FFCP PHASE1:Hg19::chr10:52011260..52011284,-: Difference between revisions
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|id=chr10:52011260..52011284,-
|short_description=p@chr10:52011260..52011284,-
|description=CAGE_peak_at_chr10:52011260..52011284,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:52011260..52011284,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_at_chr10:52011260..52011284,- | |||
|id=chr10:52011260..52011284,- | |||
|ontology_enrichment_celltype=CL:0000181!1.23e-09!12;CL:0000417!1.23e-09!12;CL:0000668!1.23e-09!12;CL:0000414!1.23e-09!12;CL:0000412!1.23e-09!12;CL:0000182!1.23e-09!12;CL:0002563!6.94e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.13e-20;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.24e-20,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.27e-13;11!UBERON:0009497;4.24e-11;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.77e-15!27;UBERON:0005409!1.02e-14!35;UBERON:0004921!2.93e-12!129;UBERON:0004185!2.93e-12!129;UBERON:0002240!6.22e-10!3;UBERON:0001007!1.16e-09!155;UBERON:0001555!1.16e-09!155;UBERON:0007026!1.16e-09!155;UBERON:0002107!4.37e-09!19;UBERON:0006925!4.37e-09!19;UBERON:0008836!4.37e-09!19;UBERON:0003929!5.79e-09!54;UBERON:0004119!1.36e-08!169;UBERON:0000925!1.36e-08!169;UBERON:0006595!1.36e-08!169;UBERON:0007029!3.33e-08!1;UBERON:0002108!6.04e-08!14;UBERON:0001242!6.94e-08!4;UBERON:0001262!6.94e-08!4;UBERON:0004786!6.94e-08!4;UBERON:0004808!6.94e-08!4;UBERON:0001277!6.94e-08!4;UBERON:0008835!8.15e-08!22;UBERON:0003894!8.15e-08!22;UBERON:0001155!1.12e-07!9;UBERON:0009854!1.82e-07!23;UBERON:0007499!7.55e-07!25;UBERON:0009497!7.55e-07!25;UBERON:0000015!7.55e-07!25;UBERON:0002423!7.55e-07!25;UBERON:0006235!7.55e-07!25;UBERON:0004161!7.55e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.32e-28;4!UBERON:0005409;6.02e-24;22!UBERON:0000160;1.54e-21;17!UBERON:0004921;1.21e-14;33!UBERON:0002107;5.09e-13;19!UBERON:0006925;5.09e-13;19!UBERON:0002423;5.74e-10;25!UBERON:0001155;8.60e-08;9!UBERON:0002365;1.07e-07;31!UBERON:0002330;1.07e-07;31!UBERON:0000949;1.09e-07;43!UBERON:0001007;2.17e-07;81!UBERON:0002368;4.81e-07;33!UBERON:0001555;5.53e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.32e-28,4;UBERON:0000160,1.47e-21,17;UBERON:0005409,3.47e-21,25;UBERON:0002107,5.25e-13,19;UBERON:0006925,5.25e-13,19;UBERON:0008836,5.25e-13,19;UBERON:0004921,6.08e-12,118;UBERON:0008835,2.82e-11,22;UBERON:0003894,2.82e-11,22;UBERON:0009854,8.47e-11,23;UBERON:0007499,5.88e-10,25;UBERON:0009497,5.88e-10,25;UBERON:0000015,5.88e-10,25;UBERON:0002423,5.88e-10,25;UBERON:0006235,5.88e-10,25;UBERON:0004161,5.88e-10,25;UBERON:0009856,1.38e-09,26;UBERON:0001007,1.50e-09,145;UBERON:0001555,1.50e-09,145;UBERON:0007026,1.50e-09,145;UBERON:0004119,1.45e-08,160;UBERON:0000925,1.45e-08,160;UBERON:0006595,1.45e-08,160;UBERON:0000949,1.99e-08,45;UBERON:0002365,4.43e-08,31;UBERON:0002330,4.43e-08,31;UBERON:0001155,8.31e-08,9;UBERON:0002368,3.49e-07,35;UBERON:0011216,4.22e-07,223 | |||
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|short_description=p@chr10:52011260..52011284,- | |||
}} | }} |
Latest revision as of 14:05, 23 July 2015
Short description: | p@chr10:52011260..52011284, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:52011260..52011284, - |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.24e-20 | 12 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.32e-28 | 4 |
intestine | 1.47e-21 | 17 |
gastrointestinal system | 3.47e-21 | 25 |
liver | 5.25e-13 | 19 |
digestive gland | 5.25e-13 | 19 |
liver bud | 5.25e-13 | 19 |
subdivision of digestive tract | 6.08e-12 | 118 |
hepatic diverticulum | 2.82e-11 | 22 |
liver primordium | 2.82e-11 | 22 |
digestive tract diverticulum | 8.47e-11 | 23 |
epithelial sac | 5.88e-10 | 25 |
epithelium of foregut-midgut junction | 5.88e-10 | 25 |
anatomical boundary | 5.88e-10 | 25 |
hepatobiliary system | 5.88e-10 | 25 |
foregut-midgut junction | 5.88e-10 | 25 |
septum transversum | 5.88e-10 | 25 |
sac | 1.38e-09 | 26 |
digestive system | 1.50e-09 | 145 |
digestive tract | 1.50e-09 | 145 |
primitive gut | 1.50e-09 | 145 |
endoderm-derived structure | 1.45e-08 | 160 |
endoderm | 1.45e-08 | 160 |
presumptive endoderm | 1.45e-08 | 160 |
endocrine system | 1.99e-08 | 45 |
exocrine gland | 4.43e-08 | 31 |
exocrine system | 4.43e-08 | 31 |
colon | 8.31e-08 | 9 |
endocrine gland | 3.49e-07 | 35 |
organ system subdivision | 4.22e-07 | 223 |