FFCP PHASE1:Hg19::chr10:4823152..4823165,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:4823152..4823165,- | |||
|coexpression_cluster_id=C3021 | |||
|description=CAGE_peak_at_chr10:4823152..4823165,- | |description=CAGE_peak_at_chr10:4823152..4823165,- | ||
|id=chr10:4823152..4823165,- | |id=chr10:4823152..4823165,- | ||
|ontology_enrichment_celltype=CL:0002139!3.13e-30!24;CL:0000115!7.08e-22!35;CL:0000071!8.85e-19!18;CL:0002546!8.85e-19!18;CL:0002078!1.80e-16!44;CL:1000413!4.63e-16!9;CL:0005020!6.48e-14!6;CL:0002138!6.48e-14!6;CL:0005022!6.48e-14!6;CL:0000222!8.53e-12!119;CL:0000213!1.03e-11!57;CL:0000215!1.03e-11!57;CL:0002620!1.90e-10!23;CL:0000220!8.71e-09!246;CL:0002544!1.03e-08!6;CL:0002321!1.21e-08!248;CL:0002551!4.35e-08!6;CL:1000306!1.40e-07!4;CL:0002547!1.40e-07!4;CL:0000569!1.96e-07!4;CL:0000011!1.96e-07!4;CL:0000055!6.78e-07!180 | |ontology_enrichment_celltype=CL:0002139!3.13e-30!24;CL:0000115!7.08e-22!35;CL:0000071!8.85e-19!18;CL:0002546!8.85e-19!18;CL:0002078!1.80e-16!44;CL:1000413!4.63e-16!9;CL:0005020!6.48e-14!6;CL:0002138!6.48e-14!6;CL:0005022!6.48e-14!6;CL:0000222!8.53e-12!119;CL:0000213!1.03e-11!57;CL:0000215!1.03e-11!57;CL:0002620!1.90e-10!23;CL:0000220!8.71e-09!246;CL:0002544!1.03e-08!6;CL:0002321!1.21e-08!248;CL:0002551!4.35e-08!6;CL:1000306!1.40e-07!4;CL:0002547!1.40e-07!4;CL:0000569!1.96e-07!4;CL:0000011!1.96e-07!4;CL:0000055!6.78e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002138;2.36e-63;6!CL:0002139;8.80e-40;24!CL:0000115;1.00e-21;36!CL:0002078;1.85e-15;45!CL:0000213;2.19e-13;58!CL:0000215;2.19e-13;58!CL:0002544;4.84e-11;6!CL:0000071;3.65e-08;18!CL:1000413;1.16e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,3.26e-63,6;CL:0002138,3.26e-63,6;CL:0005022,3.26e-63,6;CL:0002139,1.05e-39,24;CL:0000115,2.53e-26,36;CL:0002078,5.87e-21,45;CL:0000213,3.89e-16,58;CL:0000215,3.89e-16,58;CL:0002544,4.84e-11,6;CL:0000071,3.75e-08,18;CL:0002546,3.75e-08,18;CL:1000413,1.17e-07,9;CL:0000222,2.18e-07,121 | |||
|ontology_enrichment_development_v019=CL:0005022;2.36e-63;6!CL:0002546;3.65e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p@chr10:4823152..4823165,- | |short_description=p@chr10:4823152..4823165,- | ||
}} | }} |
Latest revision as of 13:53, 23 July 2015
Short description: | p@chr10:4823152..4823165, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:4823152..4823165, - |
Coexpression cluster: | C3021_large_Fibroblast_giant_Lymphatic_medulloblastoma_Endothelial_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 3.26e-63 | 6 |
endothelial cell of lymphatic vessel | 3.26e-63 | 6 |
vascular lymphangioblast | 3.26e-63 | 6 |
endothelial cell of vascular tree | 1.05e-39 | 24 |
endothelial cell | 2.53e-26 | 36 |
meso-epithelial cell | 5.87e-21 | 45 |
lining cell | 3.89e-16 | 58 |
barrier cell | 3.89e-16 | 58 |
aortic endothelial cell | 4.84e-11 | 6 |
blood vessel endothelial cell | 3.75e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.75e-08 | 18 |
endothelial cell of artery | 1.17e-07 | 9 |
mesodermal cell | 2.18e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.71e-47 | 8 |
lymph vasculature | 1.71e-47 | 8 |
lymphatic part of lymphoid system | 1.71e-47 | 8 |
lymphoid system | 4.73e-38 | 10 |
vessel | 2.62e-17 | 68 |
vasculature | 5.40e-15 | 78 |
vascular system | 5.40e-15 | 78 |
cardiovascular system | 1.68e-10 | 109 |
circulatory system | 3.38e-10 | 112 |
blood vessel endothelium | 3.75e-08 | 18 |
endothelium | 3.75e-08 | 18 |
cardiovascular system endothelium | 3.75e-08 | 18 |
endothelial tube | 1.17e-07 | 9 |
arterial system endothelium | 1.17e-07 | 9 |
endothelium of artery | 1.17e-07 | 9 |
aorta | 4.32e-07 | 21 |
aortic system | 4.32e-07 | 21 |
simple squamous epithelium | 9.14e-07 | 22 |