.01e-59 | 59 |
monocyte | 1.01e-59 | 59 |
monoblast | 1.01e-59 | 59 |
promonocyte | 1.01e-59 | 59 |
macrophage dendritic cell progenitor | 1.17e-57 | 61 |
myeloid lineage restricted progenitor cell | 4.96e-53 | 66 |
myeloid leukocyte | 1.13e-52 | 72 |
granulocyte monocyte progenitor cell | 3.46e-52 | 67 |
myeloid cell | 8.60e-34 | 108 |
common myeloid progenitor | 8.60e-34 | 108 |
nongranular leukocyte | 1.93e-31 | 115 |
leukocyte | 2.58e-28 | 136 |
hematopoietic lineage restricted progenitor cell | 2.16e-27 | 120 |
hematopoietic stem cell | 4.58e-22 | 168 |
hematopoietic oligopotent progenitor cell | 3.09e-21 | 161 |
hematopoietic multipotent progenitor cell | 3.09e-21 | 161 |
hematopoietic cell | 1.04e-20 | 177 |
mesenchymal cell | 4.30e-12 | 354 |
connective tissue cell | 9.24e-12 | 361 |
motile cell | 1.38e-10 | 386 |
multi fate stem cell | 3.78e-09 | 427 |
somatic stem cell | 5.97e-09 | 433 |
stem cell | 1.08e-08 | 441 |
fat cell | 1.94e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.41e-45 | 76 |
bone element | 5.77e-42 | 82 |
skeletal element | 6.88e-38 | 90 |
hematopoietic system | 1.28e-37 | 98 |
blood island | 1.28e-37 | 98 |
immune system | 1.54e-36 | 93 |
hemolymphoid system | 9.43e-34 | 108 |
skeletal system | 1.06e-33 | 100 |
musculoskeletal system | 1.82e-18 | 167 |
lateral plate mesoderm | 6.97e-16 | 203 |
connective tissue | 2.63e-11 | 371 |
mesoderm | 1.43e-08 | 315 |
mesoderm-derived structure | 1.43e-08 | 315 |
presumptive mesoderm | 1.43e-08 | 315 |