FFCP PHASE1:Hg19::chr10:4720389..4720416,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-43bp_to_ENST00000430998_5end | |association_with_transcript=-43bp_to_ENST00000430998_5end | ||
|cluster_id=chr10:4720389..4720416,- | |||
|coexpression_cluster_id=C1584 | |coexpression_cluster_id=C1584 | ||
|description=CAGE_peak_1_at_ENST00000430998_5end | |description=CAGE_peak_1_at_ENST00000430998_5end | ||
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|ontology_enrichment_celltype=CL:0002139!5.04e-21!24;CL:0000222!7.57e-21!119;CL:0000220!1.55e-18!246;CL:0002321!4.63e-18!248;CL:0000115!1.77e-17!35;CL:0000071!8.02e-17!18;CL:0002546!8.02e-17!18;CL:0000213!2.23e-15!57;CL:0000215!2.23e-15!57;CL:0000076!8.30e-15!62;CL:0002078!1.08e-13!44;CL:0000548!1.50e-12!679;CL:0000004!1.50e-12!679;CL:0000255!1.50e-12!679;CL:0000066!2.58e-12!254;CL:0000012!3.75e-12!682;CL:0000055!2.76e-11!180;CL:0002371!3.18e-09!591;CL:1000413!3.81e-09!9;CL:0000144!8.14e-09!625;CL:0000057!3.43e-08!75;CL:0000003!1.16e-07!722;CL:0002543!5.35e-07!6;CL:0000680!5.68e-07!57;CL:0000056!5.68e-07!57;CL:0000355!5.68e-07!57;CL:0002544!6.92e-07!6;CL:0002076!8.39e-07!43 | |ontology_enrichment_celltype=CL:0002139!5.04e-21!24;CL:0000222!7.57e-21!119;CL:0000220!1.55e-18!246;CL:0002321!4.63e-18!248;CL:0000115!1.77e-17!35;CL:0000071!8.02e-17!18;CL:0002546!8.02e-17!18;CL:0000213!2.23e-15!57;CL:0000215!2.23e-15!57;CL:0000076!8.30e-15!62;CL:0002078!1.08e-13!44;CL:0000548!1.50e-12!679;CL:0000004!1.50e-12!679;CL:0000255!1.50e-12!679;CL:0000066!2.58e-12!254;CL:0000012!3.75e-12!682;CL:0000055!2.76e-11!180;CL:0002371!3.18e-09!591;CL:1000413!3.81e-09!9;CL:0000144!8.14e-09!625;CL:0000057!3.43e-08!75;CL:0000003!1.16e-07!722;CL:0002543!5.35e-07!6;CL:0000680!5.68e-07!57;CL:0000056!5.68e-07!57;CL:0000355!5.68e-07!57;CL:0002544!6.92e-07!6;CL:0002076!8.39e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.26e-33;24!CL:0000071;1.26e-28;18!CL:0000115;6.21e-25;36!CL:0002078;5.91e-16;45!CL:1000413;5.58e-15;9!CL:0000213;1.70e-13;58!CL:0000215;1.70e-13;58!CL:0002543;3.49e-11;6!CL:0002544;5.31e-11;6!CL:0000076;2.44e-09;63!CL:0002138;7.10e-07;6 | |ontology_enrichment_celltype_v019=CL:0002139;1.26e-33;24!CL:0000071;1.26e-28;18!CL:0000115;6.21e-25;36!CL:0002078;5.91e-16;45!CL:1000413;5.58e-15;9!CL:0000213;1.70e-13;58!CL:0000215;1.70e-13;58!CL:0002543;3.49e-11;6!CL:0002544;5.31e-11;6!CL:0000076;2.44e-09;63!CL:0002138;7.10e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.11e-33,24;CL:0000115,1.26e-29,36;CL:0000071,1.69e-28,18;CL:0002546,1.69e-28,18;CL:0002078,2.00e-25,45;CL:0000213,1.79e-20,58;CL:0000215,1.79e-20,58;CL:1000413,6.23e-15,9;CL:0000076,1.27e-14,63;CL:0000222,1.57e-14,121;CL:0002321,7.43e-14,250;CL:0000066,1.54e-13,253;CL:0002543,3.71e-11,6;CL:0002544,5.83e-11,6;CL:0005020,8.63e-07,6;CL:0002138,8.63e-07,6;CL:0005022,8.63e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.26e-28;18!CL:0005022;7.10e-07;6 | |ontology_enrichment_development_v019=CL:0002546;1.26e-28;18!CL:0005022;7.10e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;3.65e-09;14!DOID:193;3.22e-07;29!DOID:120;9.11e-07;27 | |ontology_enrichment_disease_v019=DOID:2394;3.65e-09;14!DOID:193;3.22e-07;29!DOID:120;9.11e-07;27 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,2.23e-09,14;DOID:193,2.46e-07,29;DOID:120,7.19e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0000055!9.88e-23!69;UBERON:0002049!2.20e-21!79;UBERON:0007798!2.20e-21!79;UBERON:0001981!9.40e-21!60;UBERON:0007500!9.40e-21!60;UBERON:0004537!9.40e-21!60;UBERON:0006965!9.40e-21!60;UBERON:0004872!6.74e-19!84;UBERON:0001986!8.02e-17!18;UBERON:0004638!8.02e-17!18;UBERON:0004852!8.02e-17!18;UBERON:0004535!2.24e-16!110;UBERON:0000487!6.91e-16!22;UBERON:0001009!2.58e-15!113;UBERON:0003914!7.70e-15!118;UBERON:0000490!5.51e-14!138;UBERON:0001637!5.51e-14!42;UBERON:0003509!5.51e-14!42;UBERON:0004572!5.51e-14!42;UBERON:0006914!6.99e-13!25;UBERON:0004573!1.46e-12!33;UBERON:0004571!1.46e-12!33;UBERON:0000947!2.20e-12!21;UBERON:0010191!2.20e-12!21;UBERON:0000486!5.93e-10!82;UBERON:0002100!2.92e-09!216;UBERON:0003915!3.81e-09!9;UBERON:0004700!3.81e-09!9;UBERON:0001917!3.81e-09!9;UBERON:0000914!2.47e-08!83;UBERON:0002329!2.47e-08!83;UBERON:0003077!2.47e-08!83;UBERON:0003059!2.47e-08!83;UBERON:0007282!2.47e-08!83;UBERON:0009618!2.47e-08!83;UBERON:0007285!2.47e-08!83;UBERON:0000467!9.99e-08!625;UBERON:0000480!1.27e-07!626;UBERON:0005256!1.38e-07!143;UBERON:0004111!2.88e-07!241;UBERON:0004290!3.38e-07!70;UBERON:0003102!4.09e-07!95;UBERON:0000926!5.82e-07!448;UBERON:0004120!5.82e-07!448;UBERON:0006603!5.82e-07!448;UBERON:0003104!8.18e-07!238;UBERON:0009142!8.18e-07!238;UBERON:0000468!8.67e-07!659 | |ontology_enrichment_uberon=UBERON:0000055!9.88e-23!69;UBERON:0002049!2.20e-21!79;UBERON:0007798!2.20e-21!79;UBERON:0001981!9.40e-21!60;UBERON:0007500!9.40e-21!60;UBERON:0004537!9.40e-21!60;UBERON:0006965!9.40e-21!60;UBERON:0004872!6.74e-19!84;UBERON:0001986!8.02e-17!18;UBERON:0004638!8.02e-17!18;UBERON:0004852!8.02e-17!18;UBERON:0004535!2.24e-16!110;UBERON:0000487!6.91e-16!22;UBERON:0001009!2.58e-15!113;UBERON:0003914!7.70e-15!118;UBERON:0000490!5.51e-14!138;UBERON:0001637!5.51e-14!42;UBERON:0003509!5.51e-14!42;UBERON:0004572!5.51e-14!42;UBERON:0006914!6.99e-13!25;UBERON:0004573!1.46e-12!33;UBERON:0004571!1.46e-12!33;UBERON:0000947!2.20e-12!21;UBERON:0010191!2.20e-12!21;UBERON:0000486!5.93e-10!82;UBERON:0002100!2.92e-09!216;UBERON:0003915!3.81e-09!9;UBERON:0004700!3.81e-09!9;UBERON:0001917!3.81e-09!9;UBERON:0000914!2.47e-08!83;UBERON:0002329!2.47e-08!83;UBERON:0003077!2.47e-08!83;UBERON:0003059!2.47e-08!83;UBERON:0007282!2.47e-08!83;UBERON:0009618!2.47e-08!83;UBERON:0007285!2.47e-08!83;UBERON:0000467!9.99e-08!625;UBERON:0000480!1.27e-07!626;UBERON:0005256!1.38e-07!143;UBERON:0004111!2.88e-07!241;UBERON:0004290!3.38e-07!70;UBERON:0003102!4.09e-07!95;UBERON:0000926!5.82e-07!448;UBERON:0004120!5.82e-07!448;UBERON:0006603!5.82e-07!448;UBERON:0003104!8.18e-07!238;UBERON:0009142!8.18e-07!238;UBERON:0000468!8.67e-07!659 | ||
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| ||
|short_description=p1@ENST00000430998 | |short_description=p1@ENST00000430998 | ||
}} | }} |
Latest revision as of 13:52, 23 July 2015
Short description: | p1@ENST00000430998 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000430998_5end |
Coexpression cluster: | C1584_Endothelial_prostate_Gingival_Prostate_lens_Urothelial_Mallassezderived |
Association with transcript: | -43bp_to_ENST00000430998_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.11e-33 | 24 |
endothelial cell | 1.26e-29 | 36 |
blood vessel endothelial cell | 1.69e-28 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.69e-28 | 18 |
meso-epithelial cell | 2.00e-25 | 45 |
lining cell | 1.79e-20 | 58 |
barrier cell | 1.79e-20 | 58 |
endothelial cell of artery | 6.23e-15 | 9 |
squamous epithelial cell | 1.27e-14 | 63 |
mesodermal cell | 1.57e-14 | 121 |
embryonic cell | 7.43e-14 | 250 |
epithelial cell | 1.54e-13 | 253 |
vein endothelial cell | 3.71e-11 | 6 |
aortic endothelial cell | 5.83e-11 | 6 |
lymphangioblast | 8.63e-07 | 6 |
endothelial cell of lymphatic vessel | 8.63e-07 | 6 |
vascular lymphangioblast | 8.63e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.69e-28 | 18 |
endothelium | 1.69e-28 | 18 |
cardiovascular system endothelium | 1.69e-28 | 18 |
simple squamous epithelium | 7.45e-28 | 22 |
squamous epithelium | 1.13e-23 | 25 |
vessel | 1.98e-23 | 68 |
epithelial tube open at both ends | 2.27e-20 | 59 |
blood vessel | 2.27e-20 | 59 |
blood vasculature | 2.27e-20 | 59 |
vascular cord | 2.27e-20 | 59 |
vasculature | 6.87e-19 | 78 |
vascular system | 6.87e-19 | 78 |
splanchnic layer of lateral plate mesoderm | 1.07e-17 | 83 |
epithelial tube | 3.11e-17 | 117 |
aorta | 3.62e-16 | 21 |
aortic system | 3.62e-16 | 21 |
cardiovascular system | 2.08e-15 | 109 |
endothelial tube | 6.23e-15 | 9 |
arterial system endothelium | 6.23e-15 | 9 |
endothelium of artery | 6.23e-15 | 9 |
circulatory system | 1.18e-14 | 112 |
artery | 2.22e-13 | 42 |
arterial blood vessel | 2.22e-13 | 42 |
arterial system | 2.22e-13 | 42 |
systemic artery | 6.41e-11 | 33 |
systemic arterial system | 6.41e-11 | 33 |
unilaminar epithelium | 3.45e-09 | 148 |
female gonad | 3.05e-08 | 13 |
anatomical conduit | 9.48e-08 | 240 |
female organism | 2.54e-07 | 41 |
vein | 4.85e-07 | 9 |
venous blood vessel | 4.85e-07 | 9 |
venous system | 4.85e-07 | 9 |
left ovary | 9.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.23e-09 | 14 |
reproductive organ cancer | 2.46e-07 | 29 |
female reproductive organ cancer | 7.19e-07 | 27 |